| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3293574 = | 446 (0.950) | 22 (0.060) | 10/90 | NT | 6.5% | coding (250/303 nt) | yhbQ | GIY‑YIG nuclease superfamily protein |
| ? | CP009273 | 3293608 = | 272 (0.720) | coding (284/303 nt) | yhbQ | GIY‑YIG nuclease superfamily protein | |||||
Only 100 of 625 total aligned reads displayed.
CGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGCGTC > CP009273/3293541‑3293673 | cGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAAcacc > 1:37356854/1‑68 (MQ=255) aaaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGga < 1:20547979/67‑1 (MQ=255) aaaaaGAGCGGCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGga < 1:22684667/67‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:9556986/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:23103942/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:16941595/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:27018852/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:1160677/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:35945641/68‑1 (MQ=255) aaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGAt < 1:5058401/68‑1 (MQ=255) gcatttcaatcgcttttaatctccgGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTa < 1:2999278‑M1/43‑1 (MQ=255) agagCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTa > 1:29672527/1‑68 (MQ=255) gCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTaaaa > 1:4752899/1‑68 (MQ=255) gTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGc > 1:10173833/1‑68 (MQ=255) cTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCg < 1:36692367/67‑1 (MQ=255) tGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGAt < 1:25281221/68‑1 (MQ=255) tcgcttttaatctccggggtttgcagactgcttaacagctctgcaaacccCGGAGATTAAAAGCGAtt < 1:6315944‑M2/18‑1 (MQ=255) cgcttttaatctccgGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTg < 1:21029870‑M1/53‑1 (MQ=255) aGCGGAAGGCGCAGGGTTTGCAGAGCTGTTCAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGa < 1:7274496/67‑1 (MQ=255) aGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGaa > 1:35426159/1‑68 (MQ=255) aGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGa < 1:9262196/67‑1 (MQ=255) ggAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAAt > 1:3886074/1‑67 (MQ=255) ggAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATg < 1:23403739/68‑1 (MQ=255) gAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAAt > 1:3797564/1‑66 (MQ=255) aaGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGc > 1:1589804/1‑67 (MQ=255) aaGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGc > 1:18580915/1‑67 (MQ=255) tctccgGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCg < 1:2498551‑M1/62‑1 (MQ=255) cgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCg < 1:13779051/66‑1 (MQ=255) cgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGt < 1:6969936/67‑1 (MQ=255) gcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTg < 1:16521862/67‑1 (MQ=255) aGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAt < 1:36578657/67‑1 (MQ=255) aGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAt < 1:22018833/67‑1 (MQ=255) aGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAt < 1:18330277/67‑1 (MQ=255) aGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAt < 1:8118738/67‑1 (MQ=255) aGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAt < 1:17368164/67‑1 (MQ=255) GGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATAc < 1:22479321‑M1/67‑1 (MQ=255) GTTTGCAGAGCTTTTAAGCAGGCTCCAAACCCCGGAGATTAAACGCGATTGAAATGCTCGTGATa > 1:31576559‑M1/1‑65 (MQ=255) GTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATa > 1:1773306‑M1/1‑65 (MQ=255) GTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATa > 1:37074116‑M1/1‑65 (MQ=255) GTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATa > 1:14658422‑M1/1‑65 (MQ=255) ttccagactgcttaacagctctgcaaacccCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCaa < 1:6652959‑M2/38‑1 (MQ=255) TTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCa > 1:36883238‑M1/1‑67 (MQ=255) CAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCa < 1:21408712‑M1/68‑1 (MQ=255) CAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCa < 1:11898857‑M1/68‑1 (MQ=255) CAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCa < 1:21268961‑M1/68‑1 (MQ=255) CAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCa < 1:26039071‑M1/68‑1 (MQ=255) CAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCa < 1:13079633‑M1/68‑1 (MQ=255) CAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCa < 1:18882208‑M1/68‑1 (MQ=255) CAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCa < 1:15636361‑M1/68‑1 (MQ=255) AGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAg < 1:31132447‑M1/68‑1 (MQ=255) AGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAg < 1:900567‑M1/68‑1 (MQ=255) AGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAg < 1:35241732‑M1/68‑1 (MQ=255) AGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAg < 1:8427378‑M1/68‑1 (MQ=255) GAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAg < 1:8782111‑M1/67‑1 (MQ=255) GAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAg < 1:21787451‑M1/67‑1 (MQ=255) GAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAg < 1:13412305‑M1/67‑1 (MQ=255) gCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAgg < 1:20122921/66‑1 (MQ=255) gCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAgg < 1:20738095/66‑1 (MQ=255) gCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGcc > 1:11367118/1‑68 (MQ=255) gCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGcc > 1:25667000/1‑68 (MQ=255) tGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCgg > 1:10730126/1‑68 (MQ=255) tGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCg < 1:12741070/67‑1 (MQ=255) tGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCg < 1:1125436/67‑1 (MQ=255) tGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCg < 1:24787178/67‑1 (MQ=255) atgCAGTCTGCAAACCCCTGAGATTAAAAGCGATTGATATGCTAGTGATACTCAACGAGGCCGGTAAc < 1:4080457/66‑1 (MQ=255) aaGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAAc < 1:3387633/68‑1 (MQ=255) aaGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAAc < 1:6021771/68‑1 (MQ=255) aaGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAAc < 1:33474837/68‑1 (MQ=255) aaGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAAc < 1:3235740/68‑1 (MQ=255) aaGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAAc < 1:38330239/68‑1 (MQ=255) aaGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAAc < 1:26631098/68‑1 (MQ=255) aaGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAAc < 1:23736827/68‑1 (MQ=255) aGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAAc > 1:3018362/1‑67 (MQ=255) gCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACg > 1:7687989/1‑67 (MQ=255) gCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACg > 1:24338777/1‑67 (MQ=255) gCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACg > 1:33272790/1‑67 (MQ=255) gCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACg > 1:32702816/1‑67 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAACTGCTCGTGATACTCAACCAGGCCGGTACCGCCa > 1:28505256/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGcc < 1:35749849/67‑1 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGcc < 1:23994150/67‑1 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGcc < 1:2901695/67‑1 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGc < 1:34095994/66‑1 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGc < 1:2796583/66‑1 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCa > 1:30387120/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCa > 1:11105281/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCa > 1:12573715/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCa > 1:150297/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCa > 1:1959880/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCa > 1:37761850/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCa > 1:31965955/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCa > 1:4356493/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCa > 1:34392901/1‑68 (MQ=255) aGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCa > 1:38979098/1‑68 (MQ=255) tctgcaaacccCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCAt > 1:34683637‑M2/12‑67 (MQ=255) gcaaacccCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCa > 1:27509156‑M2/9‑67 (MQ=255) aacccCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAgcgc > 1:30857351‑M2/6‑68 (MQ=255) aacccCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAgcgc > 1:26236303‑M2/6‑68 (MQ=255) cccCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGcgcg > 1:5161363‑M2/4‑67 (MQ=255) ccCTGAGATTAAAAGCGATTGAAATGATCGTGATACTAAACAAGGCCGGTAACGCCATTCAGCGCGTc < 1:5675312‑M2/66‑1 (MQ=255) ccCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGCGTc < 1:10358053‑M2/66‑1 (MQ=255) | CGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGATACTCAACCAGGCCGGTAACGCCATTCAGCGCGTC > CP009273/3293541‑3293673 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |