| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3263959 | 146 (0.410) | 8 (0.030) | 6/96 | NT | 5.5% | intergenic (‑8/+25) | rnpB/garK | RNase P, M1 RNA component/glycerate kinase I |
| ? | CP009273 | = 3263971 | 148 (0.480) | intergenic (‑20/+13) | rnpB/garK | RNase P, M1 RNA component/glycerate kinase I | |||||
TCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3263887‑3263959‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgcaAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTCGGGGGA < CP009273/3263971‑3263905 TCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGC < 1:15804251/68‑1 CCTCCCCTCCGCCCGTCTCCCCCGAAGAGGCCGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGC > 1:10021930/1‑67 CCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGC > 1:18814588/1‑67 CCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGC > 1:25839878/1‑67 CTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGCCTGTCTGGTCAGCTTCGGCGC > 1:11047327/1‑68 CTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGAGAGTCTGCTCTCCTTCGCCGC > 1:232336/1‑68 CTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGC < 1:1949958/68‑1 CTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGC < 1:9107938/68‑1 CTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGC < 1:25321059/68‑1 CTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGC < 1:10872873/68‑1 CTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGC < 1:27555220/68‑1 CTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGC > 1:21091980/1‑68 CTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGC > 1:8026736/1‑68 CTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGC < 1:18872649/68‑1 CTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGC > 1:4344195/1‑68 CTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGC < 1:15684835/68‑1 CTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGC < 1:12178565/68‑1 CTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGC > 1:1228346/1‑68 CTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGC > 1:13848507/1‑68 CTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGC > 1:14548/1‑68 CTCCCCTCCGCCCGTCTCACCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGC > 1:20623147/1‑68 CTCCCCTCCGCCCGGCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGC < 1:404235/68‑1 CCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGC < 1:19544005/68‑1 CCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGC < 1:26754011/68‑1 CCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGC > 1:5815203/1‑68 CCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGC < 1:24640932/68‑1 CCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTACGGCGCGC > 1:18424800/1‑68 CCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCA < 1:18321242/68‑1 CCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCA < 1:20902750/68‑1 CCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCA < 1:5142904/68‑1 CCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCA < 1:2167265/68‑1 CCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCA < 1:22457741/68‑1 CCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCA > 1:7797596/1‑68 CCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAAACCCTCT > 1:29761214/1‑68 CCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAAACCCTCT > 1:27458478/1‑68 CCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAAACCCTCTATACTG < 1:14722091/68‑1 GAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAAACCCTCTATACTGCGCGC < 1:3035023/68‑1 ACTGTCTGGTCAGCTTCGGCGCGCAAACCCGCTATACTGCGCGCCGAAGCTGCCCAGACGGTCGCCGC > 1:25600488/1‑68 TCAGCTTCGGCGCGCAAACCCTCTATACTGCGCGCCGCAGCTGACCAGACAGTCGCCGCTTCGTCGTC > 1:29668174/1‑68 CAGCTTCGGCGCGCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCGTCGTCGTCG > 1:20322763/1‑68 CAGCTTCGGCGCGCAAACCCGCTATACTGCGCGCCGAAGCTGCCCAGACAGTCGCCGCTTCGTCGTCG > 1:27208749/1‑68 GCTTCGGCGCGCAAACCCTCTATACTGCGCGCCGAAGCTGCCCAGACAGTCGCCGCTTCGTCGTCGT > 1:24782854/1‑67 GGCGCGCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCT > 1:7817502/1‑67 GCGCGCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGGCGCTTCGTCGTCGTCCTCT < 1:8991264/66‑1 GCGCGCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTC > 1:6801662/1‑68 GCGCGCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTC > 1:6835879/1‑68 GCGCGCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCT < 1:26331357/66‑1 GCGCGCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCT < 1:5700831/66‑1 GCGCGCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCT < 1:14440090/66‑1 GCGCGCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCT < 1:15811312/66‑1 GCGCGCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCT < 1:12495480/66‑1 GCGCGCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCT < 1:27866450/66‑1 GCGCGCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCT < 1:21266983/66‑1 GCGCGCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCT < 1:25817553/66‑1 GCGCGCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCT < 1:25328888/66‑1 GCGCGAAAACCCTCTATACTGCGCGCCGAAGGTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCT < 1:19814950/66‑1 GCGCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTCGG > 1:8953263/1‑68 GCGCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTCGG < 1:28996394/68‑1 GCGCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTCG < 1:29083941/67‑1 GCGCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTCG < 1:23976804/67‑1 GCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTCGGG < 1:837401/67‑1 GCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTCGGG < 1:7818688/67‑1 GCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTCGGG < 1:10283666/67‑1 GCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTCGGG < 1:27999707/67‑1 GCAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCGTCGGGG > 1:5451981/1‑68 CAAACCCTCTATACTGCGCGCCGAAGCTGACCAGCCAGTCGCCGCTTCGTCGTCGTCCTCTTCGGGGG > 1:29201293/1‑68 CAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTCGGGGG > 1:18417120/1‑68 CAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTCGGGGG > 1:11399455/1‑68 CAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTCGGGGG > 1:29611660/1‑68 CAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTCGGGGG > 1:24610169/1‑68 CAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCGTCGTCGTCGGCCTCGTCGGGGG > 1:17729672/1‑68 AAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTCGGGGGA > 1:1709196/1‑68 AAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTCGGGGG < 1:13654047/67‑1 AAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTCGGGGG < 1:4994872/67‑1 AAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTCGGGGG < 1:4003339/67‑1 TCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3263887‑3263959‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgcaAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCTTCGGGGGA < CP009273/3263971‑3263905 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |