| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2707629 = | NA (NA) | 6 (0.020) +TTC |
4/106 | NT | NA | intergenic (+40/+169) | srmB/yfiE | ATP‑dependent RNA helicase/putative DNA‑binding transcriptional regulator |
| ? | CP009273 | = 3323920 | NA (NA) | intergenic (+165/+21) | dacB/obgE | D‑alanyl‑D‑alanine carboxypeptidase/GTPase involved in cell partioning and DNA repair | |||||
Only 100 of 427 total aligned reads displayed.
AAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCGTCCC > CP009273/3323853‑3323987 | aTCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTg > 1:16743877/1‑68 (MQ=255) aTCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTg > 1:22138570/1‑68 (MQ=255) aTCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTg > 1:4325447/1‑68 (MQ=255) aTCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTg > 1:7695584/1‑68 (MQ=255) aTCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTg > 1:5661618/1‑68 (MQ=255) aTCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTg > 1:2561596/1‑68 (MQ=255) aTCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTg > 1:25782680/1‑68 (MQ=255) aTCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTg > 1:2946026/1‑68 (MQ=255) aTCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTg > 1:10492200/1‑68 (MQ=255) cGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGc < 1:25424013/68‑1 (MQ=255) cGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGc < 1:19519677/68‑1 (MQ=255) gCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGtt < 1:13642748/68‑1 (MQ=255) aaaTTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTa < 1:24651194/68‑1 (MQ=255) aaaTTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTa < 1:19766697/68‑1 (MQ=255) aaaTTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTa < 1:19479602/68‑1 (MQ=255) aaTTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTat < 1:1803401/68‑1 (MQ=255) ttCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTatca > 1:16899308/1‑68 (MQ=255) cAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTatcatc < 1:25083015/68‑1 (MQ=255) cATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGt < 1:5963039/68‑1 (MQ=255) cATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGt > 1:17477128/1‑68 (MQ=255) cATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGt > 1:16550078/1‑68 (MQ=255) atatTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTg < 1:28653220/68‑1 (MQ=255) atatTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTg < 1:28114456/68‑1 (MQ=255) atatTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTg > 1:27655821/1‑68 (MQ=255) atatTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTg < 1:7082590/68‑1 (MQ=255) atatTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCAACAGTg > 1:20025398/1‑68 (MQ=255) atatTGCAATTCACTTGTAGGCCAGATAAGCGTAGCGCATCAGGCGGATTTGGCGTTTATCATCAGTg > 1:15189666/1‑68 (MQ=17) tatTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGa < 1:10842429/68‑1 (MQ=255) tatTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGa < 1:3927140/68‑1 (MQ=255) tatTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGa < 1:3625655/68‑1 (MQ=255) tatTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGa < 1:20947017/68‑1 (MQ=255) tatTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGa > 1:13332985/1‑68 (MQ=255) tactGCAATTCTCTTGTAGGCCTGATAAGCGCAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGa < 1:20458123/65‑1 (MQ=255) atTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGAt < 1:22368553/68‑1 (MQ=255) gCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTa > 1:25286672/1‑67 (MQ=255) gCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTa > 1:3066931/1‑67 (MQ=255) cAATTCTCTTGTAGGCCTGATAAGAGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAAc > 1:2958705/1‑68 (MQ=255) aaTTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGAGATTAAc > 1:16138805/1‑67 (MQ=255) aTTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAAc > 1:19256674/1‑66 (MQ=255) aTTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGc < 1:22988471/68‑1 (MQ=255) ttCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCt < 1:12016196/68‑1 (MQ=255) ttCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCt < 1:15958576/68‑1 (MQ=255) tctcTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCtt < 1:16322957/68‑1 (MQ=255) tctcTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCtt < 1:22235345/68‑1 (MQ=255) tctcTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCtt > 1:21904755/1‑68 (MQ=255) ctctTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTg < 1:4872643/68‑1 (MQ=255) ctTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTa < 1:17217409/68‑1 (MQ=255) ctTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTa < 1:8273575/68‑1 (MQ=255) ctTGGAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTa < 1:18600321/68‑1 (MQ=255) tGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTaaa > 1:21248225/1‑68 (MQ=255) tGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTaaa > 1:6912363/1‑68 (MQ=255) aGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGa > 1:4767170/1‑68 (MQ=255) aGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGa > 1:1241033/1‑68 (MQ=255) gCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGa > 1:8098040/1‑66 (MQ=255) gCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGa > 1:10062673/1‑66 (MQ=255) gCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGa > 1:28984516/1‑66 (MQ=255) gCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGa > 1:9599141/1‑66 (MQ=255) gCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGa > 1:18796189/1‑66 (MQ=255) gCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGa > 1:14472340/1‑66 (MQ=255) gCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGa > 1:20223375/1‑66 (MQ=255) gCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGa > 1:21325321/1‑66 (MQ=255) gCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGa > 1:14276145/1‑66 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCTGATgaacaaacgcaaaactgcctgatgcgctacgcttatcag < 1:23498405‑M2/67‑40 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAAc < 1:23265926/67‑1 (MQ=255) gATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCaa < 1:14688596/68‑1 (MQ=255) aTAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGACTAACGCTTGTAAATGAACTCAAc > 1:10210857/1‑68 (MQ=255) tAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAAc > 1:877603/1‑67 (MQ=255) aaGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACg > 1:353705/1‑67 (MQ=255) aGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACg > 1:15015631/1‑66 (MQ=255) aGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACg > 1:6979453/1‑66 (MQ=255) gTAGCGCATCAGGCTGATTTTGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCct > 1:2370757/1‑66 (MQ=255) gTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCctt < 1:13272071/67‑1 (MQ=255) gTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCct > 1:27024972/1‑66 (MQ=255) gTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCct > 1:27465691/1‑66 (MQ=255) gTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCct > 1:5204799/1‑66 (MQ=255) gTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCct > 1:3282649/1‑66 (MQ=255) gTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCct > 1:21837514/1‑66 (MQ=255) aGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCcttctt < 1:15343660/68‑1 (MQ=255) aGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCcttctt < 1:22841835/68‑1 (MQ=255) aGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCcttct < 1:5541669/67‑1 (MQ=255) gcgcATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCttcttc > 1:26276740/1‑68 (MQ=255) gcATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTtcg > 1:9732873/1‑67 (MQ=255) gcATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTtcg > 1:9321897/1‑67 (MQ=255) gcATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTtcg > 1:25986075/1‑67 (MQ=255) gcATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTtcg > 1:11358362/1‑67 (MQ=255) gcATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAAAGCCTTCTtcg > 1:18301986/1‑67 (MQ=255) tCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTtcgtcg > 1:12799284/1‑67 (MQ=255) tCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTcgtcgt < 1:7270400/68‑1 (MQ=255) tCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTcgtcgt < 1:24383074/68‑1 (MQ=255) tCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTcgtcgt < 1:19085696/68‑1 (MQ=255) cAGGCTGATTTGGCGTTAATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCgtcgtc < 1:6267880/68‑1 (MQ=255) aGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCt > 1:28189591/1‑68 (MQ=255) aGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCt > 1:11160702/1‑68 (MQ=255) cTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCg > 1:26561693/1‑68 (MQ=255) cTGATATGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCg > 1:29274510/1‑68 (MQ=255) tGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCg < 1:9472638/67‑1 (MQ=255) tGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCGt < 1:8349027/68‑1 (MQ=255) tGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCGt < 1:21598087/68‑1 (MQ=255) tttGGCGTTTATCATCAGTGATTAACGCTTGTAAATGACCTCAACGCCTTCTTCGTCGTCTTCGTcc > 1:24517013/1‑67 (MQ=255) tttGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCGTccc < 1:26791574/68‑1 (MQ=255) | AAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCGTCCC > CP009273/3323853‑3323987 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |