New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 3015939429 (1.190)29 (0.090) 12/96 NT 7.3% coding (1265/2871 nt) xdhD putative hypoxanthine oxidase, molybdopterin‑binding/Fe‑S binding
?CP009273 = 3015996 366 (1.190)coding (1322/2871 nt) xdhD putative hypoxanthine oxidase, molybdopterin‑binding/Fe‑S binding

Only 100 of 140 total aligned reads displayed.

CTGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3015865‑3015939
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccaACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGCGTA  <  CP009273/3015996‑3015930
                                                                                                                                              
CTGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTAC                                                                            >  1:15998657/1‑68
CTGCTTTACTCGTATGGACGGCGATAGTCTGGTTATCCACGCCTCCAACAAGGTACCATGGCACTTAC                                                                            >  1:1916786/1‑68
 TGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTAC                                                                            >  1:27569245/1‑67
 TGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTAC                                                                            >  1:4607255/1‑67
  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTCCCATGGCACTTACG                                                                           >  1:26668541/1‑67
  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                           >  1:13523799/1‑67
  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                           >  1:1590643/1‑67
  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                           >  1:22017357/1‑67
  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                           >  1:24499522/1‑67
  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                           >  1:13389577/1‑67
  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                           >  1:26407014/1‑67
  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                           >  1:25387097/1‑67
  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                           >  1:7865511/1‑67
  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCAACGCCTCCACCCAGGTACCATGGCACTTACG                                                                           >  1:24560093/1‑67
  GCTTTACTCGTATGGA‑GGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:5960392/68‑1
   CTTTACTCGTATGGAGGGCGATCGTCTGGTTATCCACGCCTCCACCCATGTACCATGGCACTTACGCC                                                                         <  1:23205313/68‑1
    TTTACTCGTATGGACGGCGTTCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         >  1:4270422/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACGATGGCACTTACGCC                                                                         >  1:20118304/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:19876710/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:24989853/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         >  1:261753/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:2099492/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         >  1:4518579/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:22003885/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:25940592/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:25580089/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         >  1:22006850/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:22189966/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:23982349/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:24474864/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:25574572/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:27098507/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:3430645/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         >  1:3284368/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:3225148/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:5148239/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         >  1:9655877/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         >  1:11281548/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:11283130/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         >  1:8894867/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         >  1:11859486/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:12288365/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:12537930/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         >  1:6696594/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:12920622/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:6515618/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:13523342/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:14217554/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:14348001/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         >  1:5847374/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         >  1:1495609/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:15201364/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:15313066/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         >  1:15407913/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:155802/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:5507624/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:5183829/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         >  1:19700/1‑67
    TTTACTCGTAAGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:29527914/67‑1
     TTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGC                                                                       <  1:12829724/68‑1
     TTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGC                                                                       <  1:16855733/68‑1
     TTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGC                                                                       <  1:5339120/68‑1
     TTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGC                                                                       <  1:9761398/68‑1
       ACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCA                                                                     >  1:10711446/1‑68
       ACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCA                                                                     >  1:10746723/1‑68
                 ACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                         <  1:19383401/54‑1
                              GGTTATCCACGCCTCCACCCCGGTACCATGGCACTTACGCCGCCCACTCGCTCGGTAATGACAGGA                                                >  1:7064216/1‑66
                              GGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCCACTCGCGGGTTAATGACAGGAAC                                              >  1:27955678/1‑68
                              GGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCACCTCGCGCTTTAATGACATGA                                                >  1:11359676/1‑66
                                                CCAGGTACCATGGCACTTACGCCGCCACCTCGCTCTGTAATGCCATGTACTTTTTGCGGTTTCATGC                             >  1:5467598/1‑67
                                                   GGTACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCAC                         >  1:28566847/1‑68
                                                    GTACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTTTGCTGTTTCATGCCCACG                        >  1:14889259/1‑68
                                                     TACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGA                       >  1:13126490/1‑68
                                                     TACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCA                          <  1:24807343/65‑1
                                                     TACCATGGCACTTACGCCGCCAACTCGCGCTTTAATGCGATGAACTTTATGCTGTTTCATGCCCCCGA                       >  1:28293385/1‑68
                                                      ACCATGGCACTTACGCCGCCCACTCGCTCTTTAATGACATGACCTTTTTGCTGTTTCATGGCCCCGAG                      >  1:28988998/1‑68
                                                      ACCATGGCACTTACGCCGCCAAGTCGCTCTTTAATGACATGCACGTTATGCTGTTTCATGCCCACGAG                      >  1:2692669/1‑68
                                                      ACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAG                      >  1:13084668/1‑68
                                                      ACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAG                      >  1:16665195/1‑68
                                                      ACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAG                      >  1:27874939/1‑68
                                                      ACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAG                      >  1:18281134/1‑68
                                                      ACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAG                      >  1:20137668/1‑68
                                                          TGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGC                  >  1:27156533/1‑68
                                                          TGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGC                  >  1:24719741/1‑68
                                                           GGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGC                  >  1:24701788/1‑67
                                                           GGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGC                  >  1:2984193/1‑67
                                                           GGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGC                  >  1:12613318/1‑67
                                                            gaACTTGCGCCGCCAACTCGCTCTTTAATGACATGCACTTTATGCTGTTTCATGGCCTGGAGGCGCGC                >  1:21568327/3‑68
                                                                  ACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCCCGCGGCGCGCGACCTG          >  1:3120396/1‑68
                                                                   CGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGG         <  1:9486982/68‑1
                                                                   CGCCGCCAACTCGCTCTTTAATGACATGAACATTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGG         <  1:28311559/68‑1
                                                                    GCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGC        >  1:11986055/1‑68
                                                                      CGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGG      <  1:22944942/68‑1
                                                                      CGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCG       >  1:9207698/1‑67
                                                                      CGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCG       <  1:27257114/67‑1
                                                                      CGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCG       <  1:17762206/67‑1
                                                                       GCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGC     <  1:816709/68‑1
                                                                       GCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGC     <  1:10253682/68‑1
                                                                         CAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGCG    <  1:25054350/67‑1
                                                                          AACTCGCTCTTTAATGACATGAACTTTATGCTGGTTCATGCCCACGAGGCGCGCGACCTGGCGGCGTA  <  1:27441188/68‑1
                                                                                                                                              
CTGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3015865‑3015939
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccaACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGCGTA  <  CP009273/3015996‑3015930

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.