| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1947764 = | 336 (0.710) | 19 (0.040) | 7/102 | NT | 5.5% | coding (66/972 nt) | cmoB | tRNA (cmo5U34)‑carboxymethyltransferase, carboxy‑SAM‑dependent |
| ? | CP009273 | 1947802 = | 352 (0.820) | coding (104/972 nt) | cmoB | tRNA (cmo5U34)‑carboxymethyltransferase, carboxy‑SAM‑dependent | |||||
ACCGCATTTGACCACTGCTTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1947835‑1947764‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTC > CP009273/1947802‑1947867 ACCGCATTTGACCACTGCTTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGG < 1:28959090/68‑1ACCGCATTTGACCACTGCTAAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGG < 1:1078500/68‑1 CGCATTTGACCACTGCTTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCA < 1:34309480/68‑1 CGCATTTGACCACTGCTTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCA < 1:31111094/68‑1 CGCATTTGACCACTGCTTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCA < 1:37076114/68‑1 CGCATTTGACCACTGCTTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCA < 1:24546105/68‑1 CGCATTTGACCACTGCTTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCA < 1:23246498/68‑1 CGCATTTGACCACTGCTTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCA < 1:21814232/68‑1 CGCATTTGACCACTGCTTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCA < 1:9697765/68‑1 CGCATTTGACCACTGCTTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCA > 1:12305761/1‑68 CGCATTAGACCACTGCTTAAACAACCCGTGCTGCCGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCA < 1:1656484/68‑1 GCATTTGACCACTGCTTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCAG < 1:5925315/68‑1 GCATTTGACCACTGCTTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCA > 1:21125557/1‑67 GCATTTGACCACTGCTTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCA > 1:29534097/1‑67 GCATTTGACCACTGCTTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTCCGCGGGCA > 1:2440237/1‑67 ATTTGACCACTGCTTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCAGC < 1:35703067/67‑1 ATTTGACCACTGCTTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCAGC < 1:9105657/67‑1 ATTTCACCACTGCTTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCAGCA < 1:26076246/68‑1 tcACCACTGCTTAAACAACCCGGGCTGCTGCGCGCGCTGCCAGTTAGCAATCTGCGCGGGCAGCAGCA < 1:20894667/66‑1 cCCACTGCTTAAACAACCCGTGCTCCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCAGCAGCACG < 1:8656506/67‑1 CCACTCCTTAAACAACCCTTGCTCATGCTCGCGCTGCCAGTTAGCAATCTCCGCGGCCAGCAGCACGG < 1:35697957/68‑1 tcCTTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCAGCAGCACGGGTTG < 1:39091048/66‑1 gcCTTAAACAACCCGTCCTGCGGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCAGCAGCACGGGTTG < 1:35824893/66‑1 TGCTTAACCACCCCGTGCTGCTGCTCGCGCGGCCAGTTAGCAATCTGCGCGGGCAGCAGCACGGGTTG < 1:27551351/68‑1 TGCTTAAACACCCCGTGCTGCGGCCCGCGCTGCCAGTAAGCAATCTGCGCGGGCAGCAGCACGGGTTG < 1:2143857/68‑1 TGCTTAAACAACCCGCGCGCCGGCGCGCGCTGCCAGTAAGCAATCTGCGCGGGCAGCAGCACGGGTTG < 1:1721380/68‑1 TGCTAAAACACCCCGTGCTGCTGCTCGCGCTGCCAGTAAGCAAGCTGCGCGGGCAGCAGCACGGGTTG < 1:14172961/68‑1 TGCTAAAACACCCCGTCCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCAGCAGCACGGGTTG < 1:32481943/68‑1 TGCTAAAACAACCCGTGCTGCTGCGCGCGCTGCCAGTTAGCAATCTGCGCGGGCAGCAGCACGGGTTG < 1:15400888/68‑1 cCTTAAACACCCCGTGCGGCGGCGCGCGCGGCCAGTTAGCAAGCTGCGCGGGCAGCAGCACGGGTTGT < 1:30887460/67‑1 GCTTAAACACCCCGCGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCAGCAGCACGGGTTGT < 1:21903936/68‑1 CTTAAACACCCCGTGCGGCTGCGCGCGCTGCCAGTTAGCAATCTGCGCGGGCAGCAGCACGGGTTGTT < 1:12070137/68‑1 taAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTACCAATCTGCGCGGGCAGCAGCACGGGTTGTT < 1:36498244/65‑1 TTACACACCCCGGGCTGCGGCTCGCGCTGCCAGTTAGCAATCGGCGCGGGCAGCAGCACGGGTTGTT < 1:28743932/67‑1 TTAACCAACCCGTGCTGCTGCTCGCGCGGCCAGTTAGCAATCTGCGCGGGCAGCAGCACGGGTTGTT < 1:18228957/67‑1 TTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAAGCTGCGCGGGCAGCAGCACGGGTTGTT < 1:28492515/67‑1 CGTGCTGCTGCGCGCGCTGCCAGTTAGCAATCTGCGCGGGCAGCAGCACGGGTTGTTTAAGCAGTGGT < 1:38542396/68‑1 TGCTGCGCGCGCTGCCAGTTAGCAAACTGCGCGGGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAAT < 1:16864679/68‑1 GCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATC > 1:29435146/1‑68 GCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATC > 1:20605804/1‑68 AGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGT > 1:12433086/1‑68 AGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCG > 1:1848711/1‑67 AGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCG > 1:7341170/1‑67 AGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCG > 1:8508049/1‑67 tCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCTGTGGAGTTTCTACCTGAAATTAAACCGTATCGTC < 1:25295074/67‑1 GCAGCATGGCTTGTTTATGCTGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGT < 1:9252355/67‑1 ACCGCATTTGACCACTGCTTAAACAACCCGTGCTGCTGCTCGCGCTGCCAGTTAGCAATCTGCGCGGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1947835‑1947764‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTC > CP009273/1947802‑1947867 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |