| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4046794 | 484 (1.030) | 26 (0.070) | 9/94 | NT | 5.5% | intergenic (+16/+213) | hemN/yshB | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent/uncharacterized protein |
| ? | CP009273 | = 4046815 | 487 (1.230) | intergenic (+37/+192) | hemN/yshB | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent/uncharacterized protein | |||||
Only 100 of 149 total aligned reads displayed.
GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4046720‑4046794‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcgcttTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCATCC < CP009273/4046815‑4046750 GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT > 1:18216499/1‑68GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT > 1:10582768/1‑68GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT > 1:5881789/1‑68GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT > 1:4304273/1‑68GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT > 1:12129306/1‑68GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT < 1:25393321/68‑1GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAAT > 1:26047607/1‑68 CTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATG > 1:36641642/1‑68 CTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATG > 1:25188543/1‑68 CTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATG > 1:29979344/1‑68 TTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGG < 1:18501473/68‑1 TTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATG > 1:10528361/1‑67 TTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC < 1:27834486/68‑1 TTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC < 1:29956624/68‑1 TTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC < 1:32005685/68‑1 TTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC < 1:358799/68‑1 TTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC < 1:9680332/68‑1 TTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC < 1:27025265/68‑1 TTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC < 1:13945072/68‑1 TTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC < 1:14100393/68‑1 GATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC > 1:1160228/1‑66 GATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGC > 1:30902661/1‑66 ATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:15065359/1‑68 ATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:15203607/1‑68 ATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:32580926/1‑68 ATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:13930173/1‑68 ATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:18635356/1‑68 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT < 1:33199735/68‑1 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT < 1:8271000/68‑1 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT < 1:8358972/68‑1 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT < 1:19077198/68‑1 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT < 1:17661328/68‑1 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:11925324/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:37011751/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:12516253/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:10400163/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:27427047/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:27573839/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:33937829/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:35189922/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:20261939/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:20075806/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:19861200/1‑67 TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCT > 1:16272288/1‑67 CCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTg < 1:4021802/66‑2 GCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCGTTCGTTTTCTACTTTGTAAACGAAGCGCCAa > 1:35029179/1‑67 TCTCTCGGGTGATTTAAATAGTGAATGGCGCGTTCGTTTTCTACTTTGTAAACGAAGCGCCCTTCACT > 1:9483116/1‑68 TCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTGTACTTTGTAAACGAAGCGCCATTCACGAT > 1:33239080/1‑68 TCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTTCTTTGTAAACGAAGCGCCATTCAGTAT > 1:4216737/1‑68 TCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTATACGAAGCGCCATTCACTtt > 1:14094936/1‑66 TCTCGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTAT > 1:22413418/1‑68 CGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTA > 1:18847771/1‑68 CGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTA > 1:15975445/1‑68 CGGGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATGTA > 1:11726038/1‑68 GGTGATTTAAATAGTGAATGGCGCTTTGGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTTAA > 1:12732608/1‑68 GGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAA > 1:31410088/1‑68 GGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAA > 1:34757813/1‑68 GGTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAA > 1:31456159/1‑68 GTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAAGGAAGCGCCATTGACTAGTTAAA > 1:2161989/1‑67 GTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAA > 1:22271950/1‑67 GTGATTTAAATAGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAA > 1:8338847/1‑67 AGTGAATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGA > 1:27553659/1‑68 acTGGCGC‑TTCGGTTTCAACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGC < 1:30458349/66‑1 ATGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACT > 1:9161679/1‑66 TGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT < 1:24519651/68‑1 TGGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT < 1:21427821/68‑1 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCCCCCGAGAGAACTGCT > 1:30479647/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCCCCCGAGAGAACTGCT > 1:25332424/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGACCTGCT > 1:7610924/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:11748524/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:15194537/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:5137950/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:38522028/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:7768443/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:34265946/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:30619239/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:13040895/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:17177342/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:2783854/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:13658309/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:19703330/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:22549091/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:22930560/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:24541444/1‑67 GGCGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCT > 1:23296381/1‑67 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCCCCCGAGAGAACTGCTGCA > 1:35858791/1‑68 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:33948881/1‑68 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:11300953/1‑68 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:14241195/1‑68 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:23568233/1‑68 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:4604933/1‑68 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:25209730/1‑68 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:28408910/1‑68 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:37710182/1‑68 CGCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGA < 1:4437545/59‑1 GCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:21051577/1‑67 GCTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCA > 1:9889565/1‑67 CTTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCAT > 1:6395195/1‑67 TTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCATCC > 1:8027429/1‑68 TTTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCATCC < 1:28470968/68‑1 GCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4046720‑4046794‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcgcttTCGTTTTCTACTTTGTAAACGAAGCGCCATTCACTATTTAAATCACCCGAGAGAACTGCTGCATCC < CP009273/4046815‑4046750 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |