| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4046794 | 484 (1.030) | 26 (0.070) | 9/94 | NT | 5.5% | intergenic (+16/+213) | hemN/yshB | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent/uncharacterized protein |
| ? | CP009273 | = 4046815 | 487 (1.230) | intergenic (+37/+192) | hemN/yshB | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent/uncharacterized protein | |||||
Only 100 of 854 total aligned reads displayed.
TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGG > CP009273/4046727‑4046859 | tACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT < 1:8358972‑M1/68‑1 (MQ=255)tACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTT < 1:17661328‑M1/68‑1 (MQ=255) aCCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTc > 1:26618542/1‑68 (MQ=255) aCCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTc > 1:25488173/1‑68 (MQ=255) aCCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTc > 1:30156949/1‑68 (MQ=255) aCCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTc > 1:31896243/1‑68 (MQ=255) aCCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTc > 1:2892181/1‑68 (MQ=255) aCCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTc > 1:28429604/1‑68 (MQ=255) aCCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTc > 1:13805703/1‑68 (MQ=255) aCCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTc > 1:24509567/1‑68 (MQ=255) ccTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCg < 1:4957595/68‑1 (MQ=255) ccTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCg < 1:33280533/68‑1 (MQ=255) cTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGt > 1:37730736/1‑68 (MQ=255) tATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGtt < 1:14984701/68‑1 (MQ=255) tCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGttt > 1:23645177/1‑67 (MQ=255) tCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGttt > 1:31128228/1‑67 (MQ=255) tCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGttt > 1:19379492/1‑67 (MQ=255) tCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGttt > 1:6343379/1‑67 (MQ=255) tCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGttt > 1:26951303/1‑67 (MQ=255) tCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGttt > 1:27260796/1‑67 (MQ=255) tCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGttt > 1:15633693/1‑67 (MQ=255) tCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGttt > 1:14576586/1‑67 (MQ=255) tCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGttt > 1:13250838/1‑67 (MQ=255) tCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGttt > 1:30714232/1‑67 (MQ=255) cTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTAc > 1:33184230/1‑68 (MQ=255) cTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTAc < 1:1131344/68‑1 (MQ=255) tGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACa > 1:9295139/1‑68 (MQ=255) tGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTAAATGGCGCTTCGTTTACa > 1:37206936/1‑68 (MQ=255) gcgcCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACaa > 1:21162439/1‑68 (MQ=255) gcCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAg > 1:1015373/1‑68 (MQ=255) ccAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGt > 1:38233392/1‑68 (MQ=255) ccAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGt > 1:33982281/1‑68 (MQ=255) cAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGt < 1:5194501/67‑1 (MQ=255) cAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGt < 1:7482992/67‑1 (MQ=255) cAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGt < 1:25059491/67‑1 (MQ=255) cAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTa < 1:11947964/68‑1 (MQ=255) aaaGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGaa > 1:36215169/1‑68 (MQ=255) aaGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGa < 1:35592618/66‑1 (MQ=255) aTGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaag > 1:32884639‑M2/1‑64 (MQ=255) tGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACGAAGTAGAAAACGAaagcg > 1:25283560‑M2/1‑63 (MQ=255) agcagTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgcc > 1:22549091‑M2/1‑60 (MQ=255) agcagTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgcc > 1:7768443‑M2/1‑60 (MQ=255) gcagTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTTGAAACCGAagcgccagt < 1:30458349‑M2/68‑10 (MQ=255) agTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATc < 1:10878897/67‑1 (MQ=255) agTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCa > 1:16425110/1‑68 (MQ=255) tctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCaa < 1:8104162/66‑1 (MQ=255) tctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCaa < 1:674102/66‑1 (MQ=255) tctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCaa < 1:8683319/66‑1 (MQ=255) tctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATAAAtg > 1:2008104/1‑68 (MQ=255) ctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt < 1:17382570/68‑1 (MQ=255) ctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt < 1:18503330/68‑1 (MQ=255) ctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt < 1:12317653/68‑1 (MQ=255) tctcGGGTGATTTAAATAGTGAATGGCGCTTtcgttttctactttgtaaacgaagcgccattcactat > 1:25840857‑M1/1‑31 (MQ=255) tctcGGGTGATTTAAATAGTGAATGGCGCTTtcgttttctactttgtaaacgaagcgccattcactat > 1:35976856‑M1/1‑31 (MQ=255) ctcGGGTGATTTAAATAGTGAATGTCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgaga > 1:26250272/1‑65 (MQ=255) ctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGc < 1:7059404/68‑1 (MQ=255) cGGGTGATTTAAATAGTGAATGGCGCTTtcgttttctactttgtaaacgaagcgccattcactattta > 1:7960897‑M1/1‑28 (MQ=255) cGGGTGATTTAAATAGTGAATGGCGCTTtcgttttctactttgtaaacgaagcgccattcactattta > 1:18847771‑M1/1‑28 (MQ=255) gggTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTga < 1:16146673/68‑1 (MQ=255) gTGATTTAAATAGTGAATGGCGCTTtcgttttctactttgtaaaggaagcgccattgactagttaaa > 1:2161989‑M1/1‑25 (MQ=255) gTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCG‑CATCAATGTGCTgaga < 1:9794543/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:4695155/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:4294612/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:12811964/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:36831965/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:23453977/67‑1 (MQ=255) tttAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgccattcactatttaaatcacc > 1:38814230‑M2/1‑42 (MQ=255) tttAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgccattcactatttaaatcacc > 1:31410088‑M2/1‑42 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:20691160/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:21955869/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:18112249/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:11049874/1‑67 (MQ=255) tAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:11680482/1‑67 (MQ=255) tAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:21371451/1‑67 (MQ=255) tAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:34691536/1‑67 (MQ=255) tAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:29716581/1‑67 (MQ=255) aGTGAATGGCGCTTtcgttttctactttgtaaacgaagcgccattcactatttaaatcacccgagaga > 1:27553659‑M1/1‑14 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:33681951/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:5712035/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:27795299/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:16835571/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:13548166/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:24225833/1‑66 (MQ=255) aGTGAAGGGCGCTTCGTTTACAAAGTAGAAAACGAacgcgccattcactatttaaatcacccgagaga > 1:9483116‑M2/1‑35 (MQ=255) tGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTg > 1:26051727/1‑68 (MQ=255) gAATGGCGCTTCGTTTACAAAGTAGAAAACGTAAGCGCCATCAATGTGCTGAGAACAAGATTGCCt < 1:3249017/66‑1 (MQ=255) gAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGa > 1:24731190/1‑68 (MQ=255) aTGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGAt > 1:28278668/1‑67 (MQ=255) ggCGCTTtcgttttctactttgtaaacgaagcgccattcactatttaaatcacccgagagaactgct > 1:38522028‑M1/1‑7 (MQ=255) ggCGCTTtcgttttctactttgtaaacgaagcgccattcactatttaaatcacccgagagaactgct > 1:22930560‑M1/1‑7 (MQ=255) ggCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc > 1:10359483/1‑67 (MQ=255) cgcTTtcgttttctactttgtaaacgaagcgccattcactatttaaatcacccgagagaactgctgca > 1:14241195‑M1/1‑5 (MQ=255) gcTTCGTTTACAAAGTAGTAAACGAAAGCGCCATCATTTTGCTGTTAACAAGATTGCCTGATGCGCt < 1:22183484/67‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:19841449/67‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:4072312/67‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:15292795/67‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:23218001/67‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:35184647/67‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:35006322/67‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:34296015/67‑1 (MQ=255) | TACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGG > CP009273/4046727‑4046859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |