| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1685627 = | 145 (0.310) | 15 (0.040) | 9/88 | NT | 11.6% | intergenic (+10/+216) | ydgA/uidC | DUF945 family protein/putative outer membrane porin for beta‑glucuronides porin protein |
| ? | CP009273 | 1685659 = | NA (NA) | intergenic (+42/+184) | ydgA/uidC | DUF945 family protein/putative outer membrane porin for beta‑glucuronides porin protein | |||||
Only 100 of 132 total aligned reads displayed.
CTGATAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1685704‑1685627‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctccggcgttttCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACAC > CP009273/1685659‑1685725 CTGATAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCT < 1:36869974/68‑1CTGATAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTC > 1:26418191/1‑67CTGATAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTC > 1:37045586/1‑67CTGATAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTC > 1:6904644/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:4623283/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:24668663/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:23651475/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:23429709/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:30364292/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:38184636/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:4920816/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:14527516/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:5948094/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:6398110/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:6737571/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:11909639/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:1185215/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:10847086/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTATTCAGATGAAAACGCCGGAGTGAAAATTCTCCG > 1:10419686/1‑67 TAAGCGTAGCGCATCAGGCAATCTCTGGTGTGTTTTCAGATGGAAACGGGGGAGTGAAAATTCTCCG > 1:8724084/1‑67 AAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGC > 1:14314652/1‑68 AAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGC > 1:25049916/1‑68 AGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCG > 1:10393576/1‑68 AGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCG > 1:16722378/1‑68 AGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCG < 1:1676305/68‑1 AGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCG < 1:27069610/68‑1 AGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCG > 1:27096048/1‑68 AGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCG < 1:31853761/68‑1 AGCGTAGCGCATCAGGCAATCTCTGCTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCG < 1:7181847/68‑1 AGCGTAGCGCATCAGGCAATCTATGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCG > 1:10996098/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:32883427/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:32469398/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:32156242/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:33499110/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:8862923/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:27714104/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:8456525/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:38415408/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:9487614/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:26796461/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:9659626/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:8189815/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:5352691/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:21131239/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:17977929/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:175825/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:16833947/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:18570905/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:20016173/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:15662486/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:2066069/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:21212265/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:14076707/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:11178276/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:10460938/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTT < 1:11156126/67‑1 GTAGCGCATCAGGCAATCTCTGGTTTGTTTTAAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:24666731/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTTGCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTT > 1:6976606/1‑68 GTAGCGCATCAGGCAATCTCTGGTTTGTTCTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGT < 1:11951463/66‑1 GCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTTTCATC < 1:10923414/68‑1 GCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTTTCATC < 1:38383458/68‑1 GCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTC > 1:16243099/1‑48 CAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTTTCATCTGAAAAC < 1:35634042/67‑1 CAATCTCTGGGCTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTTTCATCTGAAAAC < 1:5737450/67‑1 agCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGGGAAAATTCACCGGCGTTTTCATCTGAAAACAAA < 1:34559773/66‑1 TCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTTTCATCTGAAAACAAAC < 1:6218469/68‑1 TCTCTGGTTTGTATTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTTTCATCTGAAAACAAAC < 1:24269794/68‑1 CTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTTTCATCTGAAAACAAACCAG < 1:30035381/68‑1 TGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTTTCATCTGAAAACAAACCAGA < 1:34511788/68‑1 TGTTTTCAGACCAAAACGCCGGAGTGAAAATTCTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTG < 1:1023323/68‑1 GTTTGCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGC < 1:38871733/68‑1 GTGAAAATTCTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAG > 1:6299855/1‑67 CTCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTT > 1:11362484/1‑68 TCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTT < 1:30431659/68‑1 TCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTT > 1:20619532/1‑67 TCCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTT > 1:566171/1‑67 CCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTC < 1:9148686/68‑1 CCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTC < 1:36249069/68‑1 CCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTC < 1:30103822/68‑1 CCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTT > 1:21440256/1‑67 CCGGCGTTTTCATCTGAAAACAAACCAGAGATTGCCGGATGCGCTACGCTTATCAGGCCTACCTTTTC < 1:24020961/68‑1 GGCGTTTTCATCTGAAAACAAACCAGAGCTTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTT > 1:37649152/1‑65 GGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCT < 1:38531429/68‑1 GGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCT < 1:23288542/68‑1 GGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCT < 1:23738916/68‑1 GGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCT < 1:12528922/68‑1 GGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCT < 1:16046015/68‑1 GGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCT < 1:32790546/68‑1 GGCGTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTT > 1:12401690/1‑65 GTTTTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCA > 1:495482/1‑68 TTTCATCTGAAAACAAACCAGAGATTGCCTGATGAGCTACGCTTATCAGGCCTACCGTTTCCTGCAAC > 1:31476638/1‑68 TTCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACA < 1:8304331/68‑1 TCATCTTAAAACAAACCAGAGATTGCCTGTGGCGCTACGCTTATCAGGCCTATCTTTTCCTGCAACAC < 1:7292074/68‑1 TCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACAC < 1:17968458/68‑1 TCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACAC < 1:21880877/68‑1 TCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACAC < 1:789821/68‑1 TCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACAC < 1:37709280/68‑1 TCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACAC < 1:3655903/68‑1 TCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACAC < 1:35982125/68‑1 TCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAAC > 1:14393204/1‑66 CTGATAAGCGTAGCGCATCAGGCAATCTCTGGTTTGTTTTCAGATGAAAACGCCGGAGTGAAAATTCTCCGGCGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1685704‑1685627‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctccggcgttttCATCTGAAAACAAACCAGAGATTGCCTGATGCGCTACGCTTATCAGGCCTACCTTTTCCTGCAACAC > CP009273/1685659‑1685725 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |