| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1821389 | 323 (0.680) | 18 (0.050) | 11/94 | NT | 6.8% | coding (1128/1344 nt) | astB | succinylarginine dihydrolase |
| ? | CP009273 | = 1821423 | 224 (0.570) | coding (1094/1344 nt) | astB | succinylarginine dihydrolase | |||||
Only 100 of 165 total aligned reads displayed.
AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/1821316‑1821389‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggcgtGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA < CP009273/1821423‑1821358 AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:5117673/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:37957907/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:1793294/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:34165190/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:24496002/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:14902952/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:25242035/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:25263425/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:32874177/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:28068509/1‑67 ACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCC < 1:7446201/68‑1 ACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCC > 1:10252458/1‑68 cgcTCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:35513536/4‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:33973767/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:20641501/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:24673440/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:27105050/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:24382830/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:35167743/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:22023869/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:31372781/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:13577027/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:4426674/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:15087182/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:16214616/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:17402348/1‑68 GATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:32149132/1‑67 ATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC > 1:35031229/1‑68 ATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC > 1:16005094/1‑68 ATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC > 1:21414641/1‑68 ATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC > 1:6633796/1‑68 ATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC > 1:31423021/1‑68 ATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC > 1:12258496/1‑68 ATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCCCCCGGC > 1:4228982/1‑68 ATCCACCCAGTCATTGAGCGCATTAAACAGCGTACCGTTCATCATCACCGCCGGATTCACCGCCCGGC > 1:11039202/1‑68 ATCAACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC > 1:37685834/1‑68 TCCACCCGGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:17031390/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG > 1:4147051/1‑68 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG > 1:29859390/1‑68 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG < 1:9116597/68‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG > 1:8664300/1‑68 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG < 1:6984660/68‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG > 1:4414544/1‑68 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG < 1:9722855/68‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG < 1:18824388/68‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG > 1:13595939/1‑68 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG > 1:14446372/1‑68 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:29252857/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:35362295/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:22115737/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:35584568/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:3368534/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:20421889/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:13452830/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:1107774/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTAGCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:30867613/67‑1 CACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGT > 1:37008292/1‑67 CCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGgg > 1:36576367/1‑63 CATTGAGCGCATTAAACAGCGTATCTATCATCATCACCGCCGGATTCACCGCCCGGCGTGCCTGCGGa > 1:14723634/1‑67 CAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTGCCTGCGGGTGCGGGTGGGATTGAC > 1:26865928/1‑68 GTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACA < 1:29528093/65‑1 GTTCATCATCACCGCCGGATTCACCGCCCGGCGTGCCGGCGGTTGGGGGTGGTATTGAGAGAAGAAGA > 1:28796457/1‑68 CATCATCACCGCCGGATTCACCGCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACG < 1:300839/68‑1 TCACCGCCGGATTCACCGCCCGGCGTGCCGGCGGGTGCGGGGGGTTTTGACAGAAGTAGAACGCCGG > 1:4011463/1‑67 ACCGCCGGATTCACCGCCCGGCGTGCCTGCGGGTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCG > 1:4887684/1‑68 CGGATTCACCGCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAA > 1:33746568/1‑68 TCACCGGCCGGCGTGACTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCG > 1:10046486/1‑67 CCGCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGG > 1:9075166/1‑68 CGCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGT > 1:34193972/1‑68 CGCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGT > 1:32594488/1‑68 CGCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGT > 1:11827375/1‑68 CGCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAACATGAACGCCGGGCGGTGAATCCGGCGGT > 1:38389187/1‑68 GCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTG > 1:32814378/1‑68 CCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA > 1:7881141/1‑68 CCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA > 1:4024094/1‑68 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT > 1:2820/1‑68 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT > 1:16677692/1‑68 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT < 1:22372278/68‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT < 1:38693420/68‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT < 1:25810595/68‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT < 1:23810647/68‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA < 1:38652589/67‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA < 1:29924075/67‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA < 1:32095203/67‑1 CGGCGTGCGTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATG < 1:5938521/68‑1 CGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATG < 1:29335274/68‑1 CGGCGTGCCTGCGGTTGCGGGGGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATG < 1:3625121/68‑1 GGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGA < 1:4187129/68‑1 GGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGA < 1:33141614/68‑1 CGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATG > 1:37851779/1‑68 CGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATG > 1:21900390/1‑68 CGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATG > 1:3594840/1‑68 GTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA < 1:5046794/68‑1 GTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA < 1:20950247/68‑1 GTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA < 1:12207106/68‑1 GTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA > 1:8082261/1‑68 GTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA < 1:28970213/68‑1 GTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACCCCGGGCGGTGAATCCGGCGGTGATGATGA < 1:2886832/68‑1 TGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA > 1:32207960/1‑67 TGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA > 1:22462181/1‑67 AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/1821316‑1821389‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggcgtGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA < CP009273/1821423‑1821358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |