| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 904473 = | 163 (0.460) | 10 (0.030) | 5/98 | NT | 5.8% | coding (278/1002 nt) | ltaE | L‑allo‑threonine aldolase, PLP‑dependent |
| ? | CP009273 | 904511 = | 182 (0.590) | coding (240/1002 nt) | ltaE | L‑allo‑threonine aldolase, PLP‑dependent | |||||
Only 100 of 314 total aligned reads displayed.
TTATCCAGCGGTAGCGTGCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTC > CP009273/904407‑904540 | actcaggccaacctggtcgctctgctcagtcactgcgaacgcggcgaagagtatattgtcggtcagg < 1:23612728‑M1/1‑1 (MQ=255) tcaggccaacctggtcgctctgctcagtcactgcgaacgcggcgaagagtatattgtcggtcagGcc < 1:15005106‑M1/3‑1 (MQ=255) aTCCAGCGGTAGCGTGCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCAccgcc > 1:26192130/1‑67 (MQ=255) aTCCAGCGGTAGCGTGCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCAccgcc > 1:12824211/1‑67 (MQ=255) caggccaacctggtcgctctgctcagtcactgcgaacgcgtcgaagagtatattgtcggtcagGCcgc > 1:5054811‑M1/64‑68 (MQ=255) caggccaacctggtcgctctgctcagtcactgcgaacgcggcgaagagtatattgtcggtcagGCcgc > 1:5721028‑M1/64‑68 (MQ=255) caggccaacctggtcgctctgctcagtcactgcgaacgcggcgaagagtatattgtcggtcagGCcgc > 1:491241‑M1/64‑68 (MQ=255) caggccaacctggtcgctctgctcagtcactgcgaacgcggcgaagagtatattgtcggtcagGCcgc > 1:14938851‑M1/64‑68 (MQ=255) caggccaacctggtcgctctgctcagtcactgcgaacgcggcgaagagtatattgtcggtcagGCcgc > 1:14784905‑M1/64‑68 (MQ=255) caggccaacctggtcgctctgctcagtcactgcgaacgcggcgaagagtatattgtcggtcagGCcgc > 1:4283134‑M1/64‑68 (MQ=255) caggccaacctggtcgctctgctcagtcactgcgaacgcggcgaagagtatattgtcggtcagGCcgc > 1:14028790‑M1/64‑68 (MQ=255) caggccaacctggtcgctctgctcagtcactgcgaacgcggcgaagagtatattgtcggtcagGCcgc > 1:765809‑M1/64‑68 (MQ=255) caggccaacctggtcgctctgctcagtcactgcgaacgcggcgaagagtatattgtcggtcagGCcgc > 1:28512413‑M1/64‑68 (MQ=255) caggccaacctggtcgctctgctcagtcactgcgaacgcggcgaagagtatattgtcggtcagGCcgc > 1:8681743‑M1/64‑68 (MQ=255) caggccaacctggtcgctctgctcagtcactgcgaacgcggcgaagagtatattgtcggtcagGCcgc > 1:9230405‑M1/64‑68 (MQ=255) caggccaacctggtcgctctgctcagtcactgcgaacgcggcgaagagtatattgtcggtcagGCcgc > 1:20424380‑M1/64‑68 (MQ=255) caggccaacctggtcgctctgctcagtcactgcgaacgcggcgaagagtatattgtcggtcagGCcgc > 1:2560241‑M1/64‑68 (MQ=255) caggccaacctggtcgctctgctcagtcactgcgaacgcggcgaagagtatattgtcggtcagGCcgc > 1:22840467‑M1/64‑68 (MQ=255) caggccaacctggtcgctctgctcagtcactgcgaacgcggcgaagagtatattgtcggtcagGCcgc > 1:971247‑M1/64‑68 (MQ=255) caggccaacctgggcgctctgctcagtcactgcgaacgcggcgaagtgtatattgtcggtcagGCcgc > 1:7476455‑M1/64‑68 (MQ=255) ccAGCGGTAGCGTGCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACcgccgc > 1:18093202/1‑67 (MQ=255) ccAGCGGTAGCGTGCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACcgccgc > 1:22613173/1‑67 (MQ=255) ccAGCGGTAGCGTGCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACcgccgc > 1:5111270/1‑67 (MQ=255) ccAGCGGTAGCGTGCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACcgccgc > 1:15763427/1‑67 (MQ=255) ccAGCGGTAGCGTGCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACcgccgc > 1:7199115/1‑67 (MQ=255) ccaacctggtcgctctgctcagtcactgcgaacgcggcgaagagtatattgtcggtcagGCCgcgc > 1:10633949‑M1/60‑66 (MQ=255) ccaacctggtcgctctgctcagtcactgcgaacgcggcgaagagtatattgtcggtcagGCCgcgc > 1:1113832‑M1/60‑66 (MQ=255) ccaacctggtcgctctgctcagtcactgcgaacgcggcgaagagtatattgtcggtcagGCCgcgc > 1:11731121‑M1/60‑66 (MQ=255) ggTAGCGTGCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCAcc > 1:834676/1‑68 (MQ=255) ggTAGCGTGCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCAcc > 1:21508341/1‑68 (MQ=255) aGCGTGCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGc < 1:10801641/68‑1 (MQ=255) cGTGCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCt > 1:8167791/1‑67 (MQ=255) cGTGCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCt > 1:25036801/1‑67 (MQ=255) cGTGCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCt > 1:2698604/1‑67 (MQ=255) cGTGCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCt > 1:3882047/1‑67 (MQ=255) cGTGCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCt > 1:17058422/1‑67 (MQ=255) gCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCGCCGGCTTCaa > 1:9501939/1‑68 (MQ=255) gCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCaa > 1:27992787/1‑68 (MQ=255) cGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCCCCGCCGCGCCACCGGCTTCAAAc > 1:19906219/1‑68 (MQ=255) cGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCaaa < 1:23387075/67‑1 (MQ=255) cGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAAc > 1:23860354/1‑68 (MQ=255) gCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGGTTCAAACAGATAGtt > 1:6984596/1‑68 (MQ=255) gCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGtt > 1:20482530/1‑68 (MQ=255) gCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGtt > 1:15190232/1‑68 (MQ=255) gCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGtt > 1:15444412/1‑68 (MQ=255) gCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCCGCTTCAAACAGATAGtt > 1:21262563/1‑68 (MQ=255) cgcgTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGt < 1:2639085/65‑1 (MQ=255) cTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGt < 1:10262170/60‑1 (MQ=255) aTGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGc < 1:27212817/68‑1 (MQ=255) gggTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCgg > 1:328357/1‑65 (MQ=255) gggTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCgg > 1:1379943/1‑65 (MQ=255) gggTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCgg > 1:20086975/1‑65 (MQ=255) gggTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCgg > 1:9080159/1‑65 (MQ=255) ggTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg > 1:16243168/1‑68 (MQ=255) ggTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg > 1:12384963/1‑68 (MQ=255) ggTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg > 1:8148426/1‑68 (MQ=255) ggTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg > 1:10058640/1‑68 (MQ=255) ggTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg > 1:7328747/1‑68 (MQ=255) gTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg > 1:11807867/1‑67 (MQ=255) gTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg > 1:13488387/1‑67 (MQ=255) gTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg > 1:4649144/1‑67 (MQ=255) gTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTg > 1:844854/1‑67 (MQ=255) gCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCg > 1:19485770/1‑68 (MQ=255) ggTTGATTACTGCCCAGCACCGCCGCGGCACCGGCTTCAAACAGATATTTTTGCGCGGGCTGCCCGAc > 1:14487275/1‑68 (MQ=255) ggTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGAc > 1:24992447/1‑68 (MQ=255) ggTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGAc < 1:13626551/68‑1 (MQ=255) tGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACaa < 1:23085158/67‑1 (MQ=255) gtatattgtcggtcagGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAatat < 1:29011487‑M1/52‑1 (MQ=255) aTACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAatat > 1:2143065/1‑67 (MQ=255) aTACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAatat > 1:12524061/1‑67 (MQ=255) tACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTTACGGACAatat > 1:6541899/1‑66 (MQ=255) tACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAatat > 1:20780584/1‑66 (MQ=255) aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACTGATAGTTATGCGCGGCCTGACCGACAATATAc > 1:18563056/1‑67 (MQ=255) aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGCCCGACAATATAc > 1:24421075/1‑67 (MQ=255) aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc > 1:16453165/1‑67 (MQ=255) aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc > 1:7877740/1‑67 (MQ=255) aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc > 1:8522020/1‑67 (MQ=255) aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc > 1:16535022/1‑67 (MQ=255) aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc > 1:19812117/1‑67 (MQ=255) aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc > 1:26779297/1‑67 (MQ=255) aCTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATAc > 1:28274296/1‑67 (MQ=255) ttgtcggtcagGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATActct < 1:23269776‑M1/57‑1 (MQ=255) tGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATActct < 1:11624976/68‑1 (MQ=255) gCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGCCCGACAATATActct > 1:20941148/1‑67 (MQ=255) gCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATActct > 1:29196408/1‑67 (MQ=255) ccAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTc > 1:17895890/1‑67 (MQ=255) ccAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTc > 1:6042941/1‑67 (MQ=255) ccAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTc > 1:1596341/1‑67 (MQ=255) ccAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTc > 1:19061756/1‑67 (MQ=255) ccAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTc > 1:27714839/1‑67 (MQ=255) aGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTcgcc > 1:12238041/1‑68 (MQ=255) gCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGCCAATATACTCTTcgcc > 1:17619336/1‑67 (MQ=255) gCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTcgcc > 1:25149895/1‑67 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg < 1:9915477/68‑1 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg > 1:8875743/1‑68 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg > 1:5393258/1‑68 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg > 1:4820067/1‑68 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg > 1:24844977/1‑68 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg > 1:24542023/1‑68 (MQ=255) aCCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCcgcg > 1:24081523/1‑68 (MQ=255) | TTATCCAGCGGTAGCGTGCCGTCGGCAGCCGCGTCTATGGGTTGCGGTTGAATACTGCCCAGCACCGCCGCGCCACCGGCTTCAAACAGATAGTTATGCGCGGCCTGACCGACAATATACTCTTCGCCGCGTTC > CP009273/904407‑904540 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |