| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1821389 | 211 (0.590) | 9 (0.030) | 7/94 | NT | 5.1% | coding (1128/1344 nt) | astB | succinylarginine dihydrolase |
| ? | CP009273 | = 1821423 | 160 (0.530) | coding (1094/1344 nt) | astB | succinylarginine dihydrolase | |||||
Only 100 of 249 total aligned reads displayed.
GTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTT > CP009273/1821356‑1821490 | gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc > 1:7138696/1‑68 (MQ=255) ttCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc > 1:12760767/1‑67 (MQ=255) tcatcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCac < 1:16625957‑M2/68‑3 (MQ=255) catcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacg > 1:14132506‑M2/1‑65 (MQ=255) catcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacg > 1:5690973‑M2/1‑65 (MQ=255) catcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacg > 1:22487927‑M2/1‑65 (MQ=255) attcatcaccGGCGGATTCACCGCCCGGCGTTCTTGTTCTGTCAATACCACCCGCAACCGCAGGCacg > 1:8955164‑M2/3‑65 (MQ=255) tcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgcc < 1:2101626‑M2/68‑6 (MQ=255) catcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccg < 1:3014812‑M2/68‑7 (MQ=255) atcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTGTGTCAATACCACCCGCAACCGCCGGCacgccgg < 1:10285522‑M2/68‑8 (MQ=255) atcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:8093794‑M2/68‑8 (MQ=255) atcaCCGCCGGATTCACCGCCCCGCGTGCTTCTTCTGTCACTTCCACCCGCAACCGCAGGCacgccgg > 1:20081058‑M2/1‑61 (MQ=255) tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:28142121‑M2/67‑8 (MQ=255) tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:18497988‑M2/67‑8 (MQ=255) tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:16870953‑M2/67‑8 (MQ=255) tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:15623239‑M2/67‑8 (MQ=255) tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACAGCAGGCacgccgg < 1:8579036‑M2/67‑8 (MQ=255) caCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgggc > 1:18700044‑M2/1‑59 (MQ=255) agcgcctGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc > 1:21563590/3‑68 (MQ=255) aCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc > 1:25890678/1‑68 (MQ=255) aCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc > 1:12708659/1‑68 (MQ=255) aCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc > 1:29317698/1‑68 (MQ=255) gccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgcc < 1:11749336/68‑1 (MQ=255) cgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccgc < 1:9387688/68‑1 (MQ=255) cgGATTCACCGCCCGGCGTTCTTCTTCAGTCAATACCACCCGCAACCGCAGGCacgccgggcggtga > 1:7505479‑M2/1‑53 (MQ=255) ggATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccgcc < 1:13658616/68‑1 (MQ=255) aTTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCAt > 1:4749118/1‑68 (MQ=255) aTTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCAt > 1:15399939/1‑68 (MQ=255) aTTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCAt > 1:27677924/1‑68 (MQ=255) aTTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCAt > 1:1216995/1‑68 (MQ=255) tCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc > 1:3637121/1‑68 (MQ=255) tCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc < 1:10418350/68‑1 (MQ=255) cACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCg < 1:17607700/68‑1 (MQ=255) ccGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGcc < 1:15282416/68‑1 (MQ=255) ccGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGcc < 1:19691213/68‑1 (MQ=255) ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgggcggtgaatccggcggtga > 1:13535407‑M2/1‑41 (MQ=255) ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATg < 1:11824134/67‑1 (MQ=255) cGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCt < 1:8488137/68‑1 (MQ=255) gggTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTGGGGATGCtt > 1:24932292/3‑67 (MQ=255) gTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTc > 1:10538262/1‑67 (MQ=255) gTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCa < 1:24145432/68‑1 (MQ=255) gTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCa < 1:23885147/68‑1 (MQ=255) ttcttctGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgcc < 1:28715837/45‑1 (MQ=255) tcttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTaa > 1:6267487/1‑68 (MQ=255) tcttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTaa > 1:1317216/1‑68 (MQ=255) tcttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTaa > 1:26264428/1‑68 (MQ=255) ttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCGGCCGCCATTCGCCATGCTTTCACGTAAAt < 1:1148935/68‑1 (MQ=255) ttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAAt < 1:13312165/68‑1 (MQ=255) ttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAAt < 1:15823434/68‑1 (MQ=255) ttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAAt < 1:1208174/68‑1 (MQ=255) tctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATc > 1:1838580/1‑68 (MQ=255) tctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATc > 1:28342350/1‑68 (MQ=255) tctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATc > 1:7100659/1‑68 (MQ=255) tctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATc > 1:26828063/1‑68 (MQ=255) tctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATc > 1:16466340/1‑68 (MQ=255) tctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATc > 1:17342386/1‑68 (MQ=255) tctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATc > 1:3477872/1‑68 (MQ=255) cAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGa < 1:17992723/68‑1 (MQ=255) cAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGa < 1:2792697/68‑1 (MQ=255) cAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGa < 1:15158308/68‑1 (MQ=255) cAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGa < 1:7827872/68‑1 (MQ=255) cAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGa > 1:1467543/1‑68 (MQ=255) cAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGAAAATCAAAGa < 1:8237546/68‑1 (MQ=255) aTACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACt > 1:13896118/1‑68 (MQ=255) aTACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACt > 1:22051348/1‑68 (MQ=255) aTACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACt < 1:10657873/68‑1 (MQ=255) aTACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACt > 1:10698844/1‑68 (MQ=255) tACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGa > 1:21527868/1‑65 (MQ=255) tACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtt > 1:330941/1‑68 (MQ=255) accaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGCCttt > 1:24788043/1‑68 (MQ=255) accaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACttt > 1:14955460/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:4846054/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:319960/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:29382388/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:18132883/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:25651928/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:24480618/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:22984344/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:2228677/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:21842999/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:10335214/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCAGTCGCCATGCTTTCACGTAATTCTAAGACtttt > 1:22201927/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGACGGGCCGCCGCCATTCGCCATGCTATCACGTAAATCAAAGACtata > 1:22739687/1‑65 (MQ=255) ccGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGt > 1:26051125/1‑67 (MQ=255) cGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTc < 1:11258406/68‑1 (MQ=255) cGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTc > 1:20862357/1‑68 (MQ=255) cAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTc > 1:5268595/1‑66 (MQ=255) cAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTc > 1:16986624/1‑66 (MQ=255) aaCCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCt < 1:4132464/68‑1 (MQ=255) aaCCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCt < 1:28766647/68‑1 (MQ=255) aaCCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCt < 1:2758580/68‑1 (MQ=255) aaCCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCt < 1:23356281/68‑1 (MQ=255) aaCCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCt < 1:10137035/68‑1 (MQ=255) aGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCg < 1:19077651/67‑1 (MQ=255) gCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGt > 1:6068283/1‑68 (MQ=255) gCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGt > 1:2605724/1‑68 (MQ=255) cACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCggg < 1:26386766/66‑1 (MQ=255) cACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCggg < 1:14360297/66‑1 (MQ=255) cACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGtt > 1:26634592/1‑68 (MQ=255) cACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGt < 1:28448181/67‑1 (MQ=255) | GTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTT > CP009273/1821356‑1821490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |