| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2323869 = | 327 (0.910) | 15 (0.050) | 6/94 | NT | 5.0% | pseudogene (4013/4605 nt) | yfaS | pseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein |
| ? | CP009273 | 2323928 = | 291 (0.960) | pseudogene (3954/4605 nt) | yfaS | pseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein | |||||
Only 100 of 113 total aligned reads displayed.
AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2323944‑2323869‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aactggaggCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCG > CP009273/2323928‑2323994 AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:21021886/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:10862127/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:19483611/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:18834388/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:4402725/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:11994499/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:3848041/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:18498811/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:15999619/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:28822233/68‑1AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:26914521/68‑1AATATAAGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA < 1:22084113/68‑1 ATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAA < 1:10283674/68‑1 ATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAA < 1:21763949/68‑1 ATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAA < 1:23666312/68‑1 ATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAA < 1:25670595/68‑1 ATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAA < 1:11256784/68‑1 ATATATCGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAA < 1:25252395/68‑1 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAAC < 1:10787708/68‑1 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAAC < 1:7560163/68‑1 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAAC < 1:1726663/68‑1 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:24549075/1‑66 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:10138667/1‑66 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:10417661/1‑66 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:24811477/1‑66 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:3734462/1‑66 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:15454973/1‑66 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:28258211/1‑66 TATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:27851157/1‑66 ATATGGCGACAATGCCTCCATTTGTTTTGCCTGCGCCTGGGGGCGCATTTTATAAACATAAGTTAAat < 1:24932557/68‑3 ATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACT < 1:24932562/68‑1 ATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:23973538/1‑65 ATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:12117148/1‑65 ATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTA > 1:19836963/1‑65 TATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTG < 1:18685860/68‑1 TATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTG < 1:27962363/68‑1 acGGCGACAATGCCGCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGG < 1:27179138/66‑1 ATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGG > 1:23782041/1‑68 ATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGG > 1:23031449/1‑68 ATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGG > 1:7130245/1‑68 ATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGG > 1:23551953/1‑68 ATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGG < 1:12053184/68‑1 tgcCGACACTGCCTCCCGTTGGTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGA < 1:24151979/65‑1 TGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGA > 1:26202076/1‑68 GGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAG > 1:15296010/1‑68 GGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAG > 1:13928229/1‑68 GGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAG > 1:28166724/1‑68 GGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAG > 1:19299954/1‑68 GGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAG > 1:22860743/1‑68 GGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAG > 1:22097310/1‑68 GCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG > 1:12931822/1‑68 GCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG > 1:7610246/1‑68 GCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG > 1:23657096/1‑68 GCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG > 1:13850947/1‑68 GCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG > 1:12895410/1‑68 GCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG > 1:4118777/1‑68 GCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG > 1:15648572/1‑68 CTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCGCC < 1:7288187/68‑1 CTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCGC < 1:4715119/67‑1 CTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCGC < 1:28447333/67‑1 CTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCGC < 1:11722619/67‑1 TGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCGCCATAT < 1:25440741/65‑1 TGTTTTGCCAGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCGCCATATA < 1:15561907/66‑1 cgGCGCCGGCGGGCGCATGGGCTAAACATAAGTAAACTGGAGGCATTGTCGCCATATATTTCGCCAG < 1:767943/65‑1 CTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCGCCATATATTTCGCCAG < 1:11319095/67‑1 CTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCGCCATATATTTCGCCAG < 1:6850454/67‑1 CTGCGCCTGCGGCCGCATGGGCTAAACATAAGTTAACTGGAGGCATTGTCGCCATATATTTCGCCAG < 1:16999153/67‑1 CTGCGCCGGCGGGCGCAGGGGCTAAACATAAGTTAACTGGAGGCATTGTCGCCATATATTTCGCCAG < 1:47835/67‑1 CTGCGGGCGCATGGGCTAAACATAAGTTAACTGGCGGCATTGTCGCCATATATTTCGCCAGCCAGTT < 1:14962207/67‑1 CTGCGGGCGCATGGGCTAAACATAAGTAACCTGGCGGCATTGGCGCCATATATTTCGCCAGCCAGTT < 1:22046165/67‑1 CTGCGGGCGCATGGGCTAAACATAAGTAAACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTT < 1:28124484/67‑1 CTGCGGGCGCATGGGCTAAACATAAGTAAACTGGAGGAATTGTCGCAATATTTTTCGCCAGCCAGTT < 1:7849897/67‑1 AACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATT > 1:21671911/1‑68 AACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATT < 1:10624668/68‑1 AACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATT > 1:26845960/1‑68 AACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATT < 1:26245175/68‑1 AACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGAGCTCAATAGTGGATT > 1:2850686/1‑68 ACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATT > 1:18443709/1‑67 ACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATT > 1:17224623/1‑67 ACTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATT > 1:29487271/1‑67 CTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGC < 1:21192322/68‑1 CTGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGC < 1:6380029/68‑1 TGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGC > 1:8283401/1‑67 TGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGC > 1:8577378/1‑67 TGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGC > 1:3844225/1‑67 TGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGC > 1:21466516/1‑67 TGGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCCCTCAATAGTGGATTGC > 1:16446587/1‑67 GGAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTC > 1:4082669/1‑68 GAGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCA > 1:21744225/1‑68 AGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGGTCAATAGTGGATTGCTCA > 1:20295583/1‑67 AGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCA > 1:3752131/1‑67 AGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCA > 1:29192975/1‑67 AGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCA > 1:14734282/1‑67 AGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCA > 1:26565337/1‑67 AGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCA > 1:22915417/1‑67 AGGCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCA > 1:22306049/1‑67 GCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCG > 1:3377557/1‑68 GCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCG > 1:14678725/1‑68 GCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCG > 1:20066921/1‑68 GCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATAGCTCAGCG > 1:24371457/1‑68 AATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2323944‑2323869‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aactggaggCATTGTCGCCATATATTTCGCCAGCCAGTTCATGGCCAGCGCGCGCTCAATAGTGGATTGCTCAGCG > CP009273/2323928‑2323994 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |