| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4046794 | 484 (1.030) | 26 (0.070) | 9/94 | NT | 5.5% | intergenic (+16/+213) | hemN/yshB | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent/uncharacterized protein |
| ? | CP009273 | = 4046815 | 487 (1.230) | intergenic (+37/+192) | hemN/yshB | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent/uncharacterized protein | |||||
Only 100 of 675 total aligned reads displayed.
GCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAATTAT > CP009273/4046748‑4046882 | gcgGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGa > 1:30983287/1‑68 (MQ=255) tGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcg > 1:14241195‑M2/1‑63 (MQ=255) tGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcg > 1:28408910‑M2/1‑63 (MQ=255) tGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcg > 1:11300953‑M2/1‑63 (MQ=255) agcagTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgcc > 1:11673038‑M2/1‑60 (MQ=255) agcagTTCTCTCGGGGGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgcc > 1:30479647‑M2/1‑60 (MQ=255) cagTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATc > 1:35442420/1‑68 (MQ=255) agTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATc < 1:628214/67‑1 (MQ=255) agTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATc < 1:19474890/67‑1 (MQ=255) agTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATc < 1:26412062/67‑1 (MQ=255) agTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATc < 1:36160451/67‑1 (MQ=255) agTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCa > 1:12343717/1‑68 (MQ=255) agTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCa > 1:26127978/1‑68 (MQ=255) tctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgccattcact > 1:27553659‑M2/1‑54 (MQ=255) tctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCaa < 1:8104162/66‑1 (MQ=255) tctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCaa < 1:8683319/66‑1 (MQ=255) tctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtg > 1:13373582/1‑68 (MQ=255) tctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtg > 1:33188475/1‑68 (MQ=255) gctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCaa < 1:29116074/65‑1 (MQ=255) ctctcGGGTGATTTAAATAGTGACTGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt < 1:6655686/68‑1 (MQ=255) ctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt < 1:18503330/68‑1 (MQ=255) ctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt < 1:15218355/68‑1 (MQ=255) ctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt < 1:16231053/68‑1 (MQ=255) ctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt < 1:37030418/68‑1 (MQ=255) ctctcGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAAtgt < 1:12937424/68‑1 (MQ=255) tctcGGGTGATTTAAATAGTGAATGGCGCTTCGATTACAAAGTAGAAAACGAAAGCGCCATCAAtgt > 1:5575057/1‑67 (MQ=255) ggTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgag > 1:22373039/1‑68 (MQ=255) ggTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgag > 1:23220394/1‑68 (MQ=255) ggTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgag > 1:29942361/1‑68 (MQ=255) ggTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgag > 1:8453533/1‑68 (MQ=255) ggTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgag > 1:10339129/1‑68 (MQ=255) gTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCG‑CATCAATGTGCTgaga < 1:9794543/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:22981811/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:14557786/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:2495088/67‑1 (MQ=255) tGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTgaga < 1:38728468/67‑1 (MQ=255) gATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAAc > 1:9174154/1‑68 (MQ=255) gATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAAc > 1:24493050/1‑68 (MQ=255) tttAACTAGTCAATGGCGCTTCCTTTACAAAGTAGAAAACGAaagcgccattcactatttaaatcac > 1:2161989‑M2/1‑42 (MQ=255) tttAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAaagcgccattcactatttaaatcacc > 1:31410088‑M2/1‑42 (MQ=255) ttAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAg < 1:34303971/68‑1 (MQ=255) aaaTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAt < 1:24242588/68‑1 (MQ=255) aaaTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAt < 1:17003036/68‑1 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:2216971/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:5979576/1‑67 (MQ=255) aTAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGAtt > 1:25920260/1‑67 (MQ=255) tAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:25773170/1‑67 (MQ=255) tAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:3934107/1‑67 (MQ=255) tAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:9492565/1‑67 (MQ=255) tAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:34691536/1‑67 (MQ=255) tAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGc < 1:420349/68‑1 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACTAAAGCGCCATCAATGTGCTGAGAACAAGAttt > 1:19062103/1‑65 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:38041392/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:13712817/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:1569582/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:18126371/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:27795299/1‑66 (MQ=255) aGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTg > 1:26814432/1‑66 (MQ=255) gAATGGCGCTTCGTTTACAAAGTAGAAAACGTAAGCGCCATCAATGTGCTGAGAACAAGATTGCCt < 1:3249017/66‑1 (MQ=255) gAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCt < 1:14677933/66‑1 (MQ=255) gAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCt < 1:4589172/66‑1 (MQ=255) gAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCt < 1:7654107/66‑1 (MQ=255) gAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGa > 1:24731190/1‑68 (MQ=255) gAATGGCGCTTCGTTAACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCt < 1:21346257/66‑1 (MQ=255) aTGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGAt > 1:11877369/1‑67 (MQ=255) tGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc < 1:164570/68‑1 (MQ=255) ggCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc > 1:5144721/1‑67 (MQ=255) ggCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc > 1:7863237/1‑67 (MQ=255) gcgcTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc > 1:219188/1‑66 (MQ=255) gcgcTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc > 1:10986021/1‑66 (MQ=255) gcgcTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc > 1:10163432/1‑66 (MQ=255) gcgcTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc > 1:22633831/1‑66 (MQ=255) gcgcTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATgc > 1:1997142/1‑66 (MQ=255) gcTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTg > 1:35864961/1‑68 (MQ=255) gcTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTg > 1:2727545/1‑68 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:37516702/67‑1 (MQ=255) ttCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTgg < 1:19841449/67‑1 (MQ=255) cGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGca < 1:21034763/68‑1 (MQ=255) cGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGca > 1:20382301/1‑68 (MQ=255) cGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGca < 1:32920942/68‑1 (MQ=255) gTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGcaa < 1:7156215/68‑1 (MQ=255) gTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGcaa < 1:28033576/68‑1 (MQ=255) ttACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGcaac < 1:17667837/67‑1 (MQ=255) aaaGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACaaaa > 1:34952753/1‑67 (MQ=255) aaaGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACaaaa > 1:10820882/1‑67 (MQ=255) aaaGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACaaaa > 1:33991483/1‑67 (MQ=255) aGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACaaaa > 1:36657443/1‑65 (MQ=255) aGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCt < 1:23827682/68‑1 (MQ=255) gTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACaaaa > 1:33438506/1‑64 (MQ=255) gTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACaaaa > 1:27043830/1‑64 (MQ=255) aGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGtt < 1:38405116/68‑1 (MQ=255) aGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGt < 1:6827641/67‑1 (MQ=255) aaaCGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGaa < 1:33753783/68‑1 (MQ=255) aaaCGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGaa < 1:2531748/68‑1 (MQ=255) aaaCGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGaa < 1:15994087/68‑1 (MQ=255) aCGCAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAat > 1:4824423/1‑68 (MQ=255) aCGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAat > 1:29633778/1‑68 (MQ=255) aCGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAat > 1:3191845/1‑68 (MQ=255) aCGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAat > 1:23508664/1‑68 (MQ=255) aCGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAat > 1:3514419/1‑68 (MQ=255) | GCGGATGCAGCAGTTCTCTCGGGTGATTTAAATAGTGAATGGCGCTTCGTTTACAAAGTAGAAAACGAAAGCGCCATCAATGTGCTGAGAACAAGATTGCCTGATGCGCTGGGCAACAAAACCTGTTGAAATTAT > CP009273/4046748‑4046882 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |