New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 108768 =322 (0.680)27 (0.060) 7/100 NT 8.1% coding (319/744 nt) zapD FtsZ stabilizer
?CP009273 108799 = 329 (0.780)coding (288/744 nt) zapD FtsZ stabilizer

Only 100 of 473 total aligned reads displayed.

CTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGG  >  CP009273/108702‑108835
                                                                  |                                                                   
caaacctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagc                                                                    >  1:27232702‑M1/67‑68 (MQ=255)
    gATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggc                                                                 >  1:25354666/1‑67 (MQ=255)
    gATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggc                                                                 >  1:24691438/1‑67 (MQ=255)
    cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggcg                                                                <  1:32155985‑M1/6‑1 (MQ=255)
    cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggcg                                                                <  1:35914269‑M1/6‑1 (MQ=255)
    cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggcg                                                                <  1:26653220‑M1/6‑1 (MQ=255)
     aTGCTCAGTCGCTGACGCACCAGCGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcgtcgc                                                               >  1:23730073/1‑68 (MQ=255)
         tCAGTCGCTGACGCACCAGAGCTATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaa                                                           >  1:25091095/1‑68 (MQ=255)
         tCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaa                                                           >  1:837797/1‑68 (MQ=255)
         tCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaa                                                           >  1:4265717/1‑68 (MQ=255)
         tCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaa                                                           >  1:38118331/1‑68 (MQ=255)
         tCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaa                                                           >  1:6572819/1‑68 (MQ=255)
         tCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGa                                                            <  1:1009248/67‑1 (MQ=255)
         tCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGa                                                            <  1:27681375/67‑1 (MQ=255)
          cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:10281147/68‑1 (MQ=255)
          cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:33889240/68‑1 (MQ=255)
          cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:19925825/68‑1 (MQ=255)
          cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:32527835/68‑1 (MQ=255)
          cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:31122184/68‑1 (MQ=255)
          cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:11106089/68‑1 (MQ=255)
            gTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAAtt                                                        >  1:16090925/1‑68 (MQ=255)
              cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAAtt                                                        <  1:7604354/66‑1 (MQ=255)
              cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAAtt                                                        <  1:36459119/66‑1 (MQ=255)
              cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAAtt                                                        <  1:18320986/66‑1 (MQ=255)
              cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTaa                                                      >  1:13947744/1‑68 (MQ=255)
              cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTaa                                                      >  1:4811079/1‑68 (MQ=255)
                   aCGCACCAGAGCAATCAAACGATCTTCACGCAGCAATTGCCCGATACGCGGCGCGGAAATTAATAc                                                   >  1:38581831/1‑66 (MQ=255)
                   aCGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATAc                                                   >  1:16371832/1‑66 (MQ=255)
                   aCGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATAc                                                   >  1:36326688/1‑66 (MQ=255)
                   aCGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATAc                                                   >  1:38864266/1‑66 (MQ=255)
                   aCGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATAc                                                   >  1:30582532/1‑66 (MQ=255)
                       aCCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTcc                                              >  1:1093493/1‑67 (MQ=255)
                        ccAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTcccc                                            >  1:25712063/1‑68 (MQ=255)
                             gctaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:16003849/65‑1 (MQ=255)
                             gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         >  1:32835316/1‑66 (MQ=255)
                             gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         >  1:12138008/1‑66 (MQ=255)
                             gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         >  1:35012877/1‑66 (MQ=255)
                             gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         >  1:16494062/1‑66 (MQ=255)
                               aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:21841103/66‑1 (MQ=255)
                               aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:20210515/66‑1 (MQ=255)
                               aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:12374125/66‑1 (MQ=255)
                                 tCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:12560191/45‑1 (MQ=255)
                                  gccgtattgaagcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                  <  1:5884823‑M1/36‑1 (MQ=255)
                                  cAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                  >  1:35504067/1‑68 (MQ=255)
                                  cAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                  >  1:10714213/1‑68 (MQ=255)
                                  cAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                  >  1:29065398/1‑68 (MQ=255)
                                     aCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               <  1:11789984/68‑1 (MQ=255)
                                     aCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               <  1:17546367/68‑1 (MQ=255)
                                     aCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               <  1:36842268/68‑1 (MQ=255)
                                       gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActtg                             >  1:2067059/1‑66 (MQ=255)
                                       gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgc                             <  1:16279610/68‑1 (MQ=255)
                                       gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgc                             <  1:23415486/68‑1 (MQ=255)
                                       gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               >  1:2224446/1‑66 (MQ=255)
                                       gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               >  1:32983901/1‑66 (MQ=255)
                                         tCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgctg                           >  1:26053442/1‑68 (MQ=255)
                                         tCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgctg                           >  1:14689544/1‑68 (MQ=255)
                                         tCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgctg                           >  1:3096757/1‑68 (MQ=255)
                                          cTTCACGCATAAATTGCCCGATACGCGGCTCGGAAATTAATACGCTCCACTCCGCTTTTAACTGCTGa                          <  1:15403009/68‑1 (MQ=255)
                                          cTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGa                          <  1:18790910/68‑1 (MQ=255)
                                           ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                         <  1:20490097/68‑1 (MQ=255)
                                           ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTGAACTGCTGaa                         >  1:26972338/1‑68 (MQ=255)
                                            tCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAAt                        <  1:13357472/68‑1 (MQ=255)
                                            agcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTACCTGCTGAAt                        <  1:19585102‑M1/46‑1 (MQ=255)
                                            agcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAAt                        <  1:37307543‑M1/46‑1 (MQ=255)
                                            agcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAAt                        <  1:39049805‑M1/46‑1 (MQ=255)
                                            agcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAAt                        <  1:33812685‑M1/46‑1 (MQ=255)
                                            agcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAAt                        <  1:5228122‑M1/46‑1 (MQ=255)
                                               cGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTaa                     >  1:15637964/1‑68 (MQ=255)
                                               cGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTaa                     >  1:21214982/1‑68 (MQ=255)
                                                  aGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATg                   <  1:34313344/67‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:35228152/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:4668660/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:14134291/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:17052857/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:33289379/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:7309462/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:17735434/66‑1 (MQ=255)
                                                      aTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCa              <  1:1719417/68‑1 (MQ=255)
                                                        tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt            <  1:9544101/68‑1 (MQ=255)
                                                        tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt            <  1:7016018/68‑1 (MQ=255)
                                                        tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt            <  1:21018905/68‑1 (MQ=255)
                                                        tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt            <  1:2950521/68‑1 (MQ=255)
                                                        gcagttaaaaGCGGCGCGGAATTTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt            <  1:9063186‑M1/58‑1 (MQ=255)
                                                          cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc          >  1:29915769/1‑68 (MQ=255)
                                                             taTACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:19084687/67‑1 (MQ=255)
                                                             gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:6102893/68‑1 (MQ=255)
                                                             gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:86106/68‑1 (MQ=255)
                                                             gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:1291870/68‑1 (MQ=255)
                                                             gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:28110588/68‑1 (MQ=255)
                                                             gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:17994914/68‑1 (MQ=255)
                                                             gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:1517892/68‑1 (MQ=255)
                                                             gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:553396/68‑1 (MQ=255)
                                                             gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:34543902/68‑1 (MQ=255)
                                                             gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:2303774/68‑1 (MQ=255)
                                                             gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:21371041/68‑1 (MQ=255)
                                                             gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:4468/68‑1 (MQ=255)
                                                             gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:37646942/68‑1 (MQ=255)
                                                                aCGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       >  1:24288814/1‑65 (MQ=255)
                                                                  GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg  <  1:28546548‑M1/68‑1 (MQ=255)
                                                                  GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg  >  1:7926977‑M1/1‑68 (MQ=255)
                                                                  |                                                                   
CTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGG  >  CP009273/108702‑108835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.