| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1023817 = | NA (NA) | 7 (0.020) | 4/84 | NT | NA | intergenic (+2/+43) | yccU/hspQ | putative CoA‑binding protein/heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA‑binding protein |
| ? | CP009273 | 1023851 = | NA (NA) | intergenic (+36/+9) | yccU/hspQ | putative CoA‑binding protein/heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA‑binding protein | |||||
Only 100 of 120 total aligned reads displayed.
CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1023895‑1023817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttccggggatttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATCC > CP009273/1023851‑1023917 CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCT > 1:17508381/1‑68CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCT > 1:19014583/1‑68CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCT > 1:24589594/1‑68CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCT > 1:27473076/1‑68CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCT > 1:11000920/1‑68CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCT > 1:2826330/1‑68CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCT < 1:12755211/68‑1CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCT > 1:11429196/1‑68 GCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTT < 1:32149218/68‑1 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:34678758/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:13011452/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:33838015/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:15442074/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:6830709/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:25848882/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTATGCCTTCCGG > 1:23229432/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTATTGCCTTCCGG > 1:11746746/1‑68 ACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGATTTTGCCTTCCGG > 1:15512238/1‑68 ACAACTCCAGGCCCCGCGCCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGG > 1:5594346/1‑68 CAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGG > 1:3187395/1‑68 CAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGG < 1:32609792/68‑1 AACTCCAGGCTCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGG < 1:16040675/68‑1 AACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGG < 1:36459631/68‑1 ACTCCAGGCCCCGCGTCTGCTTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGA < 1:31359490/68‑1 ACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGA < 1:22429724/68‑1 ACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGA < 1:11775627/68‑1 ACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGA > 1:28876254/1‑68 CTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGAT < 1:6638550/68‑1 TCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATT < 1:20660030/68‑1 CCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTT > 1:553100/1‑68 CCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTT > 1:39133497/1‑68 CCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTT > 1:8456050/1‑68 tGGCCCCGCGTCTGCGTAACTAATCCCTGAACAACTCCCCGGAAGGTTTTTGCCTTCCGGGGATTTGT < 1:22322203/67‑1 CCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTTGT < 1:2848083/65‑1 GCGTCTGCGTAACTAATCCCTGAACAAATCCCCGCAAGGTTTTTGCCTTCCGGGGATTTGTTCAGGGA < 1:27707584/68‑1 CTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTTGTTCAGGGATTA < 1:28081993/67‑1 CTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTTGTTCAGGGATTA < 1:7748315/67‑1 TGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTTGTTCAGGGATTAGT < 1:14137142/68‑1 GTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTTGTTCAGGGATTAGTTAC < 1:10261540/68‑1 aacCCTTCCGGGGATTTGTTCAGTGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGT < 1:17660959/65‑1 cCCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGG > 1:1748990/2‑65 CCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTG < 1:7055083/68‑1 CCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTG < 1:14406431/68‑1 CCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCT > 1:17148831/1‑67 CCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCT > 1:38401537/1‑67 CCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCT > 1:30362691/1‑67 CCTTCCGGGGATTTGTTAAGGGATTAGTTACGAAGACGCGGGGCCTGGAGTTGCTTGCGGATGGTCT > 1:15151328/1‑67 caTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:33496858/66‑1 CTTCGGGGGATTTGTTCAGGGATTAGTAACGCTGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:10736367/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:2215940/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:20970045/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:4239864/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:36050757/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:27927096/68‑1 CTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGC < 1:14652631/68‑1 CGGGGATTTGTTCAGGGATTAGATACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCA < 1:32385261/68‑1 GGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAG < 1:13064110/68‑1 GGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAG < 1:29768542/68‑1 GGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAG < 1:33224749/68‑1 GGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAG < 1:16367700/68‑1 GGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAG < 1:10672685/68‑1 GGGGATTTGTTCAGGGAATAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGAAGGTCTGCGCCAG < 1:8387425/68‑1 GGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCA > 1:38578731/1‑66 GGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGC < 1:8070336/67‑1 GATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCT < 1:3656650/67‑1 GATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCT < 1:19882011/67‑1 TTTGTTCATGGATTAGTTACGCAGACGCTGGGCCTGGATTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:22709606/67‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCATCTCAT < 1:34839574/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:38064200/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:29906019/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:11188988/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:10180622/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:17249337/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:31296206/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:18368930/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:29042575/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:16979187/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAT < 1:16492068/68‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:12128295/67‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:2870186/67‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:15213048/67‑1 TTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCA < 1:20658275/67‑1 TTGTTCAGGGTTTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:20433627/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:16432252/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:8183256/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:18565580/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:19147177/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:20614220/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:22682736/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:39021894/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:14419555/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:24416418/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:25765264/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:37152484/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:11308144/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:27779924/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:14476557/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATC < 1:33486194/68‑1 TTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGGCTGCGCCAGCTCATC < 1:1037688/68‑1 TGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCTCCAGCTCATCC > 1:13640977/1‑68 CGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1023895‑1023817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttccggggatttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATCC > CP009273/1023851‑1023917 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |