| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1433166 = | 190 (0.540) | 10 (0.030) | 5/96 | NT | 5.3% | coding (1876/3525 nt) | pfo | pyruvate‑flavodoxin oxidoreductase |
| ? | CP009273 | 1433229 = | 193 (0.640) | coding (1813/3525 nt) | pfo | pyruvate‑flavodoxin oxidoreductase | |||||
Only 100 of 306 total aligned reads displayed.
TTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT > CP009273/1433165‑1433294 | TGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGcc > 1:786314‑M1/1‑68 (MQ=255) GGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCagag < 1:15720816‑M1/65‑1 (MQ=255) GGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCagag < 1:28915279‑M1/65‑1 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg > 1:21387469‑M1/1‑67 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg > 1:7196097‑M1/1‑67 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg < 1:8131037‑M1/67‑1 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg > 1:15956871‑M1/1‑67 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg < 1:11418589‑M1/67‑1 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg < 1:2653734‑M1/67‑1 (MQ=255) CGCGGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg > 1:108716‑M1/1‑67 (MQ=255) GCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGcc < 1:17953248‑M1/68‑1 (MQ=255) GCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGcc < 1:18994900‑M1/68‑1 (MQ=255) GCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGcc < 1:29240991‑M1/68‑1 (MQ=255) GCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGcc < 1:25681037‑M1/68‑1 (MQ=255) GCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGcc < 1:3992020‑M1/68‑1 (MQ=255) GCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGcc < 1:24503714‑M1/68‑1 (MQ=255) GCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGcc > 1:10074437‑M1/1‑68 (MQ=255) GCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGcc < 1:11006697‑M1/68‑1 (MQ=255) CTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCa < 1:3355340‑M1/68‑1 (MQ=255) GTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGt > 1:11878725‑M1/1‑68 (MQ=255) GTGCGGATTTACCGGTTGCAACGGAACTTCTTCAACGGAATCACGCGCCAGCGCCAGAGCCTGCCAGt > 1:1326522‑M1/1‑68 (MQ=255) gtgaatccgtagaagaagttccgttgcaaccggtaaatccgcacagcgccaGAGCCTGCCAGTTGCg < 1:21095248‑M2/16‑1 (MQ=255) gtgaatccgtagaagaagttccgttgcaaccggtaaatccgcacagcgccaGAGCCTGCCAGTTGCg < 1:12964857‑M2/16‑1 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGGTTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:5195799/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:9470026/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:21764079/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:23579996/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:10435903/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:20092386/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:11294513/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:17556779/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:3042235/1‑67 (MQ=255) gaatccgtagaagaagttccgttgcaaccggtaaatccgcacagcgccaGAGCCTGCCAGTTGCGtt < 1:18653122‑M2/18‑1 (MQ=255) ttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcc < 1:22678413/68‑1 (MQ=255) ttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcc < 1:26742865/68‑1 (MQ=255) ttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcc < 1:17030464/68‑1 (MQ=255) ttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcc < 1:11213440/68‑1 (MQ=255) ttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcc < 1:8854290/68‑1 (MQ=255) ttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcc < 1:19696115/68‑1 (MQ=255) ttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcc < 1:12231233/68‑1 (MQ=255) tACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcca < 1:1730327/68‑1 (MQ=255) tACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcca < 1:13457144/68‑1 (MQ=255) tACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcc > 1:19403376/1‑67 (MQ=255) tACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGACTGCCAGTTGCGTTcca < 1:3618082/68‑1 (MQ=255) aCCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTccac < 1:4776801/68‑1 (MQ=255) aCCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTccac < 1:9594177/68‑1 (MQ=255) aCCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTccac < 1:5762877/68‑1 (MQ=255) ccGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTccacc > 1:6995539/1‑68 (MQ=255) cGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTccacca > 1:2163164/1‑68 (MQ=255) cGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTccacca > 1:15152221/1‑68 (MQ=255) cGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTccacca > 1:492721/1‑68 (MQ=255) cGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTccacca > 1:23005446/1‑68 (MQ=255) cGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTccacca > 1:7350616/1‑68 (MQ=255) ggTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCATAGCCTGCCAGTTGCGTTCCACCAg < 1:25138395/68‑1 (MQ=255) gTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGa > 1:554056/1‑68 (MQ=255) ttGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGa < 1:12537269/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:12621831/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:22397461/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:9100769/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:19086927/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:14708616/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:6822515/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt > 1:24109065/1‑67 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:7544315/67‑1 (MQ=255) cGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGc < 1:270381/68‑1 (MQ=255) cGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGc < 1:4426430/68‑1 (MQ=255) ggAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTgg > 1:16476292/1‑66 (MQ=255) ggAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGcc < 1:426352/68‑1 (MQ=255) aCTTCATCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCttt < 1:24647692/68‑1 (MQ=255) tcttctACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCt < 1:21855251/68‑1 (MQ=255) tcttctACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCt > 1:16079030/1‑68 (MQ=255) cttctACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTa < 1:8630147/68‑1 (MQ=255) ttctACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCt > 1:3169004/1‑66 (MQ=255) ttctACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTAc < 1:14972817/68‑1 (MQ=255) tctACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCt > 1:25851413/1‑65 (MQ=255) tACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGt > 1:10317069/1‑68 (MQ=255) tACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGt > 1:6287638/1‑68 (MQ=255) aCGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTa > 1:11541148/1‑68 (MQ=255) aCGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTa > 1:13624144/1‑68 (MQ=255) aCGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTa > 1:20491269/1‑68 (MQ=255) cGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTa > 1:27329110/1‑67 (MQ=255) cGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTa > 1:23637057/1‑67 (MQ=255) ggATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAAc < 1:20692431/68‑1 (MQ=255) ggATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAAc < 1:20280752/68‑1 (MQ=255) cgcgCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGc > 1:386294/1‑68 (MQ=255) gcgccagcgccaGAGCCTGCCAGTTGCGTTCCACGAGCTCCTGGCCTTTGCTACTGTAACTTTTGGCa > 1:20914250/1‑68 (MQ=255) gcgccagcgccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCa < 1:23424499/68‑1 (MQ=255) gccagcgccagAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCaa < 1:26463209/67‑1 (MQ=255) ccagcgccagAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATc > 1:5874331/1‑68 (MQ=255) acagcgccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATc > 1:13941824‑M2/10‑68 (MQ=255) gccaGAGCCTGCCAGTTTCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAcc < 1:16558081‑M2/64‑1 (MQ=255) gccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGc < 1:28102261‑M2/61‑1 (MQ=255) gccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAcc < 1:17844483‑M2/64‑1 (MQ=255) gccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAcc < 1:15806659‑M2/64‑1 (MQ=255) gccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAcc < 1:16719417‑M2/64‑1 (MQ=255) gccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAc > 1:6657415‑M2/5‑67 (MQ=255) caGAGCGTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGGAATCGCACCCt < 1:23147239‑M2/66‑1 (MQ=255) caGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCt < 1:8026090‑M2/66‑1 (MQ=255) caGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCt < 1:18378908‑M2/66‑1 (MQ=255) caGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCt < 1:27801496‑M2/66‑1 (MQ=255) | TTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT > CP009273/1433165‑1433294 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |