| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 904473 = | 163 (0.460) | 10 (0.030) | 5/98 | NT | 5.8% | coding (278/1002 nt) | ltaE | L‑allo‑threonine aldolase, PLP‑dependent |
| ? | CP009273 | 904511 = | 182 (0.590) | coding (240/1002 nt) | ltaE | L‑allo‑threonine aldolase, PLP‑dependent | |||||
Only 100 of 341 total aligned reads displayed.
GGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTG > CP009273/904446‑904577 | ggTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg > 1:10058640/1‑68 (MQ=255)ggTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg > 1:7328747/1‑68 (MQ=255)ggTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg > 1:21459350/1‑68 (MQ=255) gTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg > 1:4649144/1‑67 (MQ=255) gTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg > 1:2308679/1‑67 (MQ=255) tGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCTAACAGATAGTTATGCGCGGCCTGAc < 1:20212624/67‑1 (MQ=255) gCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCg > 1:19485770/1‑68 (MQ=255) cgaagagtatattgtcgggcaggccgcgcataactatctgtttgaagccggtggcgcggcCTGACCg < 1:7679182‑M2/7‑1 (MQ=255) ggTTGATTACTGCCCAGCACCGCCGCGGCACCGGCTTCAAACAGATATTTTTGCGCGGGCTGCCCGAc > 1:14487275/1‑68 (MQ=255) ggTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGCCCGAc > 1:1516006/1‑68 (MQ=255) ggTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGAc < 1:127606/68‑1 (MQ=255) gaagactaaactggcgggcaggccgcgcataactatctgtttgaagccgggggcgcggcCTGACCGAc < 1:5359982‑M2/9‑1 (MQ=255) gTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACa > 1:11803162/1‑68 (MQ=255) gtatatttgtcggtcaggccgcgcataactatctgtttgaagccggtggcgcggcCTGACCGACaa < 1:11684588‑M2/11‑1 (MQ=255) aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGCCCGACAATATAc > 1:24421075/1‑67 (MQ=255) aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAatatcc > 1:25041339/1‑65 (MQ=255) aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc > 1:29076605/1‑67 (MQ=255) aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc > 1:26779297/1‑67 (MQ=255) aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc > 1:9178276/1‑67 (MQ=255) aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc > 1:546554/1‑67 (MQ=255) aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc > 1:12478591/1‑67 (MQ=255) aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc > 1:7877740/1‑67 (MQ=255) aCTGCCCAGCACCGCCGCGCCACCGGATTCAAACAGATAGTTATGCGCGGCCTGACCGACACTATAc > 1:23333813/1‑67 (MQ=255) tGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATActct < 1:11624976/68‑1 (MQ=255) gCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGCCCGACAATATActct > 1:20941148/1‑67 (MQ=255) gtcggtcagGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTc < 1:2128729‑M1/59‑1 (MQ=255) gtcggtcagGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTc < 1:8417964‑M1/59‑1 (MQ=255) ccAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTc > 1:17895890/1‑67 (MQ=255) ccAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTc > 1:25444325/1‑67 (MQ=255) ccAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTc > 1:18530619/1‑67 (MQ=255) gCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTcgcc > 1:16257687/1‑67 (MQ=255) gCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTcgcc > 1:27308819/1‑67 (MQ=255) gCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTcgcc > 1:13505342/1‑67 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACTGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg > 1:15887017/1‑68 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg > 1:24542023/1‑68 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg > 1:10308611/1‑68 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg < 1:9915477/68‑1 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg < 1:21597118/68‑1 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg > 1:64239/1‑68 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg > 1:4016595/1‑68 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg > 1:24844977/1‑68 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg > 1:3386166/1‑68 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg > 1:26374149/1‑68 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg > 1:28835160/1‑68 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg < 1:20533086/68‑1 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg > 1:14828035/1‑68 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTAACCGACAATATACTCTTCGCcgcg > 1:8672617/1‑68 (MQ=255) gccgcGCCACCGGCTTCACACAGATAGTGATGCGCGGCCGGGCCGACAAGATACTCTTCGCCGCGTTc > 1:27870180/1‑68 (MQ=255) CGCGCCACCGGCTTCAGACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGc < 1:22577111‑M1/68‑1 (MQ=255) CGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACATTATACTCTTCGCCGCGTTCGc < 1:11095226‑M1/68‑1 (MQ=255) CGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCg > 1:19793310‑M1/1‑67 (MQ=255) CGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCg > 1:19883265‑M1/1‑67 (MQ=255) CGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGc < 1:25215461‑M1/68‑1 (MQ=255) cACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTg < 1:2557737/67‑1 (MQ=255) aaCAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGc < 1:23502342/68‑1 (MQ=255) aCAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCg > 1:14640151/1‑68 (MQ=255) aCAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCg > 1:383403/1‑68 (MQ=255) aCAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCg > 1:16934827/1‑68 (MQ=255) gATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGAcc > 1:17650320/1‑68 (MQ=255) aTAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCa > 1:13923483/1‑68 (MQ=255) tAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGa < 1:12297952/64‑1 (MQ=255) tAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGa < 1:2293485/64‑1 (MQ=255) tAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAg < 1:7062501/68‑1 (MQ=255) tAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAg < 1:8144758/68‑1 (MQ=255) tAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAg < 1:2079470/68‑1 (MQ=255) tAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAg < 1:6659030/68‑1 (MQ=255) tAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAg < 1:16486606/68‑1 (MQ=255) tAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAg < 1:28422423/68‑1 (MQ=255) tAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAg < 1:28016106/68‑1 (MQ=255) tAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAg < 1:24273107/68‑1 (MQ=255) aGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGCCCAgg > 1:4784636/1‑68 (MQ=255) aGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAgg > 1:8241691/1‑68 (MQ=255) ttATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGtt > 1:16133056/1‑68 (MQ=255) ttATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGtt > 1:11304568/1‑68 (MQ=255) ttATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGtt > 1:7547376/1‑68 (MQ=255) tATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGt < 1:5955796/66‑1 (MQ=255) tATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTg > 1:26585461/1‑68 (MQ=255) aTGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTg > 1:2111236/1‑67 (MQ=255) aTGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTg > 1:18929028/1‑67 (MQ=255) tGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGc < 1:16577450/68‑1 (MQ=255) tGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGc < 1:5665413/68‑1 (MQ=255) gcggcCTGACCGACAATATACTGTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTg > 1:5089327‑M2/6‑68 (MQ=255) gcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGCGCGACCAGGTTGGCCTg > 1:1068117‑M2/6‑68 (MQ=255) gcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTg > 1:14019840‑M2/6‑68 (MQ=255) gcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTg > 1:491241‑M2/6‑68 (MQ=255) gcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTg > 1:14979355‑M2/6‑68 (MQ=255) gcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTg > 1:2385059‑M2/6‑68 (MQ=255) gcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTg > 1:9365697‑M2/6‑68 (MQ=255) gcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTg > 1:27487578‑M2/6‑68 (MQ=255) gcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTg > 1:17297317‑M2/6‑68 (MQ=255) gcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTg > 1:8844955‑M2/6‑68 (MQ=255) gcggcCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTg > 1:20424380‑M2/6‑68 (MQ=255) gcggcCTGACCGACAATATACTCTTCGACGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTg > 1:5054811‑M2/6‑68 (MQ=255) cCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGt > 1:18055749‑M2/2‑67 (MQ=255) cCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGt < 1:97284‑M2/66‑1 (MQ=255) cCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGt > 1:8478129‑M2/2‑67 (MQ=255) cCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGt < 1:15452056‑M2/66‑1 (MQ=255) cCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGt < 1:23612728‑M2/66‑1 (MQ=255) cCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGt > 1:19939438‑M2/2‑67 (MQ=255) cTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTg > 1:13061857/1‑67 (MQ=255) | GGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTCGCAGTGACTGAGCAGAGCGACCAGGTTGGCCTGAGTG > CP009273/904446‑904577 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |