| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3293574 = | 446 (0.950) | 22 (0.060) | 10/90 | NT | 6.5% | coding (250/303 nt) | yhbQ | GIY‑YIG nuclease superfamily protein |
| ? | CP009273 | 3293608 = | 272 (0.720) | coding (284/303 nt) | yhbQ | GIY‑YIG nuclease superfamily protein | |||||
Only 100 of 640 total aligned reads displayed.
ACGGGCGGAATATCGCGTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAT > CP009273/3293507‑3293639 | cGGGCGGAATATCGCGTTAAGCAACTGCCC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAgg > 1:14468440/1‑68 (MQ=255) cGGGCGGAATATCGCGTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAgg > 1:5602291/1‑68 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACC‑AACCGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:36643486/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACC‑AAACGGGAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:6835676/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg > 1:30571558/1‑68 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:10893607/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:32974833/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:13002898/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:39135952/68‑1 (MQ=255) ggCGGAATATCGCGTTAAGCAACTGACC‑AAACGGCAAAAAGCGCGTCTGGTAGCGGAAGGCGCAGGGt > 1:34795078/1‑68 (MQ=255) acgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgggg < 1:9206329‑M1/3‑1 (MQ=255) gCGGAATATCGCGTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGtt > 1:24079870/1‑68 (MQ=255) gCGGAATATCGCGTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGt < 1:34559159/67‑1 (MQ=255) cgcgctgaatggggttagctgcctggtttattatcacgagcatttcaatcgcttttaatctccgggg > 1:11318876‑M1/65‑67 (MQ=255) cgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgggg > 1:27302698‑M1/65‑67 (MQ=255) cgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgggg > 1:19889054‑M1/65‑67 (MQ=255) cgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgggg > 1:25702312‑M1/65‑67 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:504888‑M1/64‑68 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:38664434‑M1/64‑68 (MQ=255) ggAATATCGCGTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGttt < 1:37114915/67‑1 (MQ=255) ggAATATCGCGTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGttt < 1:35258078/67‑1 (MQ=255) tgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGTTTGc > 1:29098969‑M1/60‑67 (MQ=255) tatCGCTTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGGGGAAGGCGCAGGGTTTGCaga < 1:13339408/68‑1 (MQ=255) tatCGCGTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga > 1:28683436/1‑68 (MQ=255) gaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGTTTGCag > 1:7723186‑M1/59‑68 (MQ=255) atCGCGTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga > 1:29925994/1‑67 (MQ=255) atggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGTTTGCaga > 1:3753956‑M1/57‑67 (MQ=255) atggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGTTTGCag < 1:15276028‑M1/10‑1 (MQ=255) atggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGTTTGCag < 1:37937475‑M1/10‑1 (MQ=255) cgcgTTAAGCAACTGACC‑ACACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:15540718/68‑1 (MQ=255) cgcgTTAAGCAACTGACC‑AAACGGCAAAAAGCGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga > 1:2359782/1‑65 (MQ=255) cgcgTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:2641787/68‑1 (MQ=255) cgcgTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:10549241/68‑1 (MQ=255) cgcgTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:2767516/68‑1 (MQ=255) cgcgTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:9281441/68‑1 (MQ=255) cgcgTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:30703439/68‑1 (MQ=255) cgcgTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:33357201/68‑1 (MQ=255) cgcgTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:35481939/68‑1 (MQ=255) cgcgTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:35742536/68‑1 (MQ=255) cgcgTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:21187958/68‑1 (MQ=255) cgcgTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:22118702/68‑1 (MQ=255) gcgTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga > 1:24356175/1‑64 (MQ=255) gcgTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga > 1:8613412/1‑64 (MQ=255) gcgTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga > 1:1741448/1‑64 (MQ=255) gcgTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga > 1:29326371/1‑64 (MQ=255) cgTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt > 1:12062048/1‑68 (MQ=255) gTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGtt > 1:28309411/1‑68 (MQ=255) gTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:19068300/67‑1 (MQ=255) gTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:35079784/67‑1 (MQ=255) gTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:12423859/67‑1 (MQ=255) gTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:35929831/67‑1 (MQ=255) gCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCa > 1:14069898/1‑68 (MQ=255) aaCTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAg < 1:23380165/67‑1 (MQ=255) aaCTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGt < 1:5966556/68‑1 (MQ=255) aCTGACCAAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAg > 1:16426139/1‑67 (MQ=255) aCTGACC‑AAACGGCAAAACGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTc < 1:38901364/68‑1 (MQ=255) aCTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAg > 1:8269778/1‑66 (MQ=255) aCTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTc < 1:28043371/68‑1 (MQ=255) aCTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTc < 1:31012634/68‑1 (MQ=255) aCTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTc < 1:5231544/68‑1 (MQ=255) aCTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTc < 1:12853786/68‑1 (MQ=255) tGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCATTCt > 1:14839412/1‑67 (MQ=255) tGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCt > 1:2089070/1‑67 (MQ=255) tGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTg < 1:4173031/68‑1 (MQ=255) tGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTg < 1:30208748/68‑1 (MQ=255) gagtatcacgagcatttcaatcgcttttaatctccgGGGTTTGCAGAGCTGTTAAGCAGTCTGCaaa < 1:36561605‑M1/31‑1 (MQ=255) aaCGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAAcc < 1:30356894/68‑1 (MQ=255) aaCGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAAcc < 1:36170123/68‑1 (MQ=255) aaCGGCAAAAAGAGCGTCGGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAAcc < 1:22478014/68‑1 (MQ=255) gCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCgg > 1:12606004/1‑68 (MQ=255) aaaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGga < 1:20547979/67‑1 (MQ=255) cgagcatttcaatcgcttttaatctccgGGGTTTGCaga < 1:18334908‑M1/11‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:9556986/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:1160677/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:36756359/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:16941595/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:23103942/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:22620399/68‑1 (MQ=255) aaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGAt < 1:4741232/68‑1 (MQ=255) aaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGAtt > 1:24668863/1‑68 (MQ=255) gcatttcaatcgcttttaatctccgGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAGCCCCGGAGATTa < 1:26233713‑M1/43‑1 (MQ=255) gCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTaaa < 1:3158457/67‑1 (MQ=255) gTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGc > 1:10173833/1‑68 (MQ=255) cTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCg < 1:13672718/67‑1 (MQ=255) cTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCg < 1:32555166/67‑1 (MQ=255) cTGGTAGCGGAAGCCGCAGGGTTTCCAGAGCTGTTAACCAGTCTGCAAACCCCGGAGATTAAAAGCg < 1:7021723/67‑1 (MQ=255) aatcgcttttaatctccgGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGa < 1:6315944‑M1/50‑1 (MQ=255) tGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGAt < 1:33891779/68‑1 (MQ=255) aaGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGc > 1:32815465/1‑67 (MQ=255) aaGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGc < 1:21677714/67‑1 (MQ=255) aaGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGc < 1:18789809/67‑1 (MQ=255) aaGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGc > 1:1589804/1‑67 (MQ=255) aGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTc < 1:17955330/68‑1 (MQ=255) gcgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGt > 1:25394101/1‑68 (MQ=255) cgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCg < 1:21952264/66‑1 (MQ=255) cgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGt < 1:26876265/67‑1 (MQ=255) cgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGt < 1:8910094/67‑1 (MQ=255) cgcAGGGTTTGCAGAGATGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCg < 1:7378986/66‑1 (MQ=255) gcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTg < 1:16521862/67‑1 (MQ=255) aGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAt < 1:38307774/67‑1 (MQ=255) | ACGGGCGGAATATCGCGTTAAGCAACTGACC‑AAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAT > CP009273/3293507‑3293639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |