| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2955919 | 281 (0.600) | 16 (0.040) | 5/96 | NT | 6.0% | coding (205/324 nt) | ppdC | putative prepilin peptidase‑dependent protein |
| ? | CP009273 | = 2955921 | 260 (0.640) | coding (203/324 nt) | ppdC | putative prepilin peptidase‑dependent protein | |||||
GCCCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGACCTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2955845‑2955919‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgccaACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAGTTTC < CP009273/2955921‑2955855 GCCCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGA < 1:7850218/68‑1GCCCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGA < 1:5166041/68‑1 CCCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGA > 1:17717142/1‑67 CCCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGA > 1:14385147/1‑67 CCCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGA > 1:1533463/1‑67 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGCCACATCCCGCCTGCGATGTCTGCATTCGGTTGA > 1:22856910/1‑66 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCGTTCGGTTGA > 1:13133379/1‑66 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGACC < 1:27727619/68‑1 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGACC < 1:36329675/68‑1 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGACC < 1:15009365/68‑1 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGAC < 1:10417542/67‑1 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGAC < 1:2579486/67‑1 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGAC < 1:2644565/67‑1 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGAC < 1:3025536/67‑1 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGAC < 1:33477889/67‑1 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGAC < 1:14730415/67‑1 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGAC < 1:37703226/67‑1 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGA > 1:15480757/1‑66 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGA > 1:37581451/1‑66 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGA > 1:26615605/1‑66 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGA > 1:13604363/1‑66 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGA > 1:25864043/1‑66 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGA > 1:9129973/1‑66 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGA > 1:25178499/1‑66 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGA > 1:23049966/1‑66 CCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGA > 1:22176280/1‑66 CCCGGGTGAAACTAGCGTACCGCTGATGCTGACACATCCCGCCTGCGCTGTCTGCATTCGGTTGA > 1:14458552/1‑65 CCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGA > 1:34317840/1‑65 CCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGA > 1:22858957/1‑65 CCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGA > 1:9946716/1‑65 CCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGA > 1:21686379/1‑65 CCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGA > 1:15763948/1‑65 CGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGACCTGC < 1:446529/68‑1 CGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGACCTGC < 1:8771059/68‑1 GGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGACCTGCCA > 1:2380471/1‑68 GGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGGCTGCATTCGGTTGACCTGCCA > 1:25237967/1‑68 GTGAAACTAGCGTAACGCTGATGCCGACACATCCCGCCTGCGATGTCTGCATTCGGTTGACCTGCCA < 1:8778472/67‑1 TGTCTGCATTCGGTTGACCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGTTGTGTC > 1:14060035/1‑68 TCTGCATTCGGTTGACCTGCCAACTGGCAGGTCAACCGAATGCAGCCATCGCAGGCGGGATGTGTCA > 1:37663392/1‑67 CTGCATTCGGTTGACCTGCCAACTGGCAGGTCAACCGCATGCAGACATCGCAGGCGGGATGTGTCAGC > 1:31091481/1‑68 CTGCATTCGGTTGACCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGC > 1:30687027/1‑68 CTGCATTCGGTTGACCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGC > 1:35121970/1‑68 CTGCATTCGGTTGACCTGCCAACGGGCAGGTCAGCCGCATGCAGACATCGCAGGCGGGGTGTGTCAGC > 1:2400701/1‑68 CATTCGGTTGACCTGCCAACTGGCAGGTCCACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCCTC > 1:18526282/1‑68 TTCGGTTGACCTGCCAACTGGCAGGTCACCCGAATGCAGCCATCGCAGGCGGGATGTGTCAGCATCA > 1:30032200/1‑67 TTCGGTTGACCTGCCAACTGGCAGGTCAACCGAATGCAGCCATCGCAGGCGGGATGTGTCAGCATCA > 1:8545313/1‑67 TTCGGTTGACCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGTTGTGTCAGCATCA > 1:9327743/1‑67 TTCGGTTGACCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGTTGTGTCAGCATCA > 1:7798545/1‑67 TTCGGTTGACCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGGTGTGTCAGCATCA > 1:14389564/1‑67 TTCGGTTGACCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCA > 1:5286936/1‑67 TTCGGTTGACCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCA > 1:7842996/1‑67 TTCGGTTGACCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCA > 1:11038464/1‑67 TTCGGTTGACCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCA > 1:14554897/1‑67 GTTGACCTGCCAACTGGCAGGTCATCCGAATGCAGCCATCGCTGGCGGGATGTGTCAGCATCAGCGTT > 1:22091658/1‑68 GTTGACCTGCCAACTGGCAGGTCAACCGAATGCAGACCTCGCAGGCGGGATGTGTCAGCATCAGCGTT > 1:26447158/1‑68 GTTGACCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTT > 1:20598581/1‑68 GTTGACCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTT > 1:12447488/1‑68 GTTGACCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTT > 1:32842979/1‑68 GTTGACCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTT > 1:29017403/1‑68 ACCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTAC > 1:17260618/1‑66 CCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCT > 1:26985669/1‑68 CCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCT > 1:38127528/1‑68 CCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCT > 1:14876787/1‑68 TGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAG > 1:14379899/1‑68 TGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAG < 1:220347/68‑1 TGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAG < 1:31179992/68‑1 TGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAG < 1:26224944/68‑1 TGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAG < 1:34814623/68‑1 TGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAG < 1:15120242/68‑1 TGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAG < 1:36062917/68‑1 TGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAG < 1:5309026/68‑1 TGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAG < 1:2888186/68‑1 TGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAG > 1:36643128/1‑68 TGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAG > 1:14180222/1‑68 TGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAG < 1:37211161/68‑1 TGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACACTAG < 1:689319/68‑1 TGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCACCAGCGTTACGCTAG < 1:7072001/68‑1 TGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGGCAGCATCAGCGTTACGCTAG < 1:6403637/68‑1 GCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAGT < 1:19245263/68‑1 CAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAGTT > 1:16452616/1‑67 CAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAGTT < 1:29980308/67‑1 CAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAGTT < 1:12162752/67‑1 CAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAGTT > 1:37174125/1‑67 CAACTGGCAGGTCAACCGAATGAAGACATCGCAGGCGGGATGAGTCAGCATCAGCGTTACGCTAGTT > 1:7181952/1‑67 AACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAGTTTC > 1:411512/1‑68 GCCCCCGGGTGAAACTAGCGTAACGCTGATGCTGACACATCCCGCCTGCGATGTCTGCATTCGGTTGACCTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2955845‑2955919‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgccaACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAGTTTC < CP009273/2955921‑2955855 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |