| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4363150 | NA (NA) | 6 (0.020) | 4/96 | NT | NA | intergenic (+171/+32) | yjeI/yjeJ | DUF4156 family lipoprotein/uncharacterized protein |
| ? | CP009273 | = 4363154 | NA (NA) | intergenic (+175/+28) | yjeI/yjeJ | DUF4156 family lipoprotein/uncharacterized protein | |||||
TTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4363077‑4363150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggctggaGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA < CP009273/4363154‑4363089 TTGTAGGGCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG < 1:3975141/68‑1TTGTAGGCCGTATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG < 1:19256501/68‑1TTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAAGGATCACGTTATCAGTCATTTCAG < 1:12925892/68‑1TTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG < 1:18911167/68‑1TTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG < 1:2563801/68‑1TTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG < 1:2544209/68‑1TTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG < 1:12892685/68‑1 TGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGG < 1:24244241/68‑1 GTAGGCCGGATAAGGCGTTTAGGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG > 1:21340236/1‑66 GTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG > 1:13682981/1‑66 TAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG > 1:353518/1‑65 TAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAG > 1:12702424/1‑65 AGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTG > 1:21264043/1‑68 AGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCT < 1:28130058/67‑1 AGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCT < 1:11241892/67‑1 AGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCT < 1:10062824/67‑1 AGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCAATTCAGGCT < 1:4222339/67‑1 GGCCGGATTAGGCGTTTACGCCGCATCCGGCATGACCAACGATAAGGTTATCAGTCATTTCAGGCTGG < 1:28627150/68‑1 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTTGA > 1:29310304/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:11795574/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:250869/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:14064389/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:11572437/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:1146713/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:15639694/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:6816580/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:4677114/1‑68 GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:16830204/1‑68 CCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA < 1:3315900/67‑1 CCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA < 1:27457672/67‑1 CCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA < 1:10845597/67‑1 CCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGG < 1:16822643/66‑1 CCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGG < 1:27712312/66‑1 CCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGG < 1:10629447/66‑1 CCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGG < 1:19997961/66‑1 CCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGG < 1:26414447/66‑1 CCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGG < 1:25830984/66‑1 CCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGG < 1:10885628/66‑1 CCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGG < 1:12280711/66‑1 CCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGG < 1:24419676/66‑1 ATCACGTTATCAGTCATTTCAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTC > 1:1750391/1‑68 ATCACGTTATCAGTCATTTCAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTC > 1:21055358/1‑68 CGTTATCAGTCATTTCAGGCTGGAGCCATCCAGCCTGAAATGACTGATACCGTGATCGTTGGTCATG > 1:14515497/1‑67 TCAGTCATTTCAGGCTGGAGCCATCCTCCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGAT > 1:9099751/1‑68 AGTCATTTCAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGC > 1:23368353/1‑68 AGTCATTTCAGGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGC > 1:2292354/1‑68 GGCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAAC > 1:5914032/1‑67 GCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:17989163/1‑67 GCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:13371702/1‑67 GCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:22497547/1‑67 GCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:22343610/1‑67 GCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:22198969/1‑67 GCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:16756958/1‑67 GCTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:7868799/1‑67 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGC < 1:9028334/67‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGC < 1:27998713/67‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:9679191/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:461329/1‑66 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:7419844/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:783450/1‑66 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:9643196/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:28990767/1‑66 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:904476/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:3834443/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:16591862/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:27029968/1‑66 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:26824484/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:26441166/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:19717751/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:25049225/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:1162467/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG < 1:24833892/66‑1 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:23135208/1‑66 CTGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACG > 1:27561925/1‑66 TGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCT < 1:24938931/68‑1 TGGAGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCC < 1:21431483/67‑1 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA > 1:13211897/1‑67 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA > 1:16241709/1‑67 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA > 1:1487146/1‑67 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA < 1:815748/67‑1 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA > 1:14733416/1‑67 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA < 1:4131036/67‑1 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA < 1:11377808/67‑1 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA > 1:10658664/1‑67 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA > 1:1634208/1‑67 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA > 1:19849831/1‑67 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA > 1:2271665/1‑67 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA > 1:3805534/1‑67 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA > 1:2350751/1‑67 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA > 1:3308544/1‑67 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA > 1:25990490/1‑67 AGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA > 1:27604690/1‑67 AGCCATCCAGCCTGAAATGACTGATAACGTGAACGATGGTCATGCCGGAAGCGGCGTAAACGCCTTA > 1:2072448/1‑67 TTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4363077‑4363150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggctggaGCCATCCAGCCTGAAATGACTGATAACGTGATCGTTGGTCATGCCGGATGCGGCGTAAACGCCTTA < CP009273/4363154‑4363089 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |