| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4363150 | NA (NA) | 6 (0.020) | 4/96 | NT | NA | intergenic (+171/+32) | yjeI/yjeJ | DUF4156 family lipoprotein/uncharacterized protein |
| ? | CP009273 | = 4363154 | NA (NA) | intergenic (+175/+28) | yjeI/yjeJ | DUF4156 family lipoprotein/uncharacterized protein | |||||
Only 100 of 444 total aligned reads displayed.
ATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCTGGTGGATTGAAC > CP009273/4363088‑4363220 | aTAAGTCGGTTACTCCGCATCGGGCATGACCAACGATCAAGTTATCACTCATTTAAGGCTGGATGGc < 1:24116037/67‑1 (MQ=255)aTAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGc < 1:26854861/67‑1 (MQ=255)aTAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGc < 1:4611829/67‑1 (MQ=255)aTAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGc < 1:17242103/67‑1 (MQ=255)aTAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGc < 1:23759149/67‑1 (MQ=255) tAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCt > 1:3308544‑M2/1‑66 (MQ=255) tAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCt < 1:815748‑M2/67‑2 (MQ=255) tAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCt > 1:2350751‑M2/1‑66 (MQ=255) aGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtcca < 1:24938931‑M2/68‑5 (MQ=255) gCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccag < 1:9028334‑M2/67‑6 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccagc > 1:22198969‑M2/1‑61 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccagc > 1:22497547‑M2/1‑61 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccagc > 1:13371702‑M2/1‑61 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccag > 1:27561925‑M2/1‑61 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccag < 1:3834443‑M2/66‑6 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccag < 1:9643196‑M2/66‑6 (MQ=255) ttACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCg < 1:29151654/68‑1 (MQ=255) ttACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCg < 1:18437223/68‑1 (MQ=255) tACGCCGCATCCGGCATGACCAACGACCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGc > 1:6124077/1‑68 (MQ=255) aCGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCa < 1:11237096/68‑1 (MQ=255) aCGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCa > 1:16023653/1‑68 (MQ=255) aCGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATAGCTCCAGCCTCGCa < 1:4190439/68‑1 (MQ=255) cgccgcATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCAt > 1:13163216/1‑68 (MQ=255) cgccgcATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCAt > 1:8415380/1‑68 (MQ=255) cgccgcATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCAt > 1:2312852/1‑68 (MQ=255) gccgcATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCAtt > 1:15722850/1‑68 (MQ=255) gccgcATCCGGCATGACCAACGATCACGGTAACAGTCATTTCAGGCTGGATTGCTCCACCCTCGCaat > 1:26511104/1‑66 (MQ=37) gcATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGc < 1:7063829/68‑1 (MQ=255) gcATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGc < 1:21481657/68‑1 (MQ=255) tCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCaaa > 1:18787462/1‑68 (MQ=255) ccGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAg < 1:19154904/68‑1 (MQ=255) ccGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAg < 1:2843869/68‑1 (MQ=255) ccGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAg < 1:7360159/68‑1 (MQ=255) ccGGCATGACCAACGATCACGTTATCAGGCATTTCAGTCTGGATGGCTCCAGCCTCGCATTAGCAAAg < 1:18991253/68‑1 (MQ=255) cGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGa < 1:28267914/68‑1 (MQ=255) cGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGa < 1:20325458/68‑1 (MQ=255) cGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGa < 1:12465510/68‑1 (MQ=255) cGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGa < 1:13870876/68‑1 (MQ=255) aTGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgag < 1:9218231/68‑1 (MQ=255) aTGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgag < 1:1415566/68‑1 (MQ=255) aTGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgag < 1:2992225/68‑1 (MQ=255) aTGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgag > 1:14853051/1‑68 (MQ=255) aTGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgag < 1:22801149/68‑1 (MQ=255) tGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgaga < 1:20696044/68‑1 (MQ=255) tGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgaga > 1:7883464/1‑68 (MQ=255) gACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGat < 1:10667689/68‑1 (MQ=255) ccAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTGCAGCCTCGCATTAGCAAAGATGAGatta > 1:13067818/1‑68 (MQ=255) ccAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGatta > 1:9844312/1‑68 (MQ=255) ccAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGatta > 1:11891869/1‑68 (MQ=255) aaCGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGattatt < 1:80274/68‑1 (MQ=255) aCGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCg < 1:2058820/45‑1 (MQ=255) gATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTc > 1:17508605/1‑67 (MQ=255) gATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTc > 1:5121052/1‑67 (MQ=255) gATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTc > 1:27707020/1‑67 (MQ=255) gATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATCAGATTATTTc > 1:24623308/1‑67 (MQ=255) aTCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCg > 1:4436183/1‑67 (MQ=255) aTCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCg > 1:25267700/1‑67 (MQ=255) cGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCtgt > 1:20150249/1‑68 (MQ=255) cGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCtgt > 1:11495269/1‑68 (MQ=255) cGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCtgt < 1:19433915/68‑1 (MQ=255) cGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCtgt > 1:19551222/1‑68 (MQ=255) gTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTTGCAAAGATGAGATTATTTCGCCtgtg > 1:5687892/1‑68 (MQ=255) ttATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTgtgg > 1:1056288/1‑68 (MQ=255) tATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTgtggt < 1:16629779/68‑1 (MQ=255) tATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTgtgg < 1:29437854/67‑1 (MQ=255) tCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGc > 1:16349412/1‑68 (MQ=255) cAGTCATTTCCGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCa > 1:23275114/1‑68 (MQ=255) cAGTCATTTCAGGCTGGATGGCTCCAGCCTCTCTTTAGCAAAGATGAGATTATTTCGCCTGTGGTGCa < 1:6615286/68‑1 (MQ=255) aGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTgtggt > 1:10947598/1‑64 (MQ=255) aGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAg > 1:10157872/1‑68 (MQ=255) aGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAg > 1:14943679/1‑68 (MQ=255) aGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAg > 1:15939939/1‑68 (MQ=255) aGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAg > 1:21730683/1‑68 (MQ=255) aGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAg > 1:6247237/1‑68 (MQ=255) aGTCATTTCACGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAg > 1:21966283/1‑68 (MQ=255) tCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGtt > 1:26343956/1‑68 (MQ=255) cATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGt < 1:8684766/66‑1 (MQ=255) cATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGt < 1:12729018/66‑1 (MQ=255) aTTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGtttt > 1:21137917/1‑68 (MQ=255) tCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCt < 1:27991324/68‑1 (MQ=255) tCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCt < 1:3473843/68‑1 (MQ=255) tCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCt < 1:21299152/68‑1 (MQ=255) tCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCt < 1:18157622/68‑1 (MQ=255) tCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCt < 1:20820914/68‑1 (MQ=255) cAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtg > 1:28768801/1‑68 (MQ=255) cAGGCTGGATGGCTCCAGCCTCGCATTAGCAAACATGATATTATTACGCATGTGGAGCAGTTTTGCtg > 1:25874093/1‑68 (MQ=255) ggCTGGATGGCTCCAGCCTCGCAGTAGCAAAGATGATATTATTTCGCCTGTGGTGCAGTTTTGCtggg > 1:15541798/1‑67 (MQ=255) gCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggtg > 1:7581371/1‑68 (MQ=255) cTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggtgg > 1:11631697/1‑68 (MQ=255) cTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggtgg > 1:24998260/1‑68 (MQ=255) cTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggtgg > 1:14730624/1‑68 (MQ=255) cTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggtgg > 1:7801149/1‑68 (MQ=255) cTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggtg < 1:2716028/67‑1 (MQ=255) cTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtgg < 1:25573374/65‑1 (MQ=255) cTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATATCGCCTGTGGTGCAGTTTTGCtgg < 1:16896145/65‑1 (MQ=255) tGGCTCCAGCCTCGCATTAGCAAATATGAGATTATTTCGCCTGTGGTGCAGTTTTGCTGGTGGATTGa < 1:19974967/68‑1 (MQ=255) tGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCTGGTGGATTGa < 1:12949457/68‑1 (MQ=255) tGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCTGGTGGATTGa < 1:6965069/68‑1 (MQ=255) tGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCTGGTGGATTGa < 1:6752839/68‑1 (MQ=255) tGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCTGGTGGATTGa < 1:4009435/68‑1 (MQ=255) | ATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCTGGTGGATTGAAC > CP009273/4363088‑4363220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |