| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2161385 | 567 (1.200) | 29 (0.080) | 10/90 | NT | 5.9% | intergenic (‑90/+85) | yegZ/yegR | pseudogene, gpD phage P2‑like protein D/uncharacterized protein |
| ? | CP009273 | = 2161396 | 475 (1.250) | intergenic (‑101/+74) | yegZ/yegR | pseudogene, gpD phage P2‑like protein D/uncharacterized protein | |||||
Only 100 of 203 total aligned reads displayed.
TTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2161308‑2161385‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcacgatgccGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTTACC < CP009273/2161396‑2161331 TTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGC < 1:21561698/68‑1 TATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCA < 1:34515277/68‑1 TATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGC > 1:35917945/1‑67 TATGCATAAGCCCTATCTCTGGTAACCGTCTTCCAATGACCACATCGATAGAATCCTCCTTCATAGC > 1:1761544/1‑67 GCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGA > 1:22858530/1‑68 GCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGA > 1:16070101/1‑68 GCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCATCCTTCATAGCACGA > 1:32853104/1‑68 ATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGAT > 1:2958740/1‑67 ATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGAT < 1:20068839/67‑1 ATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGAT < 1:30253119/67‑1 TAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGC < 1:19021496/68‑1 TAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGC < 1:17375019/68‑1 TAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGC < 1:32447908/68‑1 TAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGC < 1:4678498/68‑1 TAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGC < 1:31181027/68‑1 TAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGC < 1:15193961/68‑1 TAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGC < 1:5816951/68‑1 TAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGC < 1:30719346/68‑1 TAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGC < 1:12460409/68‑1 TAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGC < 1:30247329/68‑1 TAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGC < 1:27471645/68‑1 AAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCC < 1:24357862/68‑1 AAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCC < 1:22886199/68‑1 AAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCC < 1:31051424/68‑1 AAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCC < 1:29678292/68‑1 AAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCC < 1:9383397/68‑1 AAGCCCTATCTCTGGTAACCGTCTACCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCC < 1:16162683/68‑1 GTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCA > 1:6364485/1‑47 ATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCGATAAGTGAAAGGCATCGTGGTTTGAA > 1:10226654/1‑68 CCACATCGATAGAATCCTCCTTCATAGCACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGG > 1:15412731/1‑68 CCACATCGATAGAATCCTCCTTCATAGCACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGG > 1:3491762/1‑68 CCACATCGATAGAATCCTCCTTCATAGCACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGG > 1:25830972/1‑68 CCACATCGATAGAATCCTCCTTCATAGCACGATGCCGATAAGTGAAAGGAATCGTGCGATGAAGGAGG > 1:792418/1‑68 TCGATAGAATCCTCCTTCATAGCACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCT > 1:22462747/1‑68 GATAGAATCCTCCTTCATAGCACGACGCCGATAAGTGAAAGGCATGGTGCTATGAAGGCGGATTCTA > 1:6787919/1‑67 AGAATCCTCCTTCATAGCACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGA > 1:19172726/1‑68 AGAATCCTCCTTCATAGCACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGA > 1:15226454/1‑68 AGAATCCTCCTTCATAGCACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGA > 1:32059359/1‑68 AGAATCCTCCTTCATAGCACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGA > 1:21151750/1‑68 AGAATCCTCCTTCATAGCACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGA > 1:8360659/1‑68 AATCCTCCTTCATAGCACGATGGCGATAAGTGAAAGGCAGCGGGCGTTGAAGGAGGATTCTATCGATG > 1:20469998/1‑68 ATCCTCCTTCATAGCACGATGCCGATAAGTGAAAGGCATCGGGCTATGAAGGTGGATTCTATCGATGT > 1:25200877/1‑68 CCTCCTTCATAGCACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGG > 1:32412565/1‑68 CCTTCATAGCACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCA > 1:179948/1‑68 CATAGCACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGG > 1:24177610/1‑68 ATAGCACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGA > 1:16808572/1‑68 AGCACGATGCCGATAAGTGAAAGGCATCGTGCTATGTAGGAGGATTCTATCGATGTGGTCAATGGAAG > 1:10931723/1‑68 CACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGAC > 1:24203462/1‑68 CACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGAC > 1:5405296/1‑68 CACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGAC > 1:16184694/1‑68 CACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGAC > 1:16597586/1‑68 CACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGAC > 1:18271120/1‑68 CACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGAC > 1:35862085/1‑68 ACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACG > 1:7182179/1‑68 ACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACG > 1:38271947/1‑68 ACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACG > 1:30012425/1‑68 ACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACG > 1:25470702/1‑68 ACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACG > 1:19470081/1‑68 ACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACG > 1:11286375/1‑68 ACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACG > 1:14013391/1‑68 ACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACG > 1:18575578/1‑68 ACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACG > 1:17874863/1‑68 ACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACG > 1:24785879/1‑68 ACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACG < 1:24761806/68‑1 ACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACG > 1:21713112/1‑68 ACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACG > 1:18540408/1‑68 ACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGAC < 1:2650291/67‑1 ACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGAC < 1:33762074/67‑1 ACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGAC < 1:36513872/67‑1 ACGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATATGGTCAATGGAAGACG > 1:3179503/1‑68 CGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGG < 1:35589478/68‑1 CGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGG < 1:2917233/68‑1 CGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGG < 1:4471132/68‑1 CGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGG < 1:5815970/68‑1 CGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGG < 1:8508753/68‑1 CGATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGG < 1:1067174/68‑1 CGACGCCGATAAGTGAAACGCATCGTGCTATGACGGAGGATTCTATCGATGTGGTCAATGGAAGACGG < 1:7230001/68‑1 GATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGT < 1:25448630/68‑1 GATGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGT < 1:9740281/68‑1 ATGCCGATAAGTGAATGGCATCGTGCTATGAAGGACGATTCTATCGATGTGGTCAATGGAAGACGGgt > 1:368355/1‑66 TGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTT < 1:13806018/67‑1 TGCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTT < 1:36111891/67‑1 gaCGATTATTGAAATGCATCGTGCTATGAAGGAGGATTCTTTCGATGTGGTCAATGTAAGACGGTTAC < 1:18889979/66‑1 GCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTTAC < 1:25029686/68‑1 GCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTTAC < 1:38784674/68‑1 GCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTTAC < 1:39014837/68‑1 GCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTTAC < 1:23890249/68‑1 GCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTTAC < 1:27795116/68‑1 GCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTTAC < 1:2772892/68‑1 GCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTTAC < 1:10101294/68‑1 GCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTTAC < 1:25927384/68‑1 GCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTTAC < 1:19637111/68‑1 GCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTTAC < 1:13415863/68‑1 GCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTTAC < 1:11384965/68‑1 GCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTTA > 1:3325334/1‑67 GCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTTA > 1:1323718/1‑67 GCCGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTTA > 1:37903549/1‑67 GCCGATAAGTGAAAGGCATCCTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTTA > 1:15758246/1‑67 CGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTTACC < 1:26211735/67‑1 CGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTTACC < 1:14177962/67‑1 TTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2161308‑2161385‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcacgatgccGATAAGTGAAAGGCATCGTGCTATGAAGGAGGATTCTATCGATGTGGTCAATGGAAGACGGTTACC < CP009273/2161396‑2161331 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |