New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	1433166 =	190 (0.540)	10 (0.030)	5/96	NT	5.3%	coding (1876/3525 nt)	pfo	pyruvate‑flavodoxin oxidoreductase
	?	CP009273	1433229 =	193 (0.640)					coding (1813/3525 nt)	pfo	pyruvate‑flavodoxin oxidoreductase

ACTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/1433240‑1433166 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  >  CP009273/1433229‑1433294                                                                                                                                               ACTGGCAGGCTCTGGCGCTGGCGCGTGATTCCGTTGAAGAAGTTCCGTTGCAACCGGTAAATCCGCAC                                                                           >  1:1326522/1‑68 ACTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCAC                                                                           >  1:1363379/1‑68 ACTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCAC                                                                           >  1:25860344/1‑68 ACTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCAC                                                                           >  1:11878725/1‑68   TGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAG                                                                         <  1:3355340/68‑1    GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:18994900/68‑1    GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:17953248/68‑1    GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:3992020/68‑1    GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:18045310/68‑1    GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:3951880/68‑1    GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:10399225/68‑1    GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:18994910/68‑1    GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:29240991/68‑1    GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        >  1:10074437/1‑68    GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:26476902/68‑1    GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:25681037/68‑1    GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:22107189/68‑1    GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:24503714/68‑1    GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:10400763/68‑1    GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:13693497/68‑1    GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:11006697/68‑1    GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:11008778/68‑1    GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:11039936/68‑1    GGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGGTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:15763277/68‑1    GGCAGACTCTGGCGCTGGCGCGTGAATCCGTAGCAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGC                                                                        <  1:25358262/68‑1     GCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:5845436/68‑1      CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACCGCG                                                                       >  1:108716/1‑67      CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:8131037/67‑1      CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:24513259/67‑1      CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:11418589/67‑1      CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:19909101/67‑1      CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:2653734/67‑1      CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:21387469/1‑67      CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:21503426/67‑1      CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:8914251/67‑1      CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:599182/1‑67      CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:16796955/67‑1      CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:6464282/67‑1      CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:16584736/67‑1      CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:6495456/67‑1      CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       <  1:7041754/67‑1      CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:15956871/1‑67      CAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCG                                                                       >  1:7196097/1‑67       AGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCC                                                                     >  1:17548196/1‑68        GGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCA                                                                    >  1:786314/1‑68          CTCTGGCGCTGGCGCGTGGATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCC                                                                     <  1:19393762/65‑1          CTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCC                                                                     <  1:28915279/65‑1          CTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCC                                                                     <  1:15720816/65‑1           TCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGA                                                                  <  1:7395558/67‑1                CGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTG                                                             <  1:15124108/67‑1                CGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTG                                                             <  1:9508855/67‑1                CGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTG                                                             <  1:11514593/67‑1                CGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTG                                                             <  1:14769091/67‑1                         GTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTGCCAGTTGCG                                                    <  1:21095248/67‑1                         GTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTGCCAGTTGCG                                                    <  1:12964857/67‑1                         GTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGAAAATCCGCACAGCGCCAGAGCCTGCCAGTTGCG                                                    <  1:330596/67‑1                           GAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTGCCAGTTGCGTT                                                  <  1:18653122/67‑1                              TCCGAAGAAGAAGTGCCGTTGCACCCGGTAAATCCGCACAGCGCCAGAGCCTGCCAGTTGCGTTCCAC                                              <  1:26508535/68‑1                               CCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAGAGCCTGCCAGTTGCGTTCCACC                                             <  1:21237117/68‑1                                                                   ACAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATC         >  1:13941824/1‑68                                                                    CAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATC         >  1:20991177/1‑67                                                                      GCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGC       >  1:22579324/1‑67                                                                        GCCAGAGCCTGCCAGTTTCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:16558081/68‑1                                                                        GCCAGAGCCTGCCAGTTGCGTTCCCCCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAC     >  1:18033733/1‑67                                                                        GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:15806659/68‑1                                                                        GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:10699975/68‑1                                                                        GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:17844483/68‑1                                                                        GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:9991287/68‑1                                                                        GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACC    <  1:16719417/68‑1                                                                        GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAC     >  1:4974195/1‑67                                                                        GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAC     >  1:6657415/1‑67                                                                        GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAC     >  1:23616388/1‑67                                                                        GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAC     >  1:28087760/1‑67                                                                        GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAC     >  1:11906090/1‑67                                                                        GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAC     >  1:21723804/1‑67                                                                        GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAC     >  1:2512130/1‑67                                                                        GCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGC       <  1:28102261/65‑1                                                                          CAGAGCGTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGGAATCGCACCCT  <  1:23147239/68‑1                                                                          CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCACTCGCACCCT  <  1:5590803/68‑1                                                                          CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:17471851/68‑1                                                                          CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:16526542/68‑1                                                                          CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:18378908/68‑1                                                                          CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:20975272/68‑1                                                                          CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:8026090/68‑1                                                                          CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:27801496/68‑1                                                                          CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:26196185/68‑1                                                                          CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:10614448/68‑1                                                                          CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  <  1:21734895/68‑1                                                                          CAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAC     >  1:20724660/1‑65                                                                                                                                               ACTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/1433240‑1433166 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT  >  CP009273/1433229‑1433294

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.