| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4363150 | NA (NA) | 6 (0.020) | 4/96 | NT | NA | intergenic (+171/+32) | yjeI/yjeJ | DUF4156 family lipoprotein/uncharacterized protein |
| ? | CP009273 | = 4363154 | NA (NA) | intergenic (+175/+28) | yjeI/yjeJ | DUF4156 family lipoprotein/uncharacterized protein | |||||
Only 100 of 485 total aligned reads displayed.
GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCTGGTGGATTG > CP009273/4363083‑4363217 | gCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA > 1:1146713‑M1/1‑68 (MQ=255) ccGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGA < 1:3315900‑M1/67‑1 (MQ=255) aTAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGc < 1:20167223/67‑1 (MQ=255) tAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCt > 1:1634208‑M2/1‑66 (MQ=255) tAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCt > 1:27604690‑M2/1‑66 (MQ=255) tAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCt > 1:2271665‑M2/1‑66 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccagc > 1:22198969‑M2/1‑61 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccagc > 1:16756958‑M2/1‑61 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccag < 1:7419844‑M2/66‑6 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccag < 1:16591862‑M2/66‑6 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccag < 1:25049225‑M2/66‑6 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccag < 1:904476‑M2/66‑6 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccag > 1:461329‑M2/1‑61 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccag < 1:9643196‑M2/66‑6 (MQ=255) cGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccag > 1:27029968‑M2/1‑61 (MQ=255) ttACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCg < 1:8839457/68‑1 (MQ=255) ttACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCg < 1:6795806/68‑1 (MQ=255) tACGCCGCATCCGGCATGACCAACGACCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGc > 1:6124077/1‑68 (MQ=255) aCGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCa > 1:7289834/1‑68 (MQ=255) aCGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCa < 1:2200923/68‑1 (MQ=255) aCGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCa < 1:11237096/68‑1 (MQ=255) aCGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCa < 1:11614334/68‑1 (MQ=255) cgccgcATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCAt > 1:13163216/1‑68 (MQ=255) cgccgcATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCAt > 1:27863913/1‑68 (MQ=255) gccgcATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCAtt > 1:349872/1‑68 (MQ=255) gccgcATCCGGCATGACCAACGATCACGGTAACAGTCATTTCAGGCTGGATTGCTCCACCCTCGCaat > 1:26511104/1‑66 (MQ=37) cgcATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTa < 1:14144271/67‑1 (MQ=255) cgcATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAg < 1:771806/68‑1 (MQ=255) gcATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCtccagcctgaaatgact > 1:23368353‑M2/1‑51 (MQ=255) gcATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGc < 1:21481657/68‑1 (MQ=255) gcATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGc < 1:22961244/68‑1 (MQ=255) tCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCaaa > 1:2684131/1‑68 (MQ=255) cGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGa < 1:19234662/68‑1 (MQ=255) cGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGa < 1:2414403/68‑1 (MQ=255) cGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGa < 1:24955514/68‑1 (MQ=255) gCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGTCTCCAGCCTCGCAATACCAAAGATg > 1:23536535/1‑68 (MQ=255) cATGACCAACGATCACGGTATCAGTCATTTCAGGCTGGATGGCtccagcctgaaatgactgataacg > 1:14515497‑M2/1‑43 (MQ=255) aTGACCAACTATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgag < 1:5125131/68‑1 (MQ=255) aTGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgag < 1:4538308/68‑1 (MQ=255) aTGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgag > 1:12489698/1‑68 (MQ=255) aTGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgag < 1:13805710/68‑1 (MQ=255) aTGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgag > 1:14853051/1‑68 (MQ=255) gACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGat < 1:10667689/68‑1 (MQ=255) ccACCGATCACGTTATCATTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGctta > 1:29660542/1‑68 (MQ=255) ccAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTGCAGCCTCGCATTAGCAAAGATGAGatta > 1:13067818/1‑68 (MQ=255) ccAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGatta > 1:9844312/1‑68 (MQ=255) ccAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGatta > 1:7946203/1‑68 (MQ=255) ccAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGatta > 1:11891869/1‑68 (MQ=255) aaCGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGattatt < 1:626530/68‑1 (MQ=255) gATCACTTTATCAGTCATTGCAGGCTGGATGGCTCAAGCCTCGCATTAGCAAAGATGAGATTATTTCg < 1:2569348/68‑1 (MQ=255) aTCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCg > 1:25267700/1‑67 (MQ=255) aTCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCg > 1:28352066/1‑67 (MQ=255) tCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGcc < 1:11661917/68‑1 (MQ=255) gTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCtgtg < 1:17033690/68‑1 (MQ=255) ttATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTgtgg > 1:1056288/1‑68 (MQ=255) tATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTgtggt < 1:24748161/68‑1 (MQ=255) tATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTgtggt > 1:29299461/1‑68 (MQ=255) tATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTgtggt < 1:28489701/68‑1 (MQ=255) aTCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTgtggt > 1:2053263/1‑67 (MQ=255) tCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGc > 1:18875203/1‑68 (MQ=255) aGTCATTTCAGTCTGGATGGCTAAAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGGGCAg > 1:3169564/1‑68 (MQ=255) aGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAg > 1:856413/1‑68 (MQ=255) aGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAg > 1:18616454/1‑68 (MQ=255) aGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAg > 1:14943679/1‑68 (MQ=255) aGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAg > 1:27434426/1‑68 (MQ=255) aGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAg > 1:21730683/1‑68 (MQ=255) aGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAg > 1:10157872/1‑68 (MQ=255) aGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAg > 1:15939939/1‑68 (MQ=255) gTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGt > 1:12822915/1‑68 (MQ=255) tCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGtt > 1:26343956/1‑68 (MQ=255) tCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGtt > 1:1091369/1‑68 (MQ=255) tCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGtt > 1:15733229/1‑68 (MQ=255) cATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAg < 1:7862046/65‑1 (MQ=255) cATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGtt < 1:16140250/67‑1 (MQ=255) cATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGtt < 1:21127497/67‑1 (MQ=255) cATATCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGt < 1:19067686/66‑1 (MQ=255) tCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCt < 1:6993348/68‑1 (MQ=255) tCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCt < 1:23817041/68‑1 (MQ=255) tCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCt < 1:21299152/68‑1 (MQ=255) tCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCt < 1:20820914/68‑1 (MQ=255) ggCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggt > 1:17578124/1‑68 (MQ=255) ggCTGGATGGCTCCAGCCTCGCAGTAGCAAAGATGATATTATTTCGCCTGTGGTGCAGTTTTGCtggg > 1:15541798/1‑67 (MQ=255) gCTGGAgccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacg > 1:22497547‑M1/1‑6 (MQ=255) gCTGGAgccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacg > 1:13371702‑M1/1‑6 (MQ=255) gCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggtg > 1:9346077/1‑68 (MQ=255) cTGGAgccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacgc < 1:27998713‑M1/67‑63 (MQ=255) cTGGAgccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacg < 1:3834443‑M1/66‑62 (MQ=255) cTGGAgccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacg < 1:19717751‑M1/66‑62 (MQ=255) cTGGAgccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacg > 1:28990767‑M1/1‑5 (MQ=255) cTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggtgg > 1:4320377/1‑68 (MQ=255) cTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggtgg > 1:20683439/1‑68 (MQ=255) cTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggtgg > 1:20004919/1‑68 (MQ=255) cTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggtgg > 1:17365117/1‑68 (MQ=255) cTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggtgg > 1:18176535/1‑68 (MQ=255) cTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtggtgg > 1:19535581/1‑68 (MQ=255) cTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtgg < 1:5851308/65‑1 (MQ=255) cTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCtgg < 1:23217559/65‑1 (MQ=255) agccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacgcctta < 1:815748‑M1/67‑67 (MQ=255) agccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacgcctta > 1:25990490‑M1/1‑1 (MQ=255) agccatccagcctgaaatgactgataacgtgatcgttggtcatgccggatgcggcgtaaacgcctta < 1:4131036‑M1/67‑67 (MQ=255) | GCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGATTATTTCGCCTGTGGTGCAGTTTTGCTGGTGGATTG > CP009273/4363083‑4363217 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |