New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 108768 =268 (0.740)14 (0.040) 5/100 NT 5.7% coding (319/744 nt) zapD FtsZ stabilizer
?CP009273 108799 = 226 (0.700)coding (288/744 nt) zapD FtsZ stabilizer

Only 100 of 368 total aligned reads displayed.

CTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGG  >  CP009273/108702‑108835
                                                                  |                                                                   
cagacctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagc                                                                    >  1:6085152‑M1/67‑68 (MQ=255)
cagacctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagc                                                                    >  1:11658635‑M1/67‑68 (MQ=255)
   acctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggc                                                                 <  1:26108499‑M1/5‑1 (MQ=255)
    gATGCTCAGTCGCTGCCGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggc                                                                 >  1:18928188/1‑67 (MQ=255)
    gATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggc                                                                 <  1:27148513/67‑1 (MQ=255)
    gATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggc                                                                 >  1:26369319/1‑67 (MQ=255)
    cctggattggcgtgcctggcgtggcccagagccgtattgaagcattaattcagcagttaaaagcggcg                                                                <  1:14211022‑M1/6‑1 (MQ=255)
    cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggcg                                                                <  1:27515147‑M1/6‑1 (MQ=255)
    cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggcg                                                                <  1:15472757‑M1/6‑1 (MQ=255)
    cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggcg                                                                <  1:16829223‑M1/6‑1 (MQ=255)
    cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggcg                                                                <  1:19253356‑M1/6‑1 (MQ=255)
    cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggcg                                                                <  1:23796893‑M1/6‑1 (MQ=255)
    cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggc                                                                 >  1:6847424‑M1/63‑67 (MQ=255)
    cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcgg                                                                  >  1:12213418‑M1/63‑66 (MQ=255)
    ccgggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggc                                                                 >  1:9109000‑M1/63‑67 (MQ=255)
      tGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggcgcg                                                              >  1:29438184/1‑68 (MQ=255)
       gCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggcgcgg                                                             <  1:7552343/68‑1 (MQ=255)
         tCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGa                                                            <  1:14517482/67‑1 (MQ=255)
         tCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGa                                                            <  1:5234180/67‑1 (MQ=255)
         tCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTACCCGATACGCGGCGCGGa                                                            <  1:24056112/67‑1 (MQ=255)
          cAGTCGCTGACGCACCAGTTCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:21548034/68‑1 (MQ=255)
          cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:14039946/68‑1 (MQ=255)
          cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:4316118/68‑1 (MQ=255)
          cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:24342073/68‑1 (MQ=255)
          cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:4676837/68‑1 (MQ=255)
          cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:21802906/68‑1 (MQ=255)
          cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:20816244/68‑1 (MQ=255)
           aGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAAt                                                         >  1:10713913/1‑68 (MQ=255)
            gTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAAtt                                                        >  1:25081507/1‑68 (MQ=255)
              cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAAtt                                                        <  1:29698100/66‑1 (MQ=255)
              cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAAtt                                                        <  1:21258339/66‑1 (MQ=255)
              cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTaa                                                      >  1:8011360/1‑68 (MQ=255)
              cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTaa                                                      >  1:7737049/1‑68 (MQ=255)
              cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTaa                                                      <  1:10051812/68‑1 (MQ=255)
              cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTaa                                                      >  1:1584943/1‑68 (MQ=255)
                   aCGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATAc                                                   >  1:12493197/1‑66 (MQ=255)
                   aCGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATAc                                                   >  1:7417857/1‑66 (MQ=255)
                   aCGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATAc                                                   >  1:8935591/1‑66 (MQ=255)
                    cGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCt                                                <  1:11986311/68‑1 (MQ=255)
                       aCCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTcc                                              <  1:14324700/67‑1 (MQ=255)
                          agagCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccg                                           >  1:28084681/1‑67 (MQ=255)
                          agagCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccg                                           >  1:22019700/1‑67 (MQ=255)
                            agCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         >  1:8234983/1‑67 (MQ=255)
                            agCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         >  1:27607626/1‑67 (MQ=255)
                             gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         <  1:661296/66‑1 (MQ=255)
                             gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         >  1:15171186/1‑66 (MQ=255)
                             gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         >  1:26971153/1‑66 (MQ=255)
                             gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         >  1:28649466/1‑66 (MQ=255)
                             gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         >  1:17400355/1‑66 (MQ=255)
                             gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         >  1:2006365/1‑66 (MQ=255)
                             gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         >  1:13724481/1‑66 (MQ=255)
                             gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCcagccga                                       >  1:4852125/1‑67 (MQ=255)
                               aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:25648464/66‑1 (MQ=255)
                               aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:2333678/66‑1 (MQ=255)
                                aTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCttt                                    <  1:19637853/68‑1 (MQ=255)
                                  gccgtattgaagcattaattcagcagttaaaaGCGGCGCGGAAATTAATAAGCTCCCCGCCGCTTTTa                                  <  1:6541396‑M1/36‑1 (MQ=255)
                                  cAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                  >  1:5436431/1‑68 (MQ=255)
                                    aaCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                  >  1:7249583/1‑66 (MQ=255)
                                     aCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               <  1:18534317/68‑1 (MQ=255)
                                     aCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               <  1:29674423/68‑1 (MQ=255)
                                     aCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               <  1:20650497/68‑1 (MQ=255)
                                       gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgc                             <  1:13218162/68‑1 (MQ=255)
                                       gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgc                             >  1:23561134/1‑68 (MQ=255)
                                       gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               >  1:9159128/1‑66 (MQ=255)
                                         tCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgct                            <  1:15003304/67‑1 (MQ=255)
                                          cTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGa                          <  1:24527761/68‑1 (MQ=255)
                                           ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                         <  1:28963475/68‑1 (MQ=255)
                                           ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                         <  1:3834815/68‑1 (MQ=255)
                                            agcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCGGTTTACTGCTGAAt                        <  1:21151992‑M1/46‑1 (MQ=255)
                                              aCGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTa                      >  1:19745740/1‑68 (MQ=255)
                                               cGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTaa                     >  1:8714398/1‑68 (MQ=255)
                                                  aGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATg                   <  1:26553145/67‑1 (MQ=255)
                                                    ttcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:10978733‑M1/53‑1 (MQ=255)
                                                     aactGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:20415258/63‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:7914437/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:449653/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:2829504/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:3954323/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:3345688/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:29140957/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:16428778/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:17206302/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:25457081/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:18164962/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:23063204/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:22596726/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:22191171/66‑1 (MQ=255)
                                                        tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt            <  1:2476038/68‑1 (MQ=255)
                                                          cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc          >  1:6385656/1‑68 (MQ=255)
                                                          cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc          >  1:2423028/1‑68 (MQ=255)
                                                          cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc          >  1:19406717/1‑68 (MQ=255)
                                                             gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:9861916/68‑1 (MQ=255)
                                                             gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:564526/68‑1 (MQ=255)
                                                             gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:4174283/68‑1 (MQ=255)
                                                                aCGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGctct    <  1:3576313/68‑1 (MQ=255)
                                                                  GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTACTGCTTCAATACGGCTCTgg  <  1:29297635‑M1/68‑1 (MQ=255)
                                                                  GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg  <  1:29819344‑M1/68‑1 (MQ=255)
                                                                  GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg  >  1:21789392‑M1/1‑68 (MQ=255)
                                                                  GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg  >  1:11308666‑M1/1‑68 (MQ=255)
                                                                  GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg  <  1:10401278‑M1/68‑1 (MQ=255)
                                                                  |                                                                   
CTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGG  >  CP009273/108702‑108835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.