| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1066816 = | 469 (0.990) | 29 (0.070) | 11/98 | NT | 6.5% | coding (406/801 nt) | rutD | putative aminoacrylate hydrolase, reactive intermediate detoxification |
| ? | CP009273 | 1066859 = | 421 (1.020) | coding (363/801 nt) | rutD | putative aminoacrylate hydrolase, reactive intermediate detoxification | |||||
Only 100 of 697 total aligned reads displayed.
GCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCA > CP009273/1066751‑1066882 | attatcccgcgtcggtaactgtgctgatcagcgttaacggctggctacgaataaacgcccatacgcg < 1:17690250‑M1/2‑1 (MQ=255)attatcccgcgtcggtaactgtgctgatcagcgttaacggctggctacgaataaacgcccatacgcg < 1:12827648‑M1/2‑1 (MQ=255)attatcccgcgtcggtaactgtgctgatcagcgttaacggctggctacgaataaacgcccatacgcg < 1:27845153‑M1/2‑1 (MQ=255) gggCCGCCATCCTGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:20270068/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:39101358/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:21672636/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:23252016/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc > 1:37842625/1‑67 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:5637926/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc > 1:17945393/1‑67 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:37367832/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:2648321/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:15996680/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:26908622/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:36257013/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:34114992/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:31918346/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:9769902/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:11923898/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:1150885/67‑1 (MQ=255) gggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc < 1:11044363/67‑1 (MQ=255) ggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgcc > 1:13785336/1‑66 (MQ=255) atcccgcgtcggtaactgtgctgatcagcgttaacggctggctacgaataaacgcccatacgcgccgc > 1:3482809‑M1/63‑68 (MQ=255) gccgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgccgc < 1:20593343/67‑1 (MQ=255) gccgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgccgc < 1:28121170/67‑1 (MQ=255) gccgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgccgc < 1:22196518/67‑1 (MQ=255) gccgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgccgc < 1:23543297/67‑1 (MQ=255) gccgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgccgc < 1:32706625/67‑1 (MQ=255) gccgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgccgc < 1:30173370/67‑1 (MQ=255) gccgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgccgc < 1:25111677/67‑1 (MQ=255) gccgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgccgc < 1:29475802/67‑1 (MQ=255) gccgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgccgc < 1:19896750/67‑1 (MQ=255) gccgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgccgc < 1:14696767/67‑1 (MQ=255) ccgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCt < 1:15671952/67‑1 (MQ=255) cccgcgtcggtaactgtgctgatcagcgttaacggctggctacgaataaacgcccatacgcgcc < 1:34601859‑M1/4‑1 (MQ=255) cccgcgtcggtaactgtgctgatcagcgttaacggctggctacgaataaacgcccatacgcgcc < 1:13367319‑M1/4‑1 (MQ=255) cccgcgtcggtaactgtgctgatcagcgttaacggctggctacgaataaacgcccatacgcgcc < 1:30746089‑M1/4‑1 (MQ=255) cccgcgtcggtaactgtgctgatcagcgttaacggctggctacgaataaacgcccatacgcgcc < 1:19070989‑M1/4‑1 (MQ=255) cgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCtat < 1:3858012/68‑1 (MQ=255) cgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCtat < 1:8127585/68‑1 (MQ=255) cgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCtat < 1:16385518/68‑1 (MQ=255) cgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCtat < 1:188004/68‑1 (MQ=255) cgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCtat < 1:4869273/68‑1 (MQ=255) cgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCtat < 1:38085908/68‑1 (MQ=255) cgccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCtat < 1:22460473/68‑1 (MQ=255) gccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCtata < 1:38385636/68‑1 (MQ=255) cATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACa < 1:17235178/68‑1 (MQ=255) cATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACa < 1:6312827/68‑1 (MQ=255) cATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACa < 1:36651522/68‑1 (MQ=255) cATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACa < 1:24414748/68‑1 (MQ=255) cATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACa < 1:7863281/68‑1 (MQ=255) aTCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAg > 1:10004891/1‑68 (MQ=255) aTCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAg > 1:7362163/1‑68 (MQ=255) aTCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAg > 1:27168672/1‑68 (MQ=255) tCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGt < 1:7714150/68‑1 (MQ=255) cggcggGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAAt < 1:7030821/65‑1 (MQ=255) cggcggGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGt > 1:13975876/1‑68 (MQ=255) cggcggGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGt < 1:33305344/68‑1 (MQ=255) tgtgctgatcagcgttaacggctggctacgaataaacgcccatacgCGCCGGTATACAGTAATCgttg < 1:1025931‑M1/22‑2 (MQ=255) gATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCtat < 1:8950668/51‑1 (MQ=255) tAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGaa < 1:3214653/67‑1 (MQ=255) tAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGaa < 1:19611456/67‑1 (MQ=255) tAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGaa < 1:22645533/67‑1 (MQ=255) agagGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAAcc < 1:1227626/68‑1 (MQ=255) agagGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAAcc < 1:13186357/68‑1 (MQ=255) ggAACAACGGCTGCGCTTCCCCCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGa > 1:14263624/1‑68 (MQ=255) ggAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGa > 1:26213613/1‑68 (MQ=255) aacaacGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGaaa > 1:15077438/1‑68 (MQ=255) aacaacGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGaaa > 1:35160039/1‑68 (MQ=255) aacaacGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTAGTCAGTAATCGTTCGCGATCCTGaaa > 1:37656326/1‑68 (MQ=255) gttaacggctggctacgaataaacgcccatacgCGCCGGTATACAGTAATCGTTCGCGGACCTgaac < 1:10555435‑M1/34‑2 (MQ=255) acaacGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGaaa > 1:6005154/1‑67 (MQ=255) aacGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACa > 1:673903/1‑68 (MQ=255) aacGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACa > 1:4204341/1‑68 (MQ=255) ggCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAgcg > 1:32861232/1‑68 (MQ=255) gCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAgcg > 1:31053598/1‑67 (MQ=255) tGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAgcggc < 1:8707332/67‑1 (MQ=255) gcgcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGgcgc < 1:36051062/68‑1 (MQ=255) gcgcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGgcgc < 1:4485039/68‑1 (MQ=255) gcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGcgcg < 1:31353118/67‑1 (MQ=255) gcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGt < 1:33672713/68‑1 (MQ=255) ttCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTAt > 1:29832167/1‑68 (MQ=255) cACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATgg > 1:257489/1‑67 (MQ=255) aCCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGc < 1:21346427/68‑1 (MQ=255) aCCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGc > 1:9313670/1‑68 (MQ=255) aCCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGc > 1:35560643/1‑68 (MQ=255) aCCCAGGCCTGCGGGCCGCCGCTATACAGTAATCGTTCGCGAACCGGAAAACAGCGGCGCGTATGGGc < 1:23924614/68‑1 (MQ=255) cccATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCg > 1:28558099/1‑68 (MQ=255) ccATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCgg > 1:3174069/1‑67 (MQ=255) ccATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGt > 1:22845930/1‑68 (MQ=255) cgcccatacgCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTAt < 1:2928435‑M1/58‑1 (MQ=255) ccTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTAt > 1:18407144/1‑67 (MQ=255) ccTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTAt > 1:21099259/1‑67 (MQ=255) ccTGCGCGCCGCCGCTATACAGTAATCGTAGGCGAACCTTAAAACAGCGGCGCGTATGGGCGGTTAt > 1:5268084/1‑67 (MQ=255) cTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTAtt < 1:36882119/67‑1 (MQ=255) cTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTAtt < 1:12501152/67‑1 (MQ=255) gcgagcCGCCGCTATACAGTAATCGTTCGCGAAGCTGAAAAAAGCGGCGCGTATGGGCGTTTATTCGt < 1:16684761/68‑1 (MQ=255) acgcgcCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGGGTATTCGt > 1:32468104/2‑68 (MQ=255) gcgcCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTa > 1:34414781/1‑67 (MQ=255) acgCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTag < 1:29042466‑M1/64‑1 (MQ=255) | GCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCA > CP009273/1066751‑1066882 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |