| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3015939 | 429 (1.190) | 29 (0.090) | 12/96 | NT | 7.3% | coding (1265/2871 nt) | xdhD | putative hypoxanthine oxidase, molybdopterin‑binding/Fe‑S binding |
| ? | CP009273 | = 3015996 | 366 (1.190) | coding (1322/2871 nt) | xdhD | putative hypoxanthine oxidase, molybdopterin‑binding/Fe‑S binding | |||||
Only 100 of 474 total aligned reads displayed.
TACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTG > CP009273/3015930‑3016063 | ccAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcg < 1:9486982‑M2/68‑9 (MQ=255) cAGGTCGCGCGCCTCGGGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGcggcgg < 1:16162600/68‑1 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:23357438/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:16321542/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:5275252/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:7005138/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:5542515/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:5755763/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:13407994/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATCTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:23756607/1‑68 (MQ=255) cgcgcgCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTg > 1:7677937/1‑68 (MQ=255) gcgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGt < 1:384776/67‑1 (MQ=255) gcgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGt < 1:22449571/67‑1 (MQ=255) gcgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGt < 1:26536594/67‑1 (MQ=255) gcgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGt < 1:27458619/67‑1 (MQ=255) gcgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGt < 1:11021110/67‑1 (MQ=255) gcgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGt < 1:12253334/67‑1 (MQ=255) gcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTcc > 1:1245677/1‑68 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:12015222/68‑1 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:11612327/68‑1 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:16714036/68‑1 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:27274827/68‑1 (MQ=255) cTCGGGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgccatggt > 1:11189284‑M2/1‑47 (MQ=255) cTCGGGGCCATGAAACAGCAAAAAGGTCATGTCATTAAAGAGCGAGTgggcggcgtaagtgccatggt > 1:28988998‑M2/1‑47 (MQ=255) tCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGCGCGAGTtggcggcgtaagtgccatggta > 1:25710418‑M2/1‑46 (MQ=255) gTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgccatggtacc > 1:28566847‑M2/1‑44 (MQ=255) tGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgccatggta < 1:24807343‑M2/65‑23 (MQ=255) gggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAg < 1:11497942/67‑1 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:19168002/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:8160299/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:28393671/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:29180493/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:3001129/1‑67 (MQ=255) aTGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACa < 1:6255796/67‑1 (MQ=255) aaaCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACAt > 1:27893578/1‑65 (MQ=255) aaCAGCATAAAGTTCCTGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctg < 1:13783012/68‑1 (MQ=255) aaCAGCATAAAGTTCATGTCATTAAAGAGCGATTTGGCGGCGGTTTTGGTTCCAAACACGACATCct < 1:9658011/67‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:10297432/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:27776284/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:346278/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:12905469/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:21196684/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCct > 1:29474309/1‑66 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCct > 1:18307375/1‑66 (MQ=255) cATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga > 1:24430987/1‑68 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgctg < 1:28201683/65‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaa > 1:1599706/1‑68 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaa > 1:7200613/1‑68 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaa > 1:8947228/1‑68 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaa > 1:17981391/1‑68 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga < 1:411403/67‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga < 1:6564959/67‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga < 1:10031908/67‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga < 1:15419384/67‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga < 1:25092670/67‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga < 1:18615361/67‑1 (MQ=255) caaGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaaga < 1:3188142/67‑1 (MQ=255) aaGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaagaa > 1:11920963/1‑68 (MQ=255) aGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGaagaag < 1:22759306/68‑1 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:22124545/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:15718432/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:29605307/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:17189196/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:26065327/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:19375864/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:18837265/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCAGGAAGAAgt > 1:24137612/1‑68 (MQ=255) tGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg < 1:10766911/68‑1 (MQ=255) tGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg < 1:8464489/68‑1 (MQ=255) tGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg < 1:14864731/68‑1 (MQ=255) tGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgc > 1:21592252/1‑67 (MQ=255) gTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg > 1:14699277/1‑67 (MQ=255) tCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg > 1:19907908/1‑66 (MQ=255) tCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg > 1:1745846/1‑66 (MQ=255) tCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg > 1:20552099/1‑66 (MQ=255) cATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGcc < 1:24540740/67‑1 (MQ=255) aTTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTg < 1:20268899/68‑1 (MQ=255) ttAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTgg > 1:13114567/1‑68 (MQ=255) tAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTggg < 1:27635058/68‑1 (MQ=255) aaaGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGc > 1:14574784/1‑68 (MQ=255) aaaGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGc > 1:4862612/1‑68 (MQ=255) aaaGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGc > 1:20914643/1‑68 (MQ=255) aaGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:25339193/1‑68 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:2635487/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:7553798/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:12697695/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:6028708/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:13963907/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:14229725/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:1776531/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:23071487/1‑67 (MQ=255) gagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:9332052/1‑67 (MQ=255) agCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:15105461/1‑66 (MQ=255) agCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:26852760/1‑66 (MQ=255) agCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:27093375/1‑66 (MQ=255) agCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAAca > 1:1843857/1‑67 (MQ=255) gCGAGTtggcggcgtaagtgccatggtacctgggtggaggcgtggataaccagacgatcgccgtccat < 1:24485928‑M2/68‑63 (MQ=255) cGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCt > 1:24929756/1‑67 (MQ=255) aGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCg > 1:16494374/1‑68 (MQ=255) ttGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTg > 1:4359439/1‑68 (MQ=255) | TACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTG > CP009273/3015930‑3016063 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |