| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1821389 | 211 (0.590) | 9 (0.030) | 7/94 | NT | 5.1% | coding (1128/1344 nt) | astB | succinylarginine dihydrolase |
| ? | CP009273 | = 1821423 | 160 (0.530) | coding (1094/1344 nt) | astB | succinylarginine dihydrolase | |||||
Only 100 of 357 total aligned reads displayed.
CCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCA > CP009273/1821322‑1821455 | ccACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGT < 1:23043141‑M1/68‑1 (MQ=255) cACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGtt < 1:17952494/68‑1 (MQ=255) cACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGtt < 1:22340938/68‑1 (MQ=255) cACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGtt < 1:13128369/68‑1 (MQ=255) cccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct > 1:9348852/1‑68 (MQ=255) cccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct < 1:24779077/68‑1 (MQ=255) cccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct < 1:7282733/68‑1 (MQ=255) ccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCCCCGCCCGGCGttct > 1:19043559/1‑67 (MQ=255) ccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct > 1:417705/1‑67 (MQ=255) ccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct > 1:14254367/1‑67 (MQ=255) ccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct > 1:16333408/1‑67 (MQ=255) ccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct > 1:13291219/1‑67 (MQ=255) aGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttct > 1:5363836/1‑68 (MQ=255) gTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttct > 1:2913338/1‑67 (MQ=255) gTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttct > 1:10643043/1‑67 (MQ=255) tCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttct > 1:14416816/1‑66 (MQ=255) cATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCACGGCGttcttct > 1:3447382/1‑65 (MQ=255) aTTGAGCGCATTAAACAGCGTGTCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTg < 1:6235605/68‑1 (MQ=255) aTTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttct > 1:8945490/1‑64 (MQ=255) aTTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttct > 1:29494741/1‑64 (MQ=255) aTTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGgtcttct > 1:20814280/1‑64 (MQ=255) aTTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTg < 1:26856420/68‑1 (MQ=255) aTTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTg < 1:3067752/68‑1 (MQ=255) aTTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTg < 1:19668772/68‑1 (MQ=255) aTTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTg < 1:28548151/68‑1 (MQ=255) ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt < 1:14041732/68‑1 (MQ=255) ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt < 1:13750582/68‑1 (MQ=255) ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt < 1:12856312/68‑1 (MQ=255) ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt < 1:24610759/68‑1 (MQ=255) ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCACCCGGCGTTCTTCTTCTGt < 1:18089560/68‑1 (MQ=255) tGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTc > 1:24373859/1‑68 (MQ=255) tGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTc > 1:21075683/1‑68 (MQ=255) tGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTc > 1:26566518/1‑68 (MQ=255) aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCaa > 1:26215000/1‑68 (MQ=255) aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCaa > 1:15165618/1‑68 (MQ=255) aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCaa > 1:3185262/1‑68 (MQ=255) aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCaa > 1:19588334/1‑68 (MQ=255) aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCaa > 1:27274209/1‑68 (MQ=255) aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCaa > 1:10803283/1‑68 (MQ=255) aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCaa > 1:27559188/1‑68 (MQ=255) aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTACTGTCaa > 1:22847453/1‑68 (MQ=255) aGCGCATTAAACAGCGTATCGTTCATCATCACCGCAGGATACACCGCCCGGCGTTCTTCTTCTGTCaa > 1:17605968/1‑68 (MQ=255) gcATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATa < 1:11014722/67‑1 (MQ=255) aTTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATacc < 1:2983783/67‑1 (MQ=255) aCAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGc > 1:20324770/1‑68 (MQ=255) aCAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGc > 1:25331640/1‑68 (MQ=255) aCAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGc > 1:25157459/1‑68 (MQ=255) cAGCGTATCGTTCATCATCACCGCCGGATTCCCCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCa > 1:16956582/1‑68 (MQ=255) cAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCa > 1:29099557/1‑68 (MQ=255) cAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCa > 1:15682313/1‑68 (MQ=255) cAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCa > 1:16653003/1‑68 (MQ=255) cAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCa > 1:24085896/1‑68 (MQ=255) cAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTACTTCTGACAATACCCCCCGCa > 1:25063090/1‑68 (MQ=255) gTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAAc < 1:4422162/66‑1 (MQ=255) cGTTCATCTTCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAgg < 1:18676837/68‑1 (MQ=255) cGTGCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAgg < 1:28761139/68‑1 (MQ=255) gTTCATCATCACCGCCGGATTCACCGCCCGGCGTgcctgcgggtgggggtggttttgacagaagaaga > 1:28444961‑M1/1‑34 (MQ=255) gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATa > 1:9435727/1‑50 (MQ=255) gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCCCCCGCCACCGCCgg > 1:20015201/1‑67 (MQ=255) gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc > 1:1023126/1‑68 (MQ=255) gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc > 1:7092697/1‑68 (MQ=255) tcatcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCac < 1:2466852‑M2/68‑3 (MQ=255) catcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacg > 1:5690973‑M2/1‑65 (MQ=255) atcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:23504274‑M2/68‑8 (MQ=255) atcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:10493109‑M2/68‑8 (MQ=255) tcaCCGCCGGATTCACCGCCCGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgg > 1:13535407‑M1/1‑26 (MQ=255) tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccggg > 1:12571801‑M2/1‑60 (MQ=255) tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:29302518‑M2/67‑8 (MQ=255) tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACAGCAGGCacgccgg < 1:8579036‑M2/67‑8 (MQ=255) caCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgggc > 1:18700044‑M2/1‑59 (MQ=255) agcgcctGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc > 1:21563590/3‑68 (MQ=255) ccgccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgggcgg > 1:8224077‑M2/1‑57 (MQ=255) gccgGATTCCCCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgcc < 1:4950881/68‑1 (MQ=255) cgGATTCCCCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgggcggtga > 1:14783036‑M2/1‑53 (MQ=255) cgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccgc < 1:11748730/68‑1 (MQ=255) ggATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccgcc < 1:2175061/68‑1 (MQ=255) ggATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccgcc < 1:14567669/68‑1 (MQ=255) aTTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCAt > 1:27677924/1‑68 (MQ=255) tCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc < 1:11991815/68‑1 (MQ=255) tCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc > 1:3637121/1‑68 (MQ=255) tCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc < 1:15411355/68‑1 (MQ=255) tCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc < 1:16075769/68‑1 (MQ=255) cACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc > 1:22165772/1‑67 (MQ=255) cACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCg < 1:13864408/68‑1 (MQ=255) ccGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCCCGCCGGGCCGCCGCCATTCGc > 1:7588010/1‑67 (MQ=255) gCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCAt < 1:10378717/68‑1 (MQ=255) cccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtga > 1:7929630‑M1/1‑8 (MQ=255) ccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgat < 1:8093794‑M1/68‑62 (MQ=255) ccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtga < 1:18497988‑M1/67‑61 (MQ=255) ccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtga < 1:28142121‑M1/67‑61 (MQ=255) ccGGCGTgcctgcgggtgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgat < 1:2817619‑M1/68‑62 (MQ=255) ccGGCGTgccggcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtga < 1:22020716‑M1/67‑61 (MQ=255) ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc < 1:12751206/68‑1 (MQ=255) ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc < 1:7188289/68‑1 (MQ=255) ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc < 1:25959134/68‑1 (MQ=255) cGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCt < 1:8488137/68‑1 (MQ=255) gTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatgatga > 1:12175699‑M1/1‑2 (MQ=255) gTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatgatga < 1:16625957‑M1/68‑67 (MQ=255) gTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTc > 1:4614334/1‑67 (MQ=255) gTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCa < 1:23885147/68‑1 (MQ=255) | CCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCA > CP009273/1821322‑1821455 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |