BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2542953 =	565 (1.200)	24 (0.060)	10/98	NT	5.0%	intergenic (+188/+52)	yfeW/yfeX	penicillin binding protein PBP4B; weak DD‑carboxypeptidase activity/porphyrinogen oxidase, cytoplasmic
*	?	CP009273	2542983 =	413 (1.000)	24 (0.060)	10/98	NT	5.0%	intergenic (+218/+22)	yfeW/yfeX	penicillin binding protein PBP4B; weak DD‑carboxypeptidase activity/porphyrinogen oxidase, cytoplasmic

Only 100 of 141 total aligned reads displayed.

GACAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/2543025‑2542953

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcctTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATAATAG  >  CP009273/2542983‑2543047

GACAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACa                                                                        >  1:30914107/1‑67

 ACAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTG                                                                       >  1:22676748/1‑68

 ACAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTG                                                                       >  1:22953625/1‑68

 ACAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTG                                                                       >  1:22975568/1‑68

 ACAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTG                                                                       >  1:21738310/1‑68

 ACAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTG                                                                       >  1:6270408/1‑68

 ACAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTG                                                                       >  1:23150093/1‑68

 ACAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTG                                                                       >  1:5042940/1‑68

 ACAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTG                                                                       >  1:23546801/1‑68

 ACAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTG                                                                       >  1:2075828/1‑68

 ACAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTG                                                                       >  1:18139113/1‑68

 ACAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTG                                                                       >  1:34912607/1‑68

 ACAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTG                                                                       >  1:36326217/1‑68

  CAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGG                                                                      <  1:3224971/68‑1

  CAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGG                                                                      <  1:34646982/68‑1

  CAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGG                                                                      <  1:35500936/68‑1

  CAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGG                                                                      <  1:28298651/68‑1

  CAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGG                                                                      <  1:37104202/68‑1

  CAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTG                                                                       <  1:28792450/67‑1

  CAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTG                                                                       >  1:27851436/1‑67

   tAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:13778674/67‑1

   AAGTTTATGGAGCTGTAAGCGTTTCTGATTCATTGATTAATGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:18624555/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTTAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:9425082/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:32674812/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:31261621/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:32882256/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:34386224/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:36912299/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:37142498/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:27497266/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:38709043/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:4060086/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:5374537/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:6559122/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:7373528/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:8128761/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:10495020/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:15724594/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:17400325/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:22179060/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:10885491/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:18226399/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:2089432/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:18556880/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:13670642/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:19200570/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:1921666/68‑1

   AAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:11924048/68‑1

   AAGTTGATGGCGCGGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:29748116/68‑1

   AAGTTGATGGCGCGGTAAGCGTTTCTGATTCATTCATTAAAGGCCCGGCAGTAACATTACTGACTGGC                                                                     <  1:19605443/68‑1

   AAGGTGATGGCGCGGTAAGCGTATCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:34140439/68‑1

    AGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGCC                                                                    <  1:38462399/68‑1

    AGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGG                                                                      >  1:11098549/1‑66

    AGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGG                                                                      >  1:12507981/1‑66

       TGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGCCT                                                                   <  1:15415411/66‑1

       TGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGCCT                                                                   <  1:7951659/66‑1

       TGATGGCGCGGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGCCT                                                                   <  1:27517962/66‑1

                 GTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGCCTTTAATCAATGAA                                                       <  1:32810756/68‑1

                 GTAAGCGCTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGCCTTTAATCAATGAA                                                       <  1:30740793/68‑1

                  TAAGCGTTTCTGAATCATTGATTACAGGCCACGCAGTAACATTACTGACTGGCCTTTAATCAATGAA                                                       <  1:38497709/67‑1

                   AAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGCCTTTAATCAATGAAT                                                      <  1:7106261/67‑1

                       GTTTCTGATTCATTTATTAAAGCCCAGGCAGTAACATTACTGACTGGCCTTTAATCAATGAATCAGA                                                  <  1:6822275/67‑1

                         TTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGCCTTTAATCAATGAATCAGAAA                                                <  1:12283943/67‑1

                         TTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGCCTTTAATCAATGAATCAGAAA                                                <  1:12391211/67‑1

                          cCTGATTCATTGATTAAAGGCCAGGCAGAAACATTACTCACTGGCCTTTAATCAATGAATCAGAAACG                                              <  1:8201310/67‑1

                          TCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGCCTTTAATCAATGAATCAGAAACG                                              <  1:2264526/68‑1

                          TCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGCCTTTAATCAATGAATCAGAAACG                                              <  1:16137996/68‑1

                          TCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGCCTTTAATCAATGAATCAGAAACG                                              <  1:21578978/68‑1

                          TCTGATTCATTGATTAAAGCCCAGGCAGTAACATTACTGACTGGCCTTTAATCAATGAATCAGAAACG                                              <  1:31830095/68‑1

                          TCTGATTCAATGATTAAAGGCCAGGCAGTAACATTACTGACTGGCCTTTAATCAATGAATCAGAAACG                                              <  1:13364751/68‑1

                                TCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGC                                                                     <  1:17545923/39‑1

                                     GATTAAAGGCCAGGCAGTAACATTACTGACTGGCCTTTAATCAATTAATCAGAAACGCTTACAGCGCC                                   <  1:27076698/68‑1

                                       TTAAAGGCCAGGCAGTAACATTACTGACTGGCCTTTAATCAATGAATCAGAAACGCTTACAGCGCCAT                                 <  1:29241816/68‑1

                                                        atgTTACTGACTGGCCTTTAATCAATGAATCAGAAACGCTTACAGCGCGATCAACTTGTCCAGCGACG                >  1:38649568/4‑68

                                                            TACTGACTGGCCTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGC            >  1:17785394/1‑68

                                                               TGACTGGCCTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAA         <  1:8995238/68‑1

                                                               TGACTGGCCTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAA         >  1:32000914/1‑68

                                                                  CTGGCCTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATA      <  1:35435838/68‑1

                                                                  CTGGCCTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATA      >  1:9268929/1‑68

                                                                  CTGGCCTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATA      >  1:34729049/1‑68

                                                                  CTGGCCTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAAT       <  1:10348150/67‑1

                                                                  CTGGCCTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAAT       <  1:37883439/67‑1

                                                                  CTGGCCGTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATA      >  1:7939755/1‑68

                                                                     GCCTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATAATA   >  1:31226748/1‑68

                                                                     GCCTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATAATA   >  1:22285604/1‑68

                                                                      CCTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATAATA   >  1:22520148/1‑67

                                                                      CCTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATAATA   >  1:14460681/1‑67

                                                                      CCTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATAATA   >  1:24747316/1‑67

                                                                      CCTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATAATA   >  1:24789931/1‑67

                                                                       CTTTAATCAATGAATCAGAAACGCTTACCGCGCCATCAACTTGTCCAGCGACGGTGCGAAATAATAG  >  1:14902125/1‑67

                                                                       CTTTAATCAATGAATCAGAAACGCTTACCGCGCCATCAACTTGTCCAGCGACGGTGCGAAATAATAG  >  1:19621786/1‑67

                                                                       CTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATAATAG  >  1:36821731/1‑67

                                                                       CTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATAATAG  >  1:37932373/1‑67

                                                                       CTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATAATAG  >  1:219041/1‑67

                                                                       CTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATAATAG  >  1:25284347/1‑67

                                                                       CTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATAATAG  <  1:27320728/67‑1

                                                                       CTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATAATAG  >  1:2040180/1‑67

                                                                       CTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATAATAG  >  1:2820013/1‑67

                                                                       CTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATAATAG  >  1:18970791/1‑67

                                                                       CTTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATAATAG  >  1:17791941/1‑67

GACAAGTTGATGGCGCTGTAAGCGTTTCTGATTCATTGATTAAAGGCCAGGCAGTAACATTACTGACTGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/2543025‑2542953

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcctTTAATCAATGAATCAGAAACGCTTACAGCGCCATCAACTTGTCCAGCGACGGTGCGAAATAATAG  >  CP009273/2542983‑2543047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.