New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 3333655319 (0.680)18 (0.050) 11/94 NT 5.5% coding (22/978 nt) yrbG putative calcium/sodium:proton antiporter
?CP009273 = 3333682 353 (0.890)coding (49/978 nt) yrbG putative calcium/sodium:proton antiporter

Only 100 of 537 total aligned reads displayed.

CCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGAT  >  CP009273/3333615‑3333749
                                                                   |                                                                   
cccgaagaaAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGttt                                                                     >  1:11144581/4‑68 (MQ=255)
ccTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGttt                                                                     >  1:9376569/1‑68 (MQ=255)
ccTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGttt                                                                     <  1:18850840/68‑1 (MQ=255)
ccTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGttt                                                                     >  1:37492135/1‑68 (MQ=255)
ccTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGttt                                                                     <  1:6051215/68‑1 (MQ=255)
  tGAAGAAAGGACGTTAGATGCTTTTATCTACGGCTCTGTTAATTGTTGGTTTTCTTTTGGTCGTTTac                                                                   >  1:16168959‑M2/1‑66 (MQ=255)
  tGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTac                                                                   <  1:26335773‑M2/68‑3 (MQ=255)
  tGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTac                                                                   <  1:28637137‑M2/68‑3 (MQ=255)
  tGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTac                                                                   <  1:8270597‑M2/68‑3 (MQ=255)
     agaaAGGACGTTAGCTGCTTTTAGCTACGGCACTGTTAATTGTTGGATTACTTTTGGTCGTTTacagt                                                                >  1:7982771‑M2/1‑63 (MQ=255)
     agaaAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagt                                                                <  1:34039806‑M2/68‑6 (MQ=255)
     agaaAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagt                                                                >  1:18727693‑M2/1‑63 (MQ=255)
     agaaAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagt                                                                <  1:2361134‑M2/68‑6 (MQ=255)
     agaaAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagt                                                                <  1:27202902‑M2/68‑6 (MQ=255)
     agaaAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGATTACTTTTGGTCGTTTacagt                                                                >  1:36585428‑M2/1‑63 (MQ=255)
       aaaGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagtg                                                               <  1:35531622‑M2/67‑7 (MQ=255)
       aaaGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagtg                                                               <  1:30390587‑M2/67‑7 (MQ=255)
        aaGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagtgcc                                                             <  1:17742404‑M2/68‑9 (MQ=255)
        aaGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagtgc                                                              >  1:37758660‑M2/1‑60 (MQ=255)
        aaGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagtgc                                                              >  1:31941175‑M2/1‑60 (MQ=255)
        aaGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagtg                                                               >  1:17043615‑M2/1‑60 (MQ=255)
          ggACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagtgccg                                                            <  1:12511607‑M2/67‑10 (MQ=255)
            aCGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGAcc                                                         >  1:8614529/1‑68 (MQ=255)
             cGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagtgccgtag                                                         >  1:24715522‑M2/1‑55 (MQ=255)
             cGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGAcc                                                         >  1:29717009/1‑67 (MQ=255)
              gTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGc                                                       <  1:27044357/68‑1 (MQ=255)
              gTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGc                                                       <  1:30055045/68‑1 (MQ=255)
                tAGATGCTTTTTGCTACGGCACTGTTAATTGTTTGTTTACTTTTGGTCGTTTACAGTGCCGACCGcc                                                      <  1:14394664/67‑1 (MQ=255)
                 aGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTg                                                    >  1:3301116/1‑68 (MQ=255)
                 aGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTg                                                    >  1:12713704/1‑68 (MQ=255)
                 aGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTg                                                    >  1:18546270/1‑68 (MQ=255)
                   aTGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGt                                                  >  1:30800604/1‑68 (MQ=255)
                    tGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTgg                                                   <  1:17242820/66‑1 (MQ=255)
                    tGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGtt                                                 >  1:38972236/1‑68 (MQ=255)
                     gCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagtgccgtagctaaaagca                                                >  1:14196802‑M2/1‑47 (MQ=255)
                            gCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgc                                         >  1:21266861/1‑68 (MQ=255)
                            gCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgc                                         >  1:7060360/1‑68 (MQ=255)
                            gCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgc                                         >  1:38882363/1‑68 (MQ=255)
                            gCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgc                                         >  1:5198448/1‑68 (MQ=255)
                            gCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgc                                         >  1:14708286/1‑68 (MQ=255)
                             cTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgcg                                        >  1:21002703/1‑68 (MQ=255)
                             cTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgcg                                        >  1:26833937/1‑68 (MQ=255)
                             cTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgcg                                        >  1:24358633/1‑68 (MQ=255)
                             cTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgcg                                        >  1:38262838/1‑68 (MQ=255)
                             cTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgcg                                        >  1:18234999/1‑68 (MQ=255)
                             cTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgcg                                        >  1:19953790/1‑68 (MQ=255)
                              tACGGCCCTGTTAATTGGTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgcg                                        <  1:10285729/67‑1 (MQ=255)
                              tACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgcg                                        <  1:9647468/67‑1 (MQ=255)
                              tACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgcg                                        <  1:10019820/67‑1 (MQ=255)
                              tACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgcg                                        <  1:7392109/67‑1 (MQ=255)
                              tACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgcg                                        <  1:13836778/67‑1 (MQ=255)
                              tACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgcg                                        <  1:4277211/67‑1 (MQ=255)
                              tACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgcg                                        <  1:15471095/67‑1 (MQ=255)
                              tACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgcg                                        <  1:3357408/67‑1 (MQ=255)
                              tACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGt                                       <  1:33834234/68‑1 (MQ=255)
                              tACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGt                                       <  1:21420686/68‑1 (MQ=255)
                              tACGGCACTGGTAATTGTTGGTATACTTTTGGTCGGTTACAGTGCCGACCGCCTGGTTTTTGCcgcg                                        <  1:27823555/67‑1 (MQ=255)
                               aCGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgcg                                        >  1:16689597/1‑66 (MQ=255)
                               aCGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCcgcg                                        >  1:20617476/1‑66 (MQ=255)
                                 ggCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTa                                    >  1:6204554/1‑68 (MQ=255)
                                  gCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTAt                                   >  1:26452415/1‑68 (MQ=255)
                                  gCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTAt                                   >  1:28306145/1‑68 (MQ=255)
                                   cACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagtgccgtagctaaaagcatctaacgtccttt                                   >  1:35093200‑M2/1‑33 (MQ=255)
                                    aCTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTAt                                   >  1:27331014/1‑66 (MQ=255)
                                    aCTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTAt                                   >  1:11675318/1‑66 (MQ=255)
                                    aCTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTAt                                   >  1:7810190/1‑66 (MQ=255)
                                      tGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCtt                               >  1:7662937/1‑68 (MQ=255)
                                       gTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCttt                              >  1:32636507/1‑68 (MQ=255)
                                         tAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTg                             >  1:29376512/1‑67 (MQ=255)
                                         tAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTATg                             >  1:10745211/1‑67 (MQ=255)
                                            ttgttgGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGa                         >  1:31056828/1‑68 (MQ=255)
                                            ttgttgGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGa                         >  1:34259752/1‑68 (MQ=255)
                                              gttgGTTTACTTTTTGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAAc                       <  1:22741868/68‑1 (MQ=255)
                                              gttgGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGaa                        >  1:11935647/1‑67 (MQ=255)
                                              gttgGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGaa                        >  1:25145108/1‑67 (MQ=255)
                                              gttgGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGaa                        >  1:14875782/1‑67 (MQ=255)
                                              gttgGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGaa                        >  1:2531339/1‑67 (MQ=255)
                                              gttgGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGaa                        >  1:24138407/1‑67 (MQ=255)
                                              gttgGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGaa                        >  1:25948716/1‑67 (MQ=255)
                                              gttgGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGaa                        >  1:38047755/1‑67 (MQ=255)
                                              gttgGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGaa                        >  1:3134189/1‑67 (MQ=255)
                                              gttgGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGaa                        >  1:30168468/1‑67 (MQ=255)
                                              gttgGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGaa                        >  1:2321041/1‑67 (MQ=255)
                                              gttgGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGaa                        >  1:23869401/1‑67 (MQ=255)
                                              gttgGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGaa                        >  1:19642646/1‑67 (MQ=255)
                                                tgGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAAcc                      <  1:4739421/67‑1 (MQ=255)
                                                tgGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAAcc                      <  1:6492003/67‑1 (MQ=255)
                                                 ggTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCtt                    >  1:13253730/1‑68 (MQ=255)
                                                        ttttGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCAt              >  1:17970538/1‑67 (MQ=255)
                                                         tttGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATc             >  1:21874989/1‑67 (MQ=255)
                                                         tttGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACATTTGGCATc             >  1:15266559/1‑67 (MQ=255)
                                                             gTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCccgcc        >  1:36068434/1‑68 (MQ=255)
                                                              tCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCccgcc        <  1:2209559/67‑1 (MQ=255)
                                                              tCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCccgcc        <  1:24464176/67‑1 (MQ=255)
                                                              tCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCccgcc        <  1:36368238/67‑1 (MQ=255)
                                                               cGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCcgccgc      <  1:5778146/68‑1 (MQ=255)
                                                               cGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCcgccgc      <  1:36972568/68‑1 (MQ=255)
                                                                gTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCt     <  1:15724935/68‑1 (MQ=255)
                                                                gTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCt     <  1:16500292/68‑1 (MQ=255)
                                                                  ttACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGa   <  1:35289689/68‑1 (MQ=255)
                                                                   |                                                                   
CCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGAT  >  CP009273/3333615‑3333749

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.