| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3113142 = | 363 (0.770) | 14 (0.030) | 7/98 | NT | 5.0% | coding (1497/1683 nt) | glcA | glycolate transporter |
| ? | CP009273 | 3113164 = | 212 (0.510) | coding (1475/1683 nt) | glcA | glycolate transporter | |||||
Only 100 of 162 total aligned reads displayed.
TTGGTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3113215‑3113142‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccagcAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCGTTAGAG > CP009273/3113164‑3113229 TTGGTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAAC > 1:24264065/1‑68TTGGTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAAC > 1:28538080/1‑68TTGGTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAAC > 1:19106650/1‑68TTGGTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAAC > 1:30343788/1‑68TTGGTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAAC > 1:32820799/1‑68TTGGTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAAC > 1:38887129/1‑68TTGGTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAAC > 1:2250424/1‑68 TGGTTCACTGCAATCGACCACGGCGCAGCAGATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACA < 1:8106477/68‑1 TGGTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACA < 1:28364256/68‑1 TGGTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACA < 1:31720847/68‑1 TGGTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACA < 1:35825830/68‑1 TGGTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACA < 1:4538850/68‑1 GGTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACA > 1:19885189/1‑67 GTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACC > 1:33081839/1‑68 GTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACC > 1:32361631/1‑68 GTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACC > 1:29518946/1‑68 GTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACC > 1:9327451/1‑68 GTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACAC > 1:22066780/1‑67 TTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACC < 1:15682466/67‑1 TCACTGCAATCGACCACGGCGCAGCAAATCGACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:8627488/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACAaaa > 1:35185227/1‑64 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:2607072/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:27626781/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:24952162/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:24388249/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:27882529/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:321695/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:29071373/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:29944605/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:32067574/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:10269857/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:34688923/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:35844776/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:37028026/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:6558025/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA < 1:6761660/67‑1 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:9547223/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:13987294/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:10231860/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:12724414/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:14354082/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:14708902/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:18654319/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:18965698/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:23276445/1‑67 TCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:21946307/1‑67 TCACTGCAATCGACAACGGCGCAGCAAATCAACGTATCTGACACCCTGCTGGTGGCAGCAAACACCA > 1:17192953/1‑67 TGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCAGCAGG < 1:15206483/68‑1 AATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCAGCAGGGT < 1:11258136/67‑1 AATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCAGCAGGGT < 1:14122390/67‑1 AATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCAGCAGGGT < 1:32983749/67‑1 ACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCAGCAGGGTGTCAGAGAC < 1:30280388/68‑1 ACGGCGCAGCAAATCAACGTCTCTGACACCCTCCTGGTGGCAGCAAACACCAGCAGGGTGTCAGAGAC < 1:7277057/68‑1 CGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCAGCAGGGTGTCAGAGACG < 1:12724773/68‑1 AAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCAGCAGGGTGTCAGAGACGTTGATTT < 1:1206957/66‑1 GTCTCTGACACCCTGCTGGTGGCAGCAAACACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGT < 1:6955810/68‑1 TCTGCCACCCGGCGGGTGGCAGCAAACACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGT < 1:13932207/68‑1 ACACCCTGCGGGTGGCAGCAAACACCCGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGAT < 1:19852802/68‑1 CACCCTGCTGGGGGCAGCAAACACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGAT < 1:27413092/67‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAATCAGGGCG < 1:9411443/67‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCGT < 1:6148710/68‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCGT < 1:4382053/68‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCG < 1:17416791/67‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCG < 1:27772296/67‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCG < 1:10901813/67‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCG < 1:8392853/67‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCG < 1:20720237/67‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCG < 1:185104/67‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCG < 1:18488362/67‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCG < 1:5822964/67‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCG < 1:4733723/67‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCG < 1:29842741/67‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCG < 1:38258672/67‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCG < 1:38214372/67‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCG < 1:12974368/67‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCG < 1:1765565/67‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCG < 1:31228728/67‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCG < 1:33641104/67‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCG < 1:34022909/67‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCG < 1:34561795/67‑1 CACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGCCG < 1:8678053/67‑1 CACCAGCAGGGTGTCAGAGACGTTGAATTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCG < 1:36717688/67‑1 ACCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCGTT < 1:16802853/68‑1 CCAGCAGGGTGTCAGAGACGTTGATTTGCTGCTCCGTGGTCGATTGCAGTGAACCAAACAGGGCGTTA < 1:18167352/68‑1 CCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCGTTA < 1:37296789/68‑1 CCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCGTTA < 1:10354850/68‑1 CCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCGTTA < 1:33967328/68‑1 CCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCGTTA < 1:7861509/68‑1 CCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCGTTA < 1:25408691/68‑1 CCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCGTTA < 1:6040744/68‑1 CCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCGTTA < 1:5426256/68‑1 CCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCGTTA < 1:22824934/68‑1 CCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCGTTA < 1:36359638/68‑1 CCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCGTTA < 1:4039601/68‑1 CCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCGTTA < 1:36725919/68‑1 CCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCGTTA < 1:36964155/68‑1 CCAGCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGAAGTGAACCAAAAAGGGCGGTA > 1:18168013/1‑68 GCAGGGTGTCAGAGACGTTGATTTGCTGCTCCGTGGTCGATTGCAGTGAACCAAACAGGGCGTTAGAG > 1:1218722/1‑68 GCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCGTTAGAG > 1:6971834/1‑68 GCAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCGTTAGAG > 1:23838537/1‑68 TTGGTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3113215‑3113142‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccagcAGGGTGTCAGAGACGTTGATTTGCTGCGCCGTGGTCGATTGCAGTGAACCAAACAGGGCGTTAGAG > CP009273/3113164‑3113229 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |