| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3832491 = | 307 (0.850) | 13 (0.040) | 5/96 | NT | 6.4% | coding (884/924 nt) | yicL | EamA family inner membrane putative transporter |
| ? | CP009273 | 3832524 = | 119 (0.390) | coding (917/924 nt) | yicL | EamA family inner membrane putative transporter | |||||
Only 100 of 404 total aligned reads displayed.
ACCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACC > CP009273/3832426‑3832558 | aCCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTcgcc > 1:1883599/1‑68 (MQ=255) tcgctaaagcggcagaaaccatttttaacggtggcgcggtgcctggctggtaattctcacttatGcc < 1:27263727‑M1/3‑1 (MQ=255) ccGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTcgcc > 1:8621170/1‑67 (MQ=255) ccGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTcgcc > 1:11401907/1‑67 (MQ=255) ccGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTcgcc > 1:29496216/1‑67 (MQ=255) cgctacagcggcagaaaccatttttaacggtggcgcggtgcctggctggtaattctcacttatGCcgc > 1:24674‑M1/64‑68 (MQ=255) cgctaaagcggcagaaaccatttttaacggtggcgcggtgcctggctggtaattctcacttatGcc > 1:18255977‑M1/64‑66 (MQ=255) cgctaaagcggcagaaaccatttttaacggtggcgcggtgcctggctggtaattctcacttatGCcgc > 1:6163296‑M1/64‑68 (MQ=255) cgctaaagcggcagaaaccatttttaacggtggcgcggtgcctggctggtaattctcacttatGCcgc < 1:22373137‑M1/5‑1 (MQ=255) ggACTGGCTGGGACCGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTcgccgc > 1:5639997/1‑67 (MQ=255) gctaaagcggcagaaaccatttttaacggtggcgcggtgcctggctggtaattctcacttatGCcgcg > 1:28954938‑M1/63‑68 (MQ=255) ctaaagcggcagaaaccatttttaacggtggcgcggtgcctggctggtaattctcacttatGCcgcg < 1:918548‑M1/6‑1 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:12691943/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:29217143/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:13099234/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:19735302/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:22560386/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:20776613/1‑68 (MQ=255) aCTGGCTGGGAAAGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:2369737/1‑68 (MQ=255) tggGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGataa > 1:15651226/1‑68 (MQ=255) tggGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGaaaa > 1:24269147/1‑68 (MQ=255) tggGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGaaaa > 1:9747039/1‑68 (MQ=255) tggGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGaaa < 1:18566517/67‑1 (MQ=255) tggGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGaaa < 1:23515274/67‑1 (MQ=255) tggGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGaaa < 1:16297973/67‑1 (MQ=255) gggAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGaaaaa < 1:28785735/68‑1 (MQ=255) gggAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGaaaaa < 1:5208907/68‑1 (MQ=255) aaCGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAaaataa > 1:6887819/1‑68 (MQ=255) aaCGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAaaataa > 1:4001265/1‑68 (MQ=255) aaCGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAaaataa > 1:4588504/1‑68 (MQ=255) aaCGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAaaataa > 1:13346222/1‑68 (MQ=255) aaCGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAaaataa > 1:28097821/1‑68 (MQ=255) aaCGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAaaataa > 1:16127450/1‑68 (MQ=255) aaCGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAaaataa > 1:25817602/1‑68 (MQ=255) aaCGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAaaataa > 1:8452562/1‑68 (MQ=255) aCGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAaaataaa > 1:27072312/1‑68 (MQ=255) cGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAaaataaat < 1:8749856/68‑1 (MQ=255) tgctgATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGt < 1:12876931/68‑1 (MQ=255) ttCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGgc > 1:950337/1‑67 (MQ=255) ttCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGgc > 1:21835628/1‑67 (MQ=255) ttCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGgc < 1:12475058/67‑1 (MQ=255) ttCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGgc > 1:28010842/1‑67 (MQ=255) cTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGcgcg > 1:4719286/1‑68 (MQ=255) cTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGcgcg < 1:24971835/68‑1 (MQ=255) cTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATAGTCCGGcgcg > 1:26468339/1‑68 (MQ=255) cTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAAACGTCCGGcgcg > 1:21591892/1‑68 (MQ=255) gTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGc < 1:14736870/68‑1 (MQ=255) gTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGc < 1:22838530/68‑1 (MQ=255) gTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGc < 1:2979618/68‑1 (MQ=255) gTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGc < 1:15113995/68‑1 (MQ=255) gTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGc < 1:1453193/68‑1 (MQ=255) gTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGc < 1:20271962/68‑1 (MQ=255) gTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGc < 1:12077944/68‑1 (MQ=255) cATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGcg < 1:15875819/67‑2 (MQ=255) aTCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATa < 1:7408542/68‑1 (MQ=255) tCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATaa < 1:19193653/68‑1 (MQ=255) cGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAg < 1:3043064/68‑1 (MQ=255) cGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAg < 1:21339433/68‑1 (MQ=255) cGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAg < 1:17885188/68‑1 (MQ=255) gTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTg > 1:2622473/1‑68 (MQ=255) tgattttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTga > 1:17330831/1‑68 (MQ=255) gattttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTgag < 1:18489222/68‑1 (MQ=255) gattttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTgag < 1:22897030/68‑1 (MQ=255) attttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTgag < 1:16770301/67‑1 (MQ=255) ttttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTgaga < 1:14255656/67‑1 (MQ=255) tttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAt < 1:7061813/68‑1 (MQ=255) tttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAt < 1:23179311/68‑1 (MQ=255) ttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAtt < 1:27702957/68‑1 (MQ=255) tgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAtt > 1:10860190/1‑67 (MQ=255) gctggtaattctcacttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAcc < 1:26068057‑M1/49‑1 (MQ=255) gctggtaattctcacttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAcc < 1:20472955‑M1/49‑1 (MQ=255) gctggtaattctcacttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAcc < 1:28525864‑M1/49‑1 (MQ=255) atttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAcc > 1:17686899/1‑68 (MQ=255) atttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAcc > 1:6300165/1‑68 (MQ=255) ttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccag < 1:6499331/68‑1 (MQ=255) tCAATGGATTCCCGTCGCCGCGCGAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagc < 1:2390048/68‑1 (MQ=255) tCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccatc < 1:14004861/68‑3 (MQ=255) tCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagc < 1:5389887/68‑1 (MQ=255) tCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagc < 1:26891927/68‑1 (MQ=255) tCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagc < 1:755432/68‑1 (MQ=255) tCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagc < 1:10000295/68‑1 (MQ=255) tCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagc < 1:487118/68‑1 (MQ=255) tCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagc < 1:337631/68‑1 (MQ=255) aTGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGATTTAccagccag > 1:25195995/1‑68 (MQ=255) tGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagccagt < 1:20095838/68‑2 (MQ=255) ggATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGc > 1:1993443/1‑68 (MQ=255) ggATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGc > 1:18928902/1‑68 (MQ=255) ctcacttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCa < 1:21028236‑M1/58‑1 (MQ=255) aTTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGTCATAAGTGAGAATTACCCGCCAGGCa > 1:12239662/1‑67 (MQ=255) ttCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCAcc < 1:3751992/68‑1 (MQ=255) cccGTCGCCGCGCCAGAAAAATAAATAGTCCGGCGCGGCATAAGTGAGAATTACCCGCCAGGCACcgc > 1:16431973/1‑68 (MQ=255) cttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACcgc < 1:15331515‑M1/62‑1 (MQ=255) cGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACcgcg > 1:4269694/1‑67 (MQ=255) cGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACcgcg > 1:1387388/1‑67 (MQ=255) tCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGcc > 1:27585865/1‑67 (MQ=255) cgccgcGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAc < 1:10424938/68‑1 (MQ=255) GCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAcc < 1:10285029‑M1/68‑1 (MQ=255) GCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAcc < 1:5859036‑M1/68‑1 (MQ=255) GCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAcc < 1:7947202‑M1/68‑1 (MQ=255) GCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAcc < 1:23331547‑M1/68‑1 (MQ=255) | ACCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACC > CP009273/3832426‑3832558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |