| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1821389 | 323 (0.680) | 18 (0.050) | 11/94 | NT | 6.8% | coding (1128/1344 nt) | astB | succinylarginine dihydrolase |
| ? | CP009273 | = 1821423 | 224 (0.570) | coding (1094/1344 nt) | astB | succinylarginine dihydrolase | |||||
Only 100 of 353 total aligned reads displayed.
GTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTT > CP009273/1821356‑1821490 | gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc > 1:18679323/1‑68 (MQ=255)gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc > 1:29071786/1‑68 (MQ=255)gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc > 1:31944410/1‑68 (MQ=255)gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc > 1:23327964/1‑68 (MQ=255)gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc > 1:38458252/1‑68 (MQ=255)gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc > 1:24058135/1‑68 (MQ=255) ttCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc > 1:6855954/1‑67 (MQ=255) tcatcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCac < 1:28970213‑M2/68‑3 (MQ=255) tcatcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCac < 1:2932587‑M2/68‑3 (MQ=255) tcatcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCac < 1:20950247‑M2/68‑3 (MQ=255) atcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacg < 1:30633178‑M2/67‑4 (MQ=255) tcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgcc < 1:33141614‑M2/68‑6 (MQ=255) catcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCACGCacgccg < 1:5938521‑M2/68‑7 (MQ=255) atcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:38693420‑M2/68‑8 (MQ=255) atcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg > 1:8422072‑M2/1‑61 (MQ=255) atcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:22372278‑M2/68‑8 (MQ=255) atcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:25810595‑M2/68‑8 (MQ=255) tccccgccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCggg < 1:30421542/65‑1 (MQ=255) tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccggg > 1:24866363‑M2/1‑60 (MQ=255) tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:32095203‑M2/67‑8 (MQ=255) tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:4199359‑M2/67‑8 (MQ=255) aCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc > 1:22912135/1‑68 (MQ=255) aCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc > 1:34130238/1‑68 (MQ=255) gccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgcc < 1:18810406/68‑1 (MQ=255) gccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgcc < 1:35342163/68‑1 (MQ=255) cgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccgc < 1:26096969/68‑1 (MQ=255) cgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccg > 1:10032919/1‑67 (MQ=255) ggATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccgcc < 1:29858680/68‑1 (MQ=255) ggATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccgcc < 1:9380288/68‑1 (MQ=255) ggATGCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAAGCGCAGGCACGCCGGgccgccgcc < 1:17592841/68‑1 (MQ=255) aTTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCCCGCCGGGCCGCCGCCAt > 1:21749035/1‑68 (MQ=255) tCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc < 1:20463260/68‑1 (MQ=255) tCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc < 1:36006370/68‑1 (MQ=255) cACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc > 1:2012172/1‑67 (MQ=255) cACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCg < 1:2706229/68‑1 (MQ=255) cACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCg < 1:8700394/68‑1 (MQ=255) aCCGCCCGGGGTTCTTCTTATGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGc < 1:13937013/68‑1 (MQ=255) ccgccgGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGcc < 1:19273485/68‑1 (MQ=255) cGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCACCCGCAGGCacgccgggcggtgaatccggcggt > 1:4887684‑M2/1‑44 (MQ=255) ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgggcggtgaatccggcggtga > 1:10317050‑M2/1‑41 (MQ=255) ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc < 1:24537708/68‑1 (MQ=255) ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc < 1:38150740/68‑1 (MQ=255) ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc < 1:38346086/68‑1 (MQ=255) ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGAAGGCACGCCGGGCCGCCGCCATTCGCCATGc < 1:23624306/68‑1 (MQ=255) ccGGCGTTCTACTTCTGTCAAAACCCCCCGCACCCGCCGGCacgccgggcggtgaatccggcggtga > 1:4011463‑M2/1‑41 (MQ=255) cGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGTGCCGCCGCCATTCGCCATGCt < 1:32536257/68‑1 (MQ=255) cGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCt < 1:27320107/68‑1 (MQ=255) cGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCt < 1:19541689/68‑1 (MQ=255) cGGAGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCt < 1:29967755/68‑1 (MQ=255) cGTTCTTCTTCTGTCAAAACCACCCGCACCCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCttt > 1:8995967/1‑67 (MQ=255) ggtcttcttctGTCAATACCACCCGCCACCGCCGGCACGCCGGGCCGCCGCCATTCGCCTTGCGTTc > 1:20747552/3‑67 (MQ=255) tcttcttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCAc < 1:11743802/67‑1 (MQ=255) tcttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTaa > 1:33730555/1‑68 (MQ=255) tcttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTaa > 1:32794110/1‑68 (MQ=255) cttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTaaa < 1:25242411/68‑1 (MQ=255) ttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAAt < 1:5205185/68‑1 (MQ=255) ttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAAt < 1:12787582/68‑1 (MQ=255) ttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAAt < 1:24267088/68‑1 (MQ=255) tctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATc > 1:34316595/1‑68 (MQ=255) tctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATc > 1:23127446/1‑68 (MQ=255) tGTCAATACCACCCGCAACCGCAGGCacgccgggcggtgaatccggcggtgatgatgaacgatac < 1:29528093‑M2/65‑40 (MQ=255) gTCAATCCCACCCGCACCCGCAGGCacgccgggcggtgaatccggcggtgatgatgaacgatacgctg > 1:26865928‑M2/1‑25 (MQ=255) cccacTACCACCCGCCCCCGCAGGCacgccgggcggggaatccggcggtgatgatgaacgatacgctg > 1:16584248‑M2/3‑25 (MQ=255) cAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAg > 1:33424230/1‑67 (MQ=255) cAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAg > 1:31094972/1‑67 (MQ=255) aTACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACt < 1:17292664/68‑1 (MQ=255) aTACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACt < 1:36641001/68‑1 (MQ=255) tACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtt > 1:13000639/1‑68 (MQ=255) accaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCCTGCTTTCACGTAAATCAAAGACttt > 1:35736608/1‑68 (MQ=255) accaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACttt > 1:1542893/1‑68 (MQ=255) accaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACttt > 1:38604238/1‑68 (MQ=255) ccaccaGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:9863224/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCCTGCTTTCACGGAAATCTCAGACtttt > 1:37225293/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGCCtttt > 1:1684978/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:16103723/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:26711956/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:10801405/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:28034145/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:28509863/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:8073355/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:7929980/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:29486612/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:21546054/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:38780518/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:14869148/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:3769214/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACgttt > 1:18131120/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCGTTCACGTAAATCAAAGACtttt > 1:34905142/1‑68 (MQ=255) ccaccCGCAACCGAAGGCACGCAGGGCCGCAGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:4461968/1‑68 (MQ=255) ccGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGtt < 1:32318498/68‑1 (MQ=255) ccGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGt > 1:33854993/1‑67 (MQ=255) gCACCCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCg < 1:2127213/68‑1 (MQ=255) cAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGtgc > 1:11963141/1‑64 (MQ=255) cAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTc > 1:13609196/1‑66 (MQ=255) ccGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTaa > 1:7102934/1‑68 (MQ=255) gCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATc > 1:11292875/1‑68 (MQ=255) aGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCgg > 1:5713310/1‑68 (MQ=255) ggCAGGCCGGGCCGACGCCATTCGCCATGCTTTCACGTAATTCTAAGTCTTTTAGTTCGCTAATCggg < 1:22309289/68‑1 (MQ=255) gCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGt > 1:36298913/1‑68 (MQ=255) cACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCggg < 1:31579104/66‑1 (MQ=255) | GTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTT > CP009273/1821356‑1821490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |