| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1947764 = | 336 (0.710) | 19 (0.040) | 7/102 | NT | 5.5% | coding (66/972 nt) | cmoB | tRNA (cmo5U34)‑carboxymethyltransferase, carboxy‑SAM‑dependent |
| ? | CP009273 | 1947802 = | 352 (0.820) | coding (104/972 nt) | cmoB | tRNA (cmo5U34)‑carboxymethyltransferase, carboxy‑SAM‑dependent | |||||
Only 100 of 427 total aligned reads displayed.
GCATGATCGACTTTGGTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAAT > CP009273/1947697‑1947830 | acgatacggtttaatttcaggtagaaactccaccgcatttgaccactgcttaaacaacccgtgctgct > 1:12433086‑M1/66‑68 (MQ=255) cgatacggtttaatttcaggtagaaactccaccgcatttgaccactgcttaaacaacccgtgctgct > 1:1848711‑M1/65‑67 (MQ=255) aTCGACTTTGGTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGc > 1:11275197/1‑67 (MQ=255) aTCGACTTTGGTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGc > 1:37391885/1‑67 (MQ=255) aTCGACTTTGGTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGc > 1:36396570/1‑67 (MQ=255) aTCGACTTTGGTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGc > 1:28730268/1‑67 (MQ=255) aTCGACTTTGGTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGc > 1:20920811/1‑67 (MQ=255) aTCGACTTTGGTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGc > 1:20215701/1‑67 (MQ=255) tCGACTTTGGTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGccc < 1:21918647/68‑1 (MQ=255) cGACTTTGGTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGccc > 1:9609087/1‑67 (MQ=255) cGACTTTGGTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGccc > 1:5064576/1‑67 (MQ=255) cGACTTTGGTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGccc > 1:31560800/1‑67 (MQ=255) cGACTTTGGTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGccc > 1:23378478/1‑67 (MQ=255) aCTTTGGTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCcgc > 1:26556581/1‑67 (MQ=255) ggTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGAt < 1:35861982/68‑1 (MQ=255) ggTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGAt < 1:21457167/68‑1 (MQ=255) ggTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGAt < 1:20494299/68‑1 (MQ=255) ggTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGAt < 1:38923396/68‑1 (MQ=255) ggTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGAt < 1:3340528/68‑1 (MQ=255) ggTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGAt < 1:6908133/68‑1 (MQ=255) tAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGAtt > 1:35988926/1‑67 (MQ=255) tAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGAtt > 1:8421652/1‑67 (MQ=255) tAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGAtt < 1:4673501/67‑1 (MQ=255) tAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGAtt > 1:24663465/1‑67 (MQ=255) tAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGAtt > 1:21023873/1‑67 (MQ=255) tAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGAtt < 1:23892592/67‑1 (MQ=255) aCTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCt < 1:17282729/68‑1 (MQ=255) ttttATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTaa < 1:27208963/68‑1 (MQ=255) tttATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTa > 1:17730300/1‑66 (MQ=255) tttATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTa > 1:2897479/1‑66 (MQ=255) tttATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTCCCCGCGCAGATTGCTa > 1:20623744/1‑66 (MQ=255) ttgaTTCTCTGATTGCCAAAAATCATCTTGCACACTGGCTCGGAACGCTGCCCGCGCAGATTGCTAAc > 1:8680852/4‑68 (MQ=255) tctcTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCa > 1:4386851/1‑68 (MQ=255) gATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGcgcg > 1:10962434/1‑68 (MQ=255) ttGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGa < 1:38344277/67‑1 (MQ=255) gCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGagca < 1:5354864/68‑1 (MQ=255) cAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGagcagc < 1:18391257/68‑1 (MQ=255) cAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGagcagc < 1:18715572/68‑1 (MQ=255) atttgaccactgcttaaacaacccgtgctGCTGCCCGCGCAGTTTGCTAACTGGCAGCGCGcgcagca < 1:16864679‑M1/39‑1 (MQ=255) aaaTCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGagcagcagc < 1:9379382/68‑1 (MQ=255) aaaTCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGagcagcagc < 1:34389172/68‑1 (MQ=255) aaTCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAgcagcagca < 1:32216219/68‑1 (MQ=255) atcatcTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCAc > 1:27008271/1‑68 (MQ=255) atcatcTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCAc > 1:32060156/1‑68 (MQ=255) tcatcTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACg < 1:30174355/68‑1 (MQ=255) catcTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACgg < 1:21394245/68‑1 (MQ=255) atcTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACggg < 1:12965800/68‑1 (MQ=255) tttCACACTGGCTCGAACCGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttg < 1:15131564/68‑1 (MQ=255) tttCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttg < 1:14023069/68‑1 (MQ=255) tttCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttg < 1:25924322/68‑1 (MQ=255) tttCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttg < 1:22257642/68‑1 (MQ=255) tttCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttg < 1:31149839/68‑1 (MQ=255) tttCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttg < 1:22698347/68‑1 (MQ=255) tttCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttg < 1:21771576/68‑1 (MQ=255) tttCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttg < 1:18164847/68‑1 (MQ=255) tttCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttg < 1:6229441/68‑1 (MQ=255) tttCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttg < 1:28442246/68‑1 (MQ=255) tttCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttg < 1:24159641/68‑1 (MQ=255) ttCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttgt < 1:808872/68‑1 (MQ=255) ttCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttgt < 1:34858248/68‑1 (MQ=255) ttCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttgt > 1:1605541/1‑68 (MQ=255) tCACACTGGCTCGAAACGCTTCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttgtt < 1:22951265/68‑1 (MQ=255) tCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGTCAGCGCGAGCAGCAGCACGGgttgtt < 1:13638759/68‑1 (MQ=255) tCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttgtt < 1:36933221/68‑1 (MQ=255) tCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttgtt < 1:12795508/68‑1 (MQ=255) tCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttgtt < 1:3079622/68‑1 (MQ=255) tCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttgtt < 1:30527405/68‑1 (MQ=255) tCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttgtt < 1:29578628/68‑1 (MQ=255) tCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttgtt < 1:18048660/68‑1 (MQ=255) tCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttgtt < 1:19072159/68‑1 (MQ=255) tCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttgtt < 1:24806282/68‑1 (MQ=255) tCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttgtt < 1:35425682/68‑1 (MQ=255) cacTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTaa > 1:3930433/1‑68 (MQ=255) acTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTaa > 1:31874826/1‑67 (MQ=255) acTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTaa > 1:31019209/1‑67 (MQ=255) acTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTaa > 1:25073917/1‑67 (MQ=255) acTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTaa > 1:9110596/1‑67 (MQ=255) acTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTaa > 1:15484095/1‑67 (MQ=255) aacaacccgtgctGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGCGCAGCCGCACGGGGTGTTTAAg < 1:12070137‑M1/55‑1 (MQ=255) tGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCa < 1:33961153/68‑1 (MQ=255) caacccgtgctGCTGCCCGCGCAGATTGCTAACTGGCCGCGCGAGCAGCAGCACGGGGTGGTTAAGCa < 1:27551351‑M1/57‑1 (MQ=255) caacccgtgctGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGGACGGGGTGTTTTAGCa < 1:32481943‑M1/57‑1 (MQ=255) gCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGgttg < 1:16396132/58‑1 (MQ=255) cTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGt < 1:25580795/67‑1 (MQ=255) cTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGt < 1:3369785/67‑1 (MQ=255) cTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGt < 1:7765304/67‑1 (MQ=255) cTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGt < 1:35196165/67‑1 (MQ=255) tCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCGGTgg < 1:6510876/68‑1 (MQ=255) tCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTgg < 1:38798704/68‑1 (MQ=255) tCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTgg < 1:29725494/68‑1 (MQ=255) tCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTgg < 1:5895840/68‑1 (MQ=255) tCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTgg < 1:36604398/68‑1 (MQ=255) tCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTg < 1:18911314/67‑1 (MQ=255) tCGAAACGCTGCCCGCGCAGATTCCTAACTGGCAGCTCGAGCAGCAGCACGGGTTGTTTAAGCAGTgg < 1:4186322/68‑1 (MQ=255) aaCGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCaa > 1:10058466/1‑68 (MQ=255) aCGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCaaa > 1:7265973/1‑68 (MQ=255) cGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAAt > 1:11511845/1‑68 (MQ=255) cGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAAt > 1:37884285/1‑68 (MQ=255) cGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAAt > 1:14248287/1‑68 (MQ=255) GCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAAt < 1:35703067‑M1/67‑1 (MQ=255) | GCATGATCGACTTTGGTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAAT > CP009273/1947697‑1947830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |