| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2161385 | 567 (1.200) | 29 (0.080) | 10/90 | NT | 5.9% | intergenic (‑90/+85) | yegZ/yegR | pseudogene, gpD phage P2‑like protein D/uncharacterized protein |
| ? | CP009273 | = 2161396 | 475 (1.250) | intergenic (‑101/+74) | yegZ/yegR | pseudogene, gpD phage P2‑like protein D/uncharacterized protein | |||||
Only 100 of 957 total aligned reads displayed.
AAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGAC > CP009273/2161318‑2161451 | aaGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCC < 1:9383397‑M1/68‑1 (MQ=255) aGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCt > 1:39079267/1‑68 (MQ=255) aGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCt > 1:37649835/1‑68 (MQ=255) aGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCt < 1:14232869/68‑1 (MQ=255) cccTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTTATAGCACGATGCCtt > 1:34499239/1‑67 (MQ=255) cccTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCtt > 1:782696/1‑67 (MQ=255) cccTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCtt > 1:33416143/1‑67 (MQ=255) cccTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCtt > 1:24195821/1‑67 (MQ=255) cccTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCtt > 1:13995793/1‑67 (MQ=255) ccTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCtt < 1:4794542/66‑1 (MQ=255) tctcTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACtt > 1:27487213/1‑68 (MQ=255) tctcTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACtt > 1:16960582/1‑68 (MQ=255) ctctGGTAACCGTCTTCCATTGACCACATGGATAGAATCCTCCTTCATAGCACAATGCCTTACACTTa > 1:8715084/1‑68 (MQ=255) ctctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTa > 1:5513459/1‑68 (MQ=255) ctctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTa < 1:6858891/68‑1 (MQ=255) ctctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTa < 1:10650989/68‑1 (MQ=255) ctctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTa < 1:32159129/68‑1 (MQ=255) tctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTa > 1:8457589/1‑67 (MQ=255) ggTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCg < 1:19727860‑M2/67‑2 (MQ=255) gTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggc < 1:71525‑M2/68‑4 (MQ=255) tAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCAGGATGCCTTTCACTTATCggc > 1:15758246‑M2/1‑64 (MQ=255) tAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggc > 1:37903549‑M2/1‑64 (MQ=255) cGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgt > 1:38271947‑M2/1‑60 (MQ=255) cGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgt > 1:18575578‑M2/1‑60 (MQ=255) gTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgtg > 1:166334‑M2/1‑59 (MQ=255) gTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgtg > 1:18271120‑M2/1‑59 (MQ=255) cTTCCATTGACCACATCGATAGAATCCTCCTACATAGCACGATGCCTTTCACTTATCggcatcgtgct > 1:10931723‑M2/1‑57 (MQ=255) tCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTcc < 1:26865463/68‑1 (MQ=255) aTTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCgataagtgaaaggcatcgtggtttgaa > 1:10226654‑M1/1‑41 (MQ=255) aTTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCcac > 1:23497906/1‑68 (MQ=255) aCCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:24891172/1‑68 (MQ=255) aCCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:13621225/1‑68 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCgataagtgaaaggcatcgtgctatgaaggagg > 1:3491762‑M1/1‑36 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:11596606/1‑67 (MQ=255) caTCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCg < 1:5166721/68‑1 (MQ=255) tAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACg < 1:8330522/68‑1 (MQ=255) tAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACg < 1:23905918/68‑1 (MQ=255) aGAATCCTCCTTCATAGCACGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcga > 1:15226454‑M1/1‑26 (MQ=255) aGAATCCTCCTTCATAGCACGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcga > 1:21151750‑M1/1‑26 (MQ=255) aGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGc > 1:1486484/1‑68 (MQ=255) aGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGc > 1:31640454/1‑68 (MQ=255) aGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGc > 1:19481229/1‑68 (MQ=255) aGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTACCACAGGTTCCGGCTACGc > 1:31812522/1‑68 (MQ=255) aTCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGcaca < 1:14517712/68‑1 (MQ=255) aTCCTCCTTCATAGCACGATGCCTGTCCCTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGcacc > 1:38923332/1‑67 (MQ=255) cctcctTCATAGCACGATGCCgataagtgaaaggcatcgtgctatgaaggaggtttctatcgatgtgg > 1:3316433‑M1/1‑21 (MQ=255) cctcctTCATAGCACGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtgg > 1:13246042‑M1/1‑21 (MQ=255) cctcctTCATAGCACGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtgg > 1:30096221‑M1/1‑21 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCggcatcgtgctatgaaggaggattctatcgatgtgg > 1:15412731‑M2/1‑32 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGcaccg > 1:5941026/1‑65 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAg > 1:17277920/1‑67 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAg > 1:17716061/1‑67 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAg > 1:28758321/1‑67 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAg > 1:1923769/1‑67 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGc < 1:22645265/68‑1 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGc < 1:20846034/68‑1 (MQ=255) cctTCATAGCACGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtca > 1:179948‑M1/1‑18 (MQ=255) cctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAg > 1:24451049/1‑68 (MQ=255) ttCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGaa < 1:11323489/68‑1 (MQ=255) tCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAAc > 1:18942081/1‑68 (MQ=255) aTAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAAcgc > 1:36867443/1‑68 (MQ=255) aTAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAAcgc > 1:21574256/1‑68 (MQ=255) tAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAAcgcg < 1:26484660/68‑1 (MQ=255) tAGCACGAGGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAAcgcg < 1:32602409/68‑1 (MQ=255) aGCACGATGCCgattagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaag > 1:25465967‑M1/1‑11 (MQ=255) aGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACgcgc > 1:22136859/1‑68 (MQ=255) aGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACgcgc > 1:37430225/1‑68 (MQ=255) cACGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagac > 1:16184694‑M1/1‑9 (MQ=255) aCGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacg > 1:3087328‑M1/1‑8 (MQ=255) aCGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagac < 1:36513872‑M1/67‑60 (MQ=255) aCGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagac < 1:20257208‑M1/67‑60 (MQ=255) aCGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata > 1:29841536/1‑68 (MQ=255) aCGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata < 1:11792664/68‑1 (MQ=255) aCGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata > 1:6407977/1‑68 (MQ=255) aCGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata > 1:29153155/1‑68 (MQ=255) aCGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata > 1:247611/1‑68 (MQ=255) aCGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata > 1:3239496/1‑68 (MQ=255) aCGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata < 1:38517652/68‑1 (MQ=255) aCGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata > 1:15967563/1‑68 (MQ=255) aCGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata > 1:25957866/1‑68 (MQ=255) aCGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCat < 1:21735781/67‑1 (MQ=255) aCGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCat < 1:28306970/67‑1 (MQ=255) cGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacgg < 1:35589478‑M1/68‑62 (MQ=255) cGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacgg < 1:25122336‑M1/68‑62 (MQ=255) cGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacgg < 1:4471132‑M1/68‑62 (MQ=255) cGATGCCTTTCACTTATCGGCATTGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCatat > 1:3392713/1‑68 (MQ=255) cGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCatat < 1:20447175/68‑1 (MQ=255) cGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCatat < 1:35338940/68‑1 (MQ=255) gATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacggt < 1:9740281‑M1/68‑63 (MQ=255) gATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacggt < 1:25772266‑M1/68‑63 (MQ=255) tGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacggtt < 1:36111891‑M1/67‑64 (MQ=255) tGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacggtt < 1:35867464‑M1/67‑64 (MQ=255) gCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacggttac < 1:10101294‑M1/68‑66 (MQ=255) gCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacggttac < 1:2772892‑M1/68‑66 (MQ=255) gCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacggttac < 1:12793072‑M1/68‑66 (MQ=255) gCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTg > 1:7266295/1‑67 (MQ=255) gCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTg > 1:29338783/1‑67 (MQ=255) gCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCAGGCTACGCACAGCCAGAACGCGCATATTTg > 1:30555513/1‑67 (MQ=255) gCCTTTCACTTATCGGCATCGTGCTACCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTg > 1:23014119/1‑67 (MQ=255) ccTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGAc > 1:12103547/1‑68 (MQ=255) | AAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGAC > CP009273/2161318‑2161451 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |