| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1023817 = | NA (NA) | 7 (0.020) | 4/84 | NT | NA | intergenic (+2/+43) | yccU/hspQ | putative CoA‑binding protein/heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA‑binding protein |
| ? | CP009273 | 1023851 = | NA (NA) | intergenic (+36/+9) | yccU/hspQ | putative CoA‑binding protein/heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA‑binding protein | |||||
Only 100 of 473 total aligned reads displayed.
TGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATCCA > CP009273/1023785‑1023918 | tGAGCTCCCTCGCCTGGGCCGGGCCAAATAAAAAATCCCCGGACGGCAAAAACCTTCCGGGGATTTGt > 1:28610303/1‑68 (MQ=255)tGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGt < 1:712153/68‑1 (MQ=255)tGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGt < 1:31549689/68‑1 (MQ=255)tGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGt < 1:32631563/68‑1 (MQ=255)tGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCACCGGAAGGCAAAAACCTTCCGGGGATTTGt < 1:35668305/68‑1 (MQ=255) agaTCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGtg > 1:28386439/1‑66 (MQ=255) agaTCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTc > 1:22574168/1‑68 (MQ=255) agaTCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTc > 1:28144687/1‑68 (MQ=255) agaTCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTc > 1:15202531/1‑68 (MQ=255) agaTCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTc > 1:3220703/1‑68 (MQ=255) agaTCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTc > 1:1391338/1‑68 (MQ=255) agaTCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTc > 1:3455577/1‑68 (MQ=255) agaTCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTc > 1:5690518/1‑68 (MQ=255) agaTCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTc > 1:5951947/1‑68 (MQ=255) agaTCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTc > 1:17952289/1‑68 (MQ=255) agaTCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTc > 1:8345279/1‑68 (MQ=255) tCCCTCGCCTGTGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAg < 1:33922231/67‑1 (MQ=255) tCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGTTTTGTTCAgg > 1:10457228/1‑68 (MQ=255) tCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAgg > 1:18637090/1‑68 (MQ=255) tCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAgg > 1:22928734/1‑68 (MQ=255) tCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAgg < 1:1989382/68‑1 (MQ=255) tCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAgg < 1:25215004/68‑1 (MQ=255) tCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAgg > 1:18365857/1‑68 (MQ=255) tCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAgg < 1:28001249/68‑1 (MQ=255) tCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAgg > 1:31268244/1‑68 (MQ=255) tCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAgg > 1:12898984/1‑68 (MQ=255) tCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAgg > 1:12665764/1‑68 (MQ=255) tCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAgg > 1:10272696/1‑68 (MQ=255) ccTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGa < 1:34222879/68‑1 (MQ=255) ccTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGa < 1:6499643/68‑1 (MQ=255) ccTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGa < 1:8887451/68‑1 (MQ=255) gggctgggcctggCCAAATTAAAAATCCCCGGTTGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTa < 1:4672154/65‑1 (MQ=255) cGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTa < 1:10097437/68‑1 (MQ=255) cGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTa < 1:30985558/68‑1 (MQ=255) gcctgggcctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAg > 1:25726773/1‑68 (MQ=255) gcctgggcctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAg < 1:21214605/68‑1 (MQ=255) cctgggcctggCCAAATAAAAAATCCCCGTAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGt > 1:8501745/1‑68 (MQ=255) ctgggcctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGtt > 1:21443023/1‑68 (MQ=255) ctgggcctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGt < 1:14718467/67‑1 (MQ=255) gtaactaatccctgaacAAATCCCCGGTAGGGAAAAACCGTGCGGGGATTTGTTCAGGGTTTAGTTAc < 1:3825162‑M1/51‑1 (MQ=255) gcctggCCAAATAAAAAATCCCCGGAAGGCAAAACCCTTCCGGGGATTTGTTCAGGGATTAGTTACGc > 1:15709182/1‑68 (MQ=255) gcctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGc > 1:19538587/1‑68 (MQ=255) gcctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGc > 1:1914947/1‑68 (MQ=255) gcctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGc > 1:20202281/1‑68 (MQ=255) gcctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGc > 1:11357642/1‑68 (MQ=255) cctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCa > 1:23968157/1‑68 (MQ=255) cctggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCa > 1:37236105/1‑68 (MQ=255) tggACAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGa < 1:1501031/68‑1 (MQ=255) taatccctgaacAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAg < 1:7748315‑M1/55‑1 (MQ=255) ggCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGAc < 1:34911248/68‑1 (MQ=255) gCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGAc > 1:16071714/1‑67 (MQ=255) ccAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGAcgc > 1:10944483/1‑68 (MQ=255) aataaaaaTCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCgggg < 1:24366999/65‑1 (MQ=255) aTAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCgggg < 1:11195596/68‑1 (MQ=255) aTAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCgggg < 1:20534683/68‑1 (MQ=255) tAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGTATTTGTTCAGGGATTAGTTACGCAGACGCGGGGc < 1:11922474/68‑1 (MQ=255) tAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGc < 1:10693166/68‑1 (MQ=255) tAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGc < 1:26951140/68‑1 (MQ=255) tAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGc < 1:14832216/68‑1 (MQ=255) tAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGc < 1:25939/68‑1 (MQ=255) tAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGc < 1:2993998/68‑1 (MQ=255) acAAATCCCCGGAAGGCAAAAACCTTCCGGGGAGTTGTTCAGGGATTAGTTACGCAGACGCGGGgcca < 1:22322203‑M1/66‑2 (MQ=255) aaaaaTCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCt < 1:29715904/68‑1 (MQ=255) AAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTgg > 1:39133497‑M1/1‑68 (MQ=255) AAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTgg < 1:26492972‑M1/68‑1 (MQ=255) AATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGa < 1:20660030‑M1/68‑1 (MQ=255) TCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTAAGCAGACGCGGGGCCTGGAgt < 1:31359490‑M1/68‑1 (MQ=255) CCGGAAGGCATAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAgttgt > 1:23229432‑M1/1‑68 (MQ=255) CCGGAAGGCAATAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAgttgt > 1:11746746‑M1/1‑68 (MQ=255) CCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAgttgt > 1:6830709‑M1/1‑68 (MQ=255) AGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCg > 1:24589594‑M1/1‑68 (MQ=255) cAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGa < 1:3050793/67‑1 (MQ=255) aaaaCCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATgg > 1:5295799/1‑68 (MQ=255) aacccttccggggatttGTTCAGTGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGt < 1:17660959‑M2/51‑1 (MQ=255) aaaCCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATggg < 1:14304233/68‑2 (MQ=255) aaaCCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGt < 1:27592769/68‑1 (MQ=255) aaaCCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGt < 1:13108403/68‑1 (MQ=255) cccttccggggatttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATgg > 1:1748990‑M2/16‑65 (MQ=255) aCCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATgg > 1:32012714/1‑65 (MQ=255) aCCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATgg > 1:4069835/1‑65 (MQ=255) aCCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATgg > 1:30331971/1‑65 (MQ=255) ccttccggggatttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCt > 1:17148831‑M2/15‑67 (MQ=255) ccatccggggatttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTg < 1:29363221‑M2/54‑1 (MQ=255) cttcgggggatttGTTCAGGGATTAGTAACGCTGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTgc < 1:10736367‑M2/55‑1 (MQ=255) cttccggggatttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTgc < 1:20970045‑M2/55‑1 (MQ=255) cttccggggatttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTgc < 1:36050757‑M2/55‑1 (MQ=255) cggggatttGTTCAGGGATTAGATACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCa < 1:32385261‑M2/59‑1 (MQ=255) ggggatttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAg < 1:33224749‑M2/60‑1 (MQ=255) gggatttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCa > 1:38578731‑M2/8‑66 (MQ=255) ggatttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGc < 1:739631‑M2/61‑1 (MQ=255) gatttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCt < 1:3656650‑M2/62‑1 (MQ=255) tttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCa < 1:12128295‑M2/64‑1 (MQ=255) tttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAt < 1:16492068‑M2/65‑1 (MQ=255) tttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCAt < 1:29042575‑M2/65‑1 (MQ=255) ttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATc < 1:8183256‑M2/66‑1 (MQ=255) ttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATc < 1:27779924‑M2/66‑1 (MQ=255) ttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATc < 1:14476557‑M2/66‑1 (MQ=255) ttGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATc < 1:33486194‑M2/66‑1 (MQ=255) tGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCTCCAGCTCATcc > 1:13640977‑M2/2‑68 (MQ=255) gTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATCCa < 1:37653547/68‑1 (MQ=255) | TGAGATCCCTCGCCTGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTCTGCGCCAGCTCATCCA > CP009273/1023785‑1023918 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |