New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 108768 =322 (0.680)27 (0.060) 7/100 NT 8.1% coding (319/744 nt) zapD FtsZ stabilizer
?CP009273 108799 = 329 (0.780)coding (288/744 nt) zapD FtsZ stabilizer

Only 100 of 508 total aligned reads displayed.

AATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGA  >  CP009273/108733‑108866
                                                                  |                                                                   
   cAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                                                 >  1:9518458/1‑68 (MQ=255)
   cAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                                                 >  1:1936758/1‑68 (MQ=255)
   cAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                                                 >  1:29065398/1‑68 (MQ=255)
      aCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                                                              <  1:17546367/68‑1 (MQ=255)
      aCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                                                              <  1:11472693/68‑1 (MQ=255)
       cGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                                                              >  1:32168686/1‑67 (MQ=255)
        gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActtg                                                            >  1:2067059/1‑66 (MQ=255)
        gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgc                                                            <  1:16279610/68‑1 (MQ=255)
        gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgc                                                            <  1:20222925/68‑1 (MQ=255)
        gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgc                                                            <  1:23415486/68‑1 (MQ=255)
        gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                                                              >  1:32983901/1‑66 (MQ=255)
          tCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgctg                                                          >  1:4515864/1‑68 (MQ=255)
           gaagcattaattcagcagttaaaagcggcggggagcgtattaatttccgcgccgcTTTTAACTGCTGa                                                         <  1:16466700‑M2/13‑1 (MQ=255)
           cTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGa                                                         <  1:18790910/68‑1 (MQ=255)
            ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                                                        <  1:25124301/68‑1 (MQ=255)
            ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                                                        <  1:10948240/68‑1 (MQ=255)
             tCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAAt                                                       <  1:21069030/68‑1 (MQ=255)
             agcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAAt                                                       <  1:19715290‑M1/46‑1 (MQ=255)
             agcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAAt                                                       <  1:5228122‑M1/46‑1 (MQ=255)
             agcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAAt                                                       <  1:33812685‑M1/46‑1 (MQ=255)
             agcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACGGCtgatt                                                       <  1:15629600‑M1/46‑3 (MQ=255)
                    attcagcagttaaaagcggcggggagcgtattaatttccgcgccgcTTTTAACTGCTGAATTAATGCt                                                <  1:27652876‑M2/22‑1 (MQ=255)
                     ttcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCGGCTTTTAACTGCTGATTTAATGCt                                                <  1:35456653‑M1/53‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:35228152/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:33289379/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:13712685/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:36041872/66‑1 (MQ=255)
                       cagccgttaaacgcggcggggcgcgtataaattgccgccccgcTTTTAACTGCTGAATTAATGCTTCa                                             <  1:27957650‑M2/25‑1 (MQ=255)
                       cagcagataaaatccgcggggagcgtattaaatgccgcgccgcTTTTAACTGCTGAATTAATTCTTCa                                             <  1:8525068‑M2/25‑1 (MQ=255)
                         tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt                                           <  1:23868095/68‑1 (MQ=255)
                         tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt                                           <  1:2950521/68‑1 (MQ=255)
                         tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt                                           >  1:18092322/1‑68 (MQ=255)
                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc                                         >  1:365598/1‑68 (MQ=255)
                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc                                         >  1:11798924/1‑68 (MQ=255)
                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc                                         >  1:1638102/1‑68 (MQ=255)
                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc                                         >  1:14061742/1‑68 (MQ=255)
                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc                                         >  1:534287/1‑68 (MQ=255)
                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAGAc                                         >  1:25280526/1‑68 (MQ=255)
                            ccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACg                                        <  1:12760495/68‑1 (MQ=255)
                            ccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACg                                        <  1:19026360/68‑1 (MQ=255)
                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:30753220/68‑1 (MQ=255)
                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:86106/68‑1 (MQ=255)
                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:17710070/68‑1 (MQ=255)
                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:5809401/68‑1 (MQ=255)
                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:2303774/68‑1 (MQ=255)
                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:6335647/68‑1 (MQ=255)
                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:21371041/68‑1 (MQ=255)
                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:34543902/68‑1 (MQ=255)
                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:1595934/68‑1 (MQ=255)
                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:1517892/68‑1 (MQ=255)
                                 aCGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      >  1:4435174/1‑65 (MQ=255)
                                  cgcggcgcggAAATTAATACGCACCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTg                                  >  1:37261724/1‑68 (MQ=255)
                                   GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg                                 <  1:28546548‑M1/68‑1 (MQ=255)
                                   GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg                                 >  1:31310660‑M1/1‑68 (MQ=255)
                                     GGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGt                                >  1:28267060‑M1/1‑67 (MQ=255)
                                      GCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTcc                              <  1:38741988‑M1/68‑1 (MQ=255)
                                      GCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTcc                              <  1:36864177‑M1/68‑1 (MQ=255)
                                        GCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCAc                            >  1:13151358‑M1/1‑68 (MQ=255)
                                          ggAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACg                           <  1:26626226/67‑1 (MQ=255)
                                          ggAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACg                           <  1:4867062/67‑1 (MQ=255)
                                          ggAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACg                           <  1:6844142/67‑1 (MQ=255)
                                          ggAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACg                           <  1:8175758/67‑1 (MQ=255)
                                             aaTTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAg                       <  1:35856867/68‑1 (MQ=255)
                                                tAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGc                     >  1:2876858/1‑67 (MQ=255)
                                                  aTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCAc                   >  1:3092397/1‑67 (MQ=255)
                                                  aTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCAc                   >  1:30022688/1‑67 (MQ=255)
                                                  aTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCAc                   >  1:34411252/1‑67 (MQ=255)
                                                  aTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACg                  <  1:13387964/68‑1 (MQ=255)
                                                  aTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACg                  <  1:10017440/68‑1 (MQ=255)
                                                  aTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACg                  <  1:9202766/68‑1 (MQ=255)
                                                  aTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACg                  <  1:17027705/68‑1 (MQ=255)
                                                   tACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACg                  >  1:17211876/1‑67 (MQ=255)
                                                    aCGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCCCGcc                >  1:10454345/1‑68 (MQ=255)
                                                    aCGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGcc                >  1:34174913/1‑68 (MQ=255)
                                                    aCGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGcc                >  1:32793418/1‑68 (MQ=255)
                                                    aCGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGcc                >  1:4189042/1‑68 (MQ=255)
                                                    aCGCTCCCCGCCGCTTTTAACTGATGAATTAATGCTTCAATACGCCTCTGGACCACGCCAGGCACGcc                >  1:376572/1‑68 (MQ=255)
                                                     cGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCa               <  1:8887185/68‑1 (MQ=255)
                                                     cGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCa               >  1:1435275/1‑68 (MQ=255)
                                                     cGCTCCCCGCCGCTTTTAACTGCTGAATGAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCa               >  1:24560741/1‑68 (MQ=255)
                                                      gCTCCCCGCTGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCaa              >  1:38139001/1‑68 (MQ=255)
                                                      gCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCaa              >  1:14884823/1‑68 (MQ=255)
                                                      gCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCaa              >  1:7918069/1‑68 (MQ=255)
                                                      gCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCaa              <  1:7562044/68‑1 (MQ=255)
                                                        tCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCTCGCCAGGCCCGCCAAt             >  1:2712611/1‑67 (MQ=255)
                                                        tCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAAt             >  1:25847779/1‑67 (MQ=255)
                                                        tCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAAt             <  1:21823671/67‑1 (MQ=255)
                                                           ccgccgCTTTTAACTGCTGAATTAATGCTTCACTACGGCTCTGGTCCACGCCAGGCACGCCAATCCAg         >  1:31840432/1‑68 (MQ=255)
                                                            cgccgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        <  1:124163‑M2/62‑1 (MQ=255)
                                                            cgccgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        <  1:25585894‑M2/62‑1 (MQ=255)
                                                            cgccgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        <  1:10623284‑M2/62‑1 (MQ=255)
                                                             gccgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        >  1:18424943‑M2/6‑67 (MQ=255)
                                                              ccgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        >  1:33593438‑M2/5‑66 (MQ=255)
                                                              ccgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        >  1:16166178‑M2/5‑66 (MQ=255)
                                                                gcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCCCGCCAATCCAGGTCTg    >  1:22222708‑M2/3‑68 (MQ=255)
                                                                gcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTg    >  1:26848877‑M2/3‑68 (MQ=255)
                                                                  ttttAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTgg   <  1:19897019/67‑1 (MQ=255)
                                                                  ttttAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGa  <  1:6086391/68‑1 (MQ=255)
                                                                  ttttAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGa  <  1:7198870/68‑1 (MQ=255)
                                                                  ttttAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGa  <  1:26155884/68‑1 (MQ=255)
                                                                  |                                                                   
AATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGA  >  CP009273/108733‑108866

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.