| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 904473 = | 163 (0.460) | 10 (0.030) | 5/98 | NT | 5.8% | coding (278/1002 nt) | ltaE | L‑allo‑threonine aldolase, PLP‑dependent |
| ? | CP009273 | 904511 = | 182 (0.590) | coding (240/1002 nt) | ltaE | L‑allo‑threonine aldolase, PLP‑dependent | |||||
CACTGCGAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/904546‑904473‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGT > CP009273/904511‑904576 CACTGCGAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGG < 1:28284151/68‑1 ACTGCGAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGC < 1:17910164/68‑1 ACTGCGAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGC < 1:28777484/68‑1 GCGAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCG < 1:25215461/68‑1 GCGAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCG < 1:3880129/68‑1 GCGAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCG < 1:5658317/68‑1 GCGAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTCTGAAGCCGGTGGCGCG < 1:22577111/68‑1 GCGAACGCGGCGAAGAGTATA‑ATGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCG < 1:11095226/68‑1 CGAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCG > 1:12057952/1‑67 CGAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCG > 1:19793310/1‑67 CGAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCG > 1:19883265/1‑67 CGAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCG > 1:20065858/1‑67 CGAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCG > 1:9920837/1‑67 GAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGGC < 1:21848915/68‑1 GAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGGC < 1:6491425/68‑1 GAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGGC < 1:4659705/68‑1 GAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGGC < 1:18837613/68‑1 GAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGGC < 1:6869976/68‑1 GAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGG < 1:26453264/67‑1 GAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGG < 1:15419235/67‑1 GAACGCGGCGAAGAGTAGA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGGC < 1:8382601/68‑1 CGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGGCCTGACCG < 1:27994179/67‑1 CGAAGAGTATA‑TTGTCGGGCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGGCCTGACCG < 1:7679182/67‑1 GAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGGCCTGACCGAC < 1:8417964/68‑1 GAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGGCCTGACCGAC < 1:2128729/68‑1 GAAGACTAAA‑CTGGCGGGCAGGCCGCGCATAACTATCTGTTTGAAGCCGGGGGCGCGGCCTGACCGAC < 1:5359982/68‑1 AGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGGCCTGACCGACAA < 1:11596298/68‑1 AGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGGCCTGACCGACAA < 1:23269776/68‑1 GTATATTTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGGCCTGACCGACAA < 1:11684588/66‑1 ATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGGCCTGACCGACAATATAC < 1:29011487/68‑1 GCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTC > 1:3526435/1‑68 GCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGG > 1:13968183/1‑66 GCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGG > 1:9898270/1‑66 GCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGG > 1:10633949/1‑66 GCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGG > 1:11731121/1‑66 GCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGG > 1:1113832/1‑66 GCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGG > 1:24416781/1‑66 CGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGG > 1:24471237/1‑65 GCGGCCTGACCGACAATATACTGTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:5089327/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGCGCGACCAGGTTGGCCTG > 1:1068117/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:9967783/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:9365697/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:10206713/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:28512413/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:765809/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:4283134/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:4498028/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:9945339/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:8681743/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:491241/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:8844955/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:9015655/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:9230405/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:971247/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:5721028/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:10580169/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:14979355/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:14938851/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:14784905/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:17297317/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:27487578/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:14028790/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:14019840/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:13955324/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:20424380/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:11790859/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:21269044/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:22840467/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:11643464/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:23734855/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:2385059/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:24351420/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:24938990/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:2560241/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:25777934/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:26753480/1‑68 GCGGCCTGACCGACAATATACTCTTCGCCGCATTCGCAGTGACTGAGAAGAGCGACCAGGTTGGCCTt > 1:25383057/1‑67 GCGGCCTGACCGACAATATACTCTTCGACGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTG > 1:5054811/1‑68 GCGGCCTGACCGACAATATACACTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGCCCAGGTTGGCCTG > 1:7476455/1‑68 GGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGA < 1:15005106/67‑1 CCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGT > 1:8452787/1‑67 CCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGT > 1:8478129/1‑67 CCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGT > 1:14998562/1‑67 CCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGT < 1:15452056/67‑1 CCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGT > 1:18055749/1‑67 CCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGT < 1:19875287/67‑1 CCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGT > 1:9550907/1‑67 CCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGT > 1:19939438/1‑67 CCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGT < 1:97284/67‑1 CCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGT < 1:129586/67‑1 CCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGT > 1:20853687/1‑67 CCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGT < 1:23612728/67‑1 CCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGT > 1:26923294/1‑67 CACTGCGAACGCGGCGAAGAGTATA‑TTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/904546‑904473‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGT > CP009273/904511‑904576 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |