| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3392134 | 512 (1.090) | 24 (0.060) | 11/96 | NT | 5.1% | coding (101/489 nt) | mreD | cell wall structural complex MreBCD transmembrane component MreD |
| ? | CP009273 | = 3392148 | 453 (1.120) | coding (87/489 nt) | mreD | cell wall structural complex MreBCD transmembrane component MreD | |||||
Only 100 of 715 total aligned reads displayed.
ACATTTACGCGATGAGGCAAGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAGGAAAGAGAGCCAG > CP009273/3392068‑3392199 | tttACGCGATGAGGCAAGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAAc > 1:37210981/1‑68 (MQ=255) ttACGCGATGAGGCAAGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACa < 1:8026681/68‑1 (MQ=255) gcgATGAGGCAAGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCa > 1:23499431/1‑68 (MQ=255) gcgATGAGGCAAGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCa > 1:24190344/1‑68 (MQ=255) gcgATGAGGCAAGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCa > 1:27133985/1‑68 (MQ=255) gcgATGAGGCAAGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCa > 1:21785229/1‑68 (MQ=255) gcgATGAGGCAAGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCa > 1:19626121/1‑68 (MQ=255) gcgATGAGGCAAGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCa > 1:31485468/1‑68 (MQ=255) gcgATGAGGCAAGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCa > 1:1736730/1‑68 (MQ=255) gATGAGGCAAGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAgg < 1:25176882/68‑1 (MQ=255) gATGAGGCAAGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAg < 1:940554/67‑1 (MQ=255) tGAGGCAAGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGt < 1:19091576/67‑1 (MQ=255) gAGGCAAGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTa > 1:15663668/1‑68 (MQ=255) gAGGCAAGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTa < 1:28560060/68‑1 (MQ=255) gCAAGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTAtcc < 1:4781608‑M2/68‑4 (MQ=255) gCAAGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTAtcc < 1:30549374‑M2/68‑4 (MQ=255) aaGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTAtccgg > 1:30053499‑M2/1‑63 (MQ=255) aaGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTAtccg < 1:28237501‑M2/67‑5 (MQ=255) aaGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTAtccg < 1:443922‑M2/67‑5 (MQ=255) aaGGCCAGGAGCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTAtccgg > 1:13507327‑M2/1‑63 (MQ=255) ggCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAtaacctgattgttttccggcc > 1:6960591‑M1/1‑47 (MQ=255) ggCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTAtccggcc < 1:15216179‑M2/68‑8 (MQ=255) ggCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTAtccggcc < 1:27882430‑M2/68‑8 (MQ=255) ccAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAg > 1:10486735/1‑68 (MQ=255) ccAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGACCAg > 1:7187156/1‑68 (MQ=255) cAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTAtccggccaa > 1:5957405‑M2/1‑58 (MQ=255) cAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAgg < 1:29829202/68‑1 (MQ=255) cAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAgg < 1:34930924/68‑1 (MQ=255) cAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAgg < 1:18017106/68‑1 (MQ=255) aTCCAATACACCAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAggg < 1:18517274/65‑1 (MQ=255) aTCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAggg < 1:28929638/65‑1 (MQ=255) aTCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGc < 1:16499278/66‑1 (MQ=255) aTCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCAt > 1:19850657/1‑68 (MQ=255) aTCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCAt > 1:6344704/1‑68 (MQ=255) aTCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCAt > 1:38350119/1‑68 (MQ=255) aTCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCAt > 1:8170183/1‑68 (MQ=255) accAATACAACAAGATGAGTAAAACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATg > 1:35895411/2‑68 (MQ=255) aTACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGAttt > 1:10321919/1‑68 (MQ=255) tACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGAttt > 1:13000661/1‑67 (MQ=255) tACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTg < 1:11933981/68‑1 (MQ=255) acagcaAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTgc > 1:8575511/1‑68 (MQ=255) acaacaAGATGAGTAACACCCAGTTTGGCCGGAtaacctgattgttttccggccaaactgggtgtt > 1:28837372‑M1/1‑33 (MQ=255) acaacaAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTgc > 1:31265590/1‑68 (MQ=255) acaacaAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTgc > 1:31848848/1‑68 (MQ=255) acaacaAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTgc > 1:23244977/1‑68 (MQ=255) acaacaAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTgc > 1:14332383/1‑68 (MQ=255) acaacaAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTgc > 1:7598047/1‑68 (MQ=255) acaacaAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTgc > 1:8384556/1‑68 (MQ=255) acaaGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTgcagc > 1:11569663/1‑68 (MQ=255) acaaGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTgcagc > 1:4093911/1‑68 (MQ=255) acaaGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTgcagc > 1:18722887/1‑68 (MQ=255) acaaGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTgcagc > 1:9715110/1‑68 (MQ=255) aGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAAc < 1:9195336/68‑1 (MQ=255) gATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACa > 1:10104595/1‑68 (MQ=255) tGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAgc < 1:1124419/68‑1 (MQ=255) tGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAgc < 1:10727143/68‑1 (MQ=255) tGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAgc < 1:28096355/68‑1 (MQ=255) tGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAgc < 1:8851135/68‑1 (MQ=255) aGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAgcgc > 1:35361186/1‑68 (MQ=255) aGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAgcgc > 1:33917991/1‑68 (MQ=255) gTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAgcgc < 1:16231090/67‑1 (MQ=255) gTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAgcgc < 1:36216875/67‑1 (MQ=255) aaCACCCAGTTTGGCCGGAAAACAATCAGGTTAtccggccaaactgggtgttactcatcttgttgtat > 1:34452862‑M2/1‑33 (MQ=255) aaCACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAAt > 1:22549457/1‑68 (MQ=255) aaCACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAAt > 1:26368249/1‑68 (MQ=255) aaCACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAAt > 1:21155116/1‑68 (MQ=255) acacCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATg < 1:3700437/68‑1 (MQ=255) cacCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGa < 1:30813336/68‑1 (MQ=255) cacCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGa < 1:24614431/68‑1 (MQ=255) acCCAGTTTGGCCGGAtaacctgattgttttccggccatactgggtgttactcatcttgttgtattgg > 1:22283173‑M1/1‑16 (MQ=255) acCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAg > 1:20649331/1‑68 (MQ=255) acCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAg > 1:17762790/1‑68 (MQ=255) acCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAg < 1:30347691/68‑1 (MQ=255) acCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAg < 1:19468282/68‑1 (MQ=255) acCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAg > 1:2091181/1‑68 (MQ=255) acCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAg > 1:32439518/1‑68 (MQ=255) acCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAg > 1:39051972/1‑68 (MQ=255) acCCAGTTTGGCCGGAAAACAATCAGGTTATCCCGCCAGGGCATGATTTGCAGCACCAGCGCAATGAg > 1:20362698/1‑68 (MQ=255) cccAGTTTGGCCGGAAAACAATCAGGTTAtccggccaaactgggtgttactcatcttgttgtattgga > 1:25460568‑M2/1‑29 (MQ=255) cccAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAgg < 1:5295003/68‑1 (MQ=255) ccAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAGGa > 1:33407539/1‑68 (MQ=255) ccAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAGGa > 1:20117803/1‑68 (MQ=255) cAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAGGaa < 1:24971514/68‑1 (MQ=255) tttGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAGGAAaga > 1:18891659/1‑68 (MQ=255) tttGGCCGG‑AAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAGGAAagag > 1:21486240/1‑68 (MQ=255) ttGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAGGAAagag > 1:36534697/1‑68 (MQ=255) tGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAGGAAagaga < 1:25781154/68‑1 (MQ=255) gCCGGAtaacctgattgttttccggccaaactgggtgttactcatcttgttgtattggatcctggcct > 1:22997233‑M1/1‑6 (MQ=255) gCCGGAtaacctgattgttttccggccaaactgggtgttactcatcttgttgtattgga > 1:37459969‑M1/1‑6 (MQ=255) ccGGAtaacctgattgttttccggccaaactgggtgttactcatcttgttgtattggatcctggcctt > 1:38593953‑M1/1‑5 (MQ=255) ccGGAtaacctgattgttttccggccaaactgggtgttactcatcttgttgtattggatcctggcctt > 1:27581980‑M1/1‑5 (MQ=255) ccGGAtaacctgattgttttccggccaaactgggtgttactcatcttgttgtattggatcctggcctt > 1:33146572‑M1/1‑5 (MQ=255) ccGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAGGAAAGAGAGc > 1:1712780/1‑67 (MQ=255) cGGAtaacctgattgttttccggccaaactgggtgttactcatcttgttgtattggatcctggcctt < 1:26094602‑M1/67‑64 (MQ=255) cGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAGGAAAGAGAGCCa > 1:37870538/1‑68 (MQ=255) ggAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAGGAAAGAGAGCCAg < 1:23867882/68‑1 (MQ=255) ggAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAGGAAAGAGAGCCAg < 1:16007005/68‑1 (MQ=255) ggAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAGGAAAGAGAGCCAg < 1:16734599/68‑1 (MQ=255) ggAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAGGAAAGAGAGCCAg < 1:29415166/68‑1 (MQ=255) ggAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAGGAAAGAGAGCCAg < 1:3265839/68‑1 (MQ=255) | ACATTTACGCGATGAGGCAAGGCCAGGATCCAATACAACAAGATGAGTAACACCCAGTTTGGCCGGAAAACAATCAGGTTATCCGGCCAGGGCATGATTTGCAGCAACAGCGCAATGAGGAAAGAGAGCCAG > CP009273/3392068‑3392199 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |