| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3851553 = | 461 (0.980) | 41 (0.110) | 10/86 | NT | 12.0% | coding (212/1494 nt) | yidJ | sulfatase/phosphatase superfamily protein |
| ? | CP009273 | 3851602 = | 248 (0.680) | coding (163/1494 nt) | yidJ | sulfatase/phosphatase superfamily protein | |||||
Only 100 of 972 total aligned reads displayed.
ATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGA > CP009273/3851486‑3851620 | gatagtctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgc < 1:36542942‑M1/1‑1 (MQ=255)gatagtctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgc < 1:34975780‑M1/1‑1 (MQ=255)aTAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCC > 1:2994696‑M1/1‑68 (MQ=255) tagtctggcggcggaaggtattcgctttaattccgcgtacacctgttcaccggtttgtacgcctgCAc < 1:7232179‑M1/3‑1 (MQ=255) tagtctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCAc < 1:26148063‑M1/3‑1 (MQ=255) tagtctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCAc < 1:462492‑M1/3‑1 (MQ=255) tagtctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCAc < 1:16702940‑M1/3‑1 (MQ=255) tagtctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCAc < 1:13118648‑M1/3‑1 (MQ=255) aGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCAC > 1:26830869‑M1/1‑68 (MQ=255) agtctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACg < 1:24117380‑M1/4‑1 (MQ=255) agtctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACg < 1:20648827‑M1/4‑1 (MQ=255) gtctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACgg < 1:7675302‑M1/5‑1 (MQ=255) ccGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGG > 1:35239680‑M1/1‑68 (MQ=255) ccGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGG > 1:3405154‑M1/1‑68 (MQ=255) cGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGG < 1:32083755‑M1/67‑1 (MQ=255) cGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGG < 1:21810613‑M1/67‑1 (MQ=255) ctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACggg > 1:1119844‑M1/62‑67 (MQ=255) ctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACggg > 1:28831166‑M1/62‑67 (MQ=255) ctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACggg > 1:1503778‑M1/62‑67 (MQ=255) ctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACggg > 1:24438537‑M1/62‑67 (MQ=255) ctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACgg > 1:10047013‑M1/62‑66 (MQ=255) tggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACGGGcc > 1:36887483‑M1/61‑68 (MQ=255) aTCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGG < 1:30951072‑M1/68‑1 (MQ=255) aTCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGG < 1:25087875‑M1/68‑1 (MQ=255) ctgcggaaggtattcgctttaattcagcctacacctgttcaccggtttgtacgcctgCACGGGCCgg > 1:19838721‑M1/58‑67 (MQ=255) cggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACGGGCCgg > 1:3927800‑M1/58‑67 (MQ=255) ggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtccgcctgCACGGGCCgg < 1:28408956‑M1/10‑1 (MQ=255) ggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACGGGCCGGa > 1:5990850‑M1/57‑67 (MQ=255) ggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACGGGCCGGAc > 1:16395200‑M1/57‑68 (MQ=255) cggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACGGGCCGGACt > 1:27036401‑M1/55‑67 (MQ=255) cggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACGGGCCGGACt > 1:11776801‑M1/55‑67 (MQ=255) cggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACGGGCCGGACt > 1:16093421‑M1/55‑67 (MQ=255) tAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTgg < 1:3752516/68‑1 (MQ=255) tAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTgg < 1:10309179/68‑1 (MQ=255) tAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTgg < 1:2112347/68‑1 (MQ=255) tAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTgg < 1:19501255/68‑1 (MQ=255) tAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGGCCACGGGCCTGACTgg < 1:37256468/68‑1 (MQ=255) aaaGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGt > 1:3462451/1‑68 (MQ=255) aGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:17684778/1‑68 (MQ=255) aGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:22685981/1‑68 (MQ=255) aGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:6719450/1‑68 (MQ=255) aGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:13038770/1‑68 (MQ=255) aGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:24821645/1‑68 (MQ=255) aGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:34278992/1‑68 (MQ=255) gTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:38584656/1‑67 (MQ=255) gTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:11571394/1‑67 (MQ=255) gTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:5352548/1‑67 (MQ=255) gTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:38899490/1‑67 (MQ=255) gTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGAGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:12353562/1‑67 (MQ=255) aGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAg < 1:619630/66‑1 (MQ=255) aGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGc < 1:14756140/67‑1 (MQ=255) aGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGc < 1:12776183/67‑1 (MQ=255) aGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGc < 1:38242940/67‑1 (MQ=255) aGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGc < 1:17164916/67‑1 (MQ=255) aGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGc < 1:29547580/67‑1 (MQ=255) aGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGc < 1:23661213/67‑1 (MQ=255) gcCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGc > 1:12070607/1‑64 (MQ=255) gcCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAg > 1:3608390/1‑68 (MQ=255) gcCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAg < 1:7487078/68‑1 (MQ=255) gcCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAg > 1:25333208/1‑68 (MQ=255) cccATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGAt > 1:29336346/1‑68 (MQ=255) aTAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATAcc < 1:1916279/68‑1 (MQ=255) aTAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATAcc < 1:22044840/68‑1 (MQ=255) aTAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATAcc < 1:1453112/68‑1 (MQ=255) aTAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATAcc < 1:10851872/68‑1 (MQ=255) aTAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATAcc < 1:25844661/68‑1 (MQ=255) aTAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATAcc < 1:27682687/68‑1 (MQ=255) aTAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATAcc < 1:5047508/68‑1 (MQ=255) aGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCgg < 1:30417030/68‑1 (MQ=255) aGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCgg < 1:13951725/68‑1 (MQ=255) aGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCgg < 1:18323912/68‑1 (MQ=255) aGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCgg > 1:3243156/1‑68 (MQ=255) gTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTatttaccggtatctacgct > 1:31792813‑M1/1‑49 (MQ=255) gTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGt > 1:28046585/1‑68 (MQ=255) gTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGt > 1:2336871/1‑68 (MQ=255) gTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGt > 1:37816055/1‑68 (MQ=255) gTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGt > 1:8403615/1‑68 (MQ=255) ggAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTaa > 1:26398976/1‑68 (MQ=255) ggAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTaa > 1:15538565/1‑68 (MQ=255) ggAGATGTTTTTGCCTGGCGCGACGTTGGTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTaa < 1:7867755/68‑1 (MQ=255) agaTGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAAt > 1:27384301/1‑68 (MQ=255) gaTGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAAt < 1:21397653/67‑1 (MQ=255) gATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATa < 1:33210215‑M2/68‑2 (MQ=255) tGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATagt > 1:5685195‑M2/1‑65 (MQ=255) tGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATag > 1:25565540‑M2/1‑65 (MQ=255) ttGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATagtccggc > 1:18108687‑M2/1‑60 (MQ=255) tGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATagtccggcc > 1:8981925‑M2/1‑59 (MQ=255) gCCTGGCGCGACGTTGCTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATagtccggccc > 1:31241822‑M2/1‑58 (MQ=255) accggtttgtacgcctgCACGGGCCGGACTGGGTAGCGTAGATACCGGTAAATAGTCCGGCCCGGGCa < 1:32837228‑M1/51‑1 (MQ=255) gcgACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAgg < 1:14271406/68‑1 (MQ=255) gcgACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAgg < 1:9405136/68‑1 (MQ=255) gACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCg < 1:33625564/68‑1 (MQ=255) gACGTGGTTGGCCCACGGGCCGGCCTGGTGAGCGTAGATACCGGTAAATaggccggcccgtggaccaa > 1:23063757‑M2/1‑49 (MQ=255) cGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGt < 1:1065764/67‑1 (MQ=255) gttgGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACaa > 1:35673590/1‑67 (MQ=255) cgcctgCACGGGCCGGACGGGTTAGCGTAGATACCGGTAAATGGTCCGGCCCGGGCAGGCGTACaaa < 1:8673538‑M1/61‑1 (MQ=255) tgGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAAcc > 1:22379949/1‑68 (MQ=255) cctgCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGGAGGCGGACAAACCg < 1:2009307‑M1/64‑1 (MQ=255) tCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGt > 1:1854469/1‑68 (MQ=255) CACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGa > 1:15866373‑M1/1‑68 (MQ=255) | ATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGA > CP009273/3851486‑3851620 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |