BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3333655	319 (0.680)	18 (0.050)	11/94	NT	5.5%	coding (22/978 nt)	yrbG	putative calcium/sodium:proton antiporter
*	?	CP009273	= 3333682	353 (0.890)	18 (0.050)	11/94	NT	5.5%	coding (49/978 nt)	yrbG	putative calcium/sodium:proton antiporter

Only 100 of 271 total aligned reads displayed.

GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3333580‑3333655

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcactgtAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCTTCA  <  CP009273/3333682‑3333617

GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTAC                                                                            >  1:4905154/1‑68

GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTAC                                                                            >  1:33605251/1‑68

GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTAC                                                                            >  1:21030928/1‑68

GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTAC                                                                            >  1:14020423/1‑68

GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTAC                                                                            >  1:738868/1‑68

GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGATAGATGCTTTTAGCTAC                                                                            >  1:1522262/1‑68

 CTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACG                                                                           >  1:28253269/1‑68

 CTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACG                                                                           >  1:4064186/1‑68

 CTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTAC                                                                            <  1:37450147/67‑1

  TTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACG                                                                           >  1:32898748/1‑67

  TTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACG                                                                           >  1:25199697/1‑67

   TTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC                                                                         <  1:27814182/68‑1

   TTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC                                                                         <  1:18182403/68‑1

   TTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC                                                                         <  1:19129970/68‑1

   TTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC                                                                         <  1:19782350/68‑1

   TTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC                                                                         <  1:686840/68‑1

   TTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC                                                                         <  1:37213701/68‑1

   TTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC                                                                         <  1:30536377/68‑1

   TTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC                                                                         <  1:31004343/68‑1

   TTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC                                                                         <  1:34055985/68‑1

   TTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGC                                                                         <  1:35050603/68‑1

     CTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGATAGGACGTTAGATGCTTTTAGCTACGGCAC                                                                       <  1:4429682/68‑1

      TGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACT                                                                      <  1:10030099/68‑1

      TGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACT                                                                      <  1:29082154/68‑1

       GAAAATCTTCAGCGGACTGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG                                                                     <  1:15768533/68‑1

       GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG                                                                     <  1:3573010/68‑1

       GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG                                                                     <  1:13669378/68‑1

       GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG                                                                     <  1:12542669/68‑1

       GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG                                                                     <  1:16408568/68‑1

       GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG                                                                     <  1:11580164/68‑1

       GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG                                                                     <  1:2152315/68‑1

       GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG                                                                     <  1:32166835/68‑1

       GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG                                                                     <  1:20763130/68‑1

       GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG                                                                     <  1:9353930/68‑1

       GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG                                                                     <  1:34628490/68‑1

       GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG                                                                     <  1:35326570/68‑1

       GAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTG                                                                     <  1:35527699/68‑1

         AAATCTTCAGCTTAGCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT                                                                    <  1:2704223/67‑1

         AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT                                                                    <  1:10826478/67‑1

         AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT                                                                    <  1:36226832/67‑1

         AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT                                                                    <  1:29853742/67‑1

         AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT                                                                    <  1:12464029/67‑1

         AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT                                                                    <  1:12945290/67‑1

         AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT                                                                    <  1:18752494/67‑1

         AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT                                                                    <  1:14546713/67‑1

         AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT                                                                    <  1:27466417/67‑1

         AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT                                                                    <  1:18882131/67‑1

         AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT                                                                    <  1:4689826/67‑1

         AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT                                                                    <  1:22543770/67‑1

         AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT                                                                    <  1:22910775/67‑1

         AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT                                                                    <  1:24053216/67‑1

         AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT                                                                    <  1:5773006/67‑1

         AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT                                                                    <  1:24339050/67‑1

         AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT                                                                    <  1:24858350/67‑1

         AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT                                                                    <  1:19348097/67‑1

         AAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT                                                                    <  1:38289995/67‑1

                                             GGACGTTAGATGCTTTTAGCTACGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGT                               >  1:17166546/1‑68

                                                    AGATGCTTTTAGCTACGGCACTGTATACGACCATAAGTAAACCAACAATTAACAGTGCCGTAGCTAAA                        >  1:6179821/1‑68

                                                       TGCTTTTAGCTACGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGC                     >  1:1217647/1‑68

                                                               GCTACGGCACTGTAAACGACCAAAAGTAACCCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACG             >  1:9124343/1‑68

                                                               GCTACGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACG             >  1:21239079/1‑68

                                                                CTACGGCACTGTAAACGACCAAAAGTAAACCAACAATTCACAGTGCCGTAGCTAAAAGCATCTAACG             >  1:8217836/1‑67

                                                                   CGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAATAGCATCTAACGTCC          <  1:31406188/67‑1

                                                                   CGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCC          <  1:26370890/67‑1

                                                                   CGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCC          <  1:21621864/67‑1

                                                                   CGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCC          <  1:38791662/67‑1

                                                                   CGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCC          <  1:26644924/67‑1

                                                                   CGGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCC          <  1:26210930/67‑1

                                                                    GGCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTT        <  1:17742404/68‑1

                                                                     GCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTT        >  1:30284076/1‑67

                                                                     GCACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTT        >  1:37758660/1‑67

                                                                      CACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTT       <  1:37018374/67‑1

                                                                      CACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTT       <  1:10127418/67‑1

                                                                      CACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTT       <  1:15433378/67‑1

                                                                      CACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTT       <  1:16128476/67‑1

                                                                      CACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTT       <  1:22038026/67‑1

                                                                      CACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTT       <  1:18610122/67‑1

                                                                      CACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTT       <  1:35006042/67‑1

                                                                      CACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTT        >  1:17043615/1‑66

                                                                       ACTGTAAACGACCAAAAGTAATCCAACAATTAACAGTGCCGTAGCTAAAAGCAGCTAACGTCCTTTCT     >  1:7982771/1‑68

                                                                       ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT     <  1:4784894/68‑1

                                                                       ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT     >  1:1048900/1‑68

                                                                       ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT     <  1:11154502/68‑1

                                                                       ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT     >  1:15017852/1‑68

                                                                       ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT     <  1:7963011/68‑1

                                                                       ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT     <  1:6456459/68‑1

                                                                       ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT     >  1:16635660/1‑68

                                                                       ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT     <  1:2361134/68‑1

                                                                       ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT     <  1:39013403/68‑1

                                                                       ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT     <  1:25683592/68‑1

                                                                       ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT     <  1:38049366/68‑1

                                                                       ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT     <  1:27202902/68‑1

                                                                       ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT     >  1:28819037/1‑68

                                                                       ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT     <  1:31781126/68‑1

                                                                       ACTGTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCT     <  1:36561314/68‑1

                                                                          GTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCTTCA  <  1:20199689/68‑1

                                                                          GTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCTTCA  <  1:24250262/68‑1

                                                                          GTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCTTCA  <  1:28637137/68‑1

                                                                          GTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCTTCA  <  1:8270597/68‑1

                                                                          GTAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCTTCA  <  1:8839254/68‑1

GCTTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3333580‑3333655

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcactgtAAACGACCAAAAGTAAACCAACAATTAACAGTGCCGTAGCTAAAAGCATCTAACGTCCTTTCTTCA  <  CP009273/3333682‑3333617

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.