| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1433166 = | 190 (0.540) | 10 (0.030) | 5/96 | NT | 5.3% | coding (1876/3525 nt) | pfo | pyruvate‑flavodoxin oxidoreductase |
| ? | CP009273 | 1433229 = | 193 (0.640) | coding (1813/3525 nt) | pfo | pyruvate‑flavodoxin oxidoreductase | |||||
Only 100 of 253 total aligned reads displayed.
CGAGCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCC > CP009273/1433100‑1433233 | cGAGCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTg > 1:8797523/1‑68 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:20975272‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:18378908‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:27801496‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:21734895‑M1/2‑1 (MQ=255)agggtgcgattcccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcacgctcTg < 1:23147239‑M1/2‑1 (MQ=255)agggtgcgagtgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:5590803‑M1/2‑1 (MQ=255) ggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc < 1:16719417‑M1/4‑1 (MQ=255) ggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc < 1:10699975‑M1/4‑1 (MQ=255) ggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgaaactggcaggctcTGgc < 1:16558081‑M1/4‑1 (MQ=255) gtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc > 1:11906090‑M1/64‑67 (MQ=255) gtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc > 1:6657415‑M1/64‑67 (MQ=255) gtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc > 1:4974195‑M1/64‑67 (MQ=255) gCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGgc < 1:11477969/67‑1 (MQ=255) gCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGgc < 1:7165430/67‑1 (MQ=255) gCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGgc < 1:19951368/67‑1 (MQ=255) gCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGgc < 1:21350762/67‑1 (MQ=255) gCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGgc < 1:3841702/67‑1 (MQ=255) gcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgcgc > 1:22579324‑M1/62‑67 (MQ=255) gcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc < 1:28102261‑M1/4‑1 (MQ=255) aTCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGgc > 1:27384025/1‑65 (MQ=255) tCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtg < 1:29249841/68‑1 (MQ=255) cGCAGGGGTTACGGTTTTCAGGAAATGTGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:22072730/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCTGAAACCACTGGCGGTCGATTGGCGCtgt < 1:22941584/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:18212546/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:14082657/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:4579646/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:5936019/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:24449721/68‑1 (MQ=255) gCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgtg < 1:21497799/68‑1 (MQ=255) gCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt > 1:24070744/1‑67 (MQ=255) gCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCgg > 1:25262718/1‑68 (MQ=255) gCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCgg > 1:10776179/1‑68 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCg < 1:3980545/65‑1 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGa < 1:11279441/67‑1 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGa < 1:15659813/67‑1 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGAt > 1:21009778/1‑68 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGAt > 1:15223819/1‑68 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGAt > 1:6985236/1‑68 (MQ=255) ggTAACGGTGTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCCCTGTGCGGa < 1:16416654/67‑1 (MQ=255) ttACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGAttt > 1:23308308/1‑68 (MQ=255) tACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGAttt > 1:24239417/1‑67 (MQ=255) ggTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCg > 1:24766180/1‑68 (MQ=255) ttttCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGt > 1:25177811/1‑68 (MQ=255) ttttCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGt > 1:9778444/1‑68 (MQ=255) atttCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCCATTGGCGCTGTGCGGATTTACCGGt > 1:27642246/2‑68 (MQ=255) cACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCa < 1:7904656/68‑1 (MQ=255) cGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTATCGGTTGCAAc > 1:28940723/1‑68 (MQ=255) cGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAAc > 1:17547314/1‑68 (MQ=255) aTCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGaa < 1:10051801/68‑1 (MQ=255) cAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAAct < 1:21978001/68‑1 (MQ=255) gggCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtct > 1:13721464/1‑68 (MQ=255) gggCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtct > 1:20653180/1‑68 (MQ=255) gggCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtct > 1:2681701/1‑68 (MQ=255) gggCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtct > 1:18769562/1‑68 (MQ=255) ggcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtct < 1:12324963/67‑1 (MQ=255) ggcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtct < 1:18443081/67‑1 (MQ=255) ggcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActt < 1:26285947/65‑1 (MQ=255) ggcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActt < 1:17936983/65‑1 (MQ=255) gcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtctt < 1:6452665/67‑1 (MQ=255) gcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtctt < 1:16146567/67‑1 (MQ=255) gcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtct > 1:20695336/1‑66 (MQ=255) gcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtct > 1:18155979/1‑66 (MQ=255) gcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtct > 1:19490138/1‑66 (MQ=255) gcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtct > 1:25909889/1‑66 (MQ=255) cggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACttcttc < 1:337575/67‑1 (MQ=255) ggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTtcttct > 1:17727342/1‑67 (MQ=255) ggtggaacgcaactggcaggctcTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACgg < 1:21237117‑M1/45‑1 (MQ=255) aTCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACgg < 1:14518608/68‑1 (MQ=255) gtggaacgcaactggcaggctcTGGCGCTGTGCGGATTTACCGGGTGCAACGGCACTTCTTCTTCGGa < 1:26508535‑M1/46‑1 (MQ=255) aaaCCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTc < 1:17825398/67‑1 (MQ=255) aaaCCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTc > 1:12692222/1‑67 (MQ=255) aaCCACTGGCGGGCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAc < 1:11500305/68‑1 (MQ=255) cgcaactggcaggctcTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAc < 1:12964857‑M1/51‑1 (MQ=255) aCCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAc > 1:27543899/1‑67 (MQ=255) aCCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAc > 1:13214908/1‑67 (MQ=255) aCCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAc > 1:6287787/1‑67 (MQ=255) ccACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAcgc > 1:6832905/1‑68 (MQ=255) ccACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAcgc > 1:2545950/1‑68 (MQ=255) ccACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACCGATTCAcgc > 1:4771821/1‑68 (MQ=255) cACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAcgcg < 1:14800831/68‑1 (MQ=255) aCTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAcgcg > 1:929758/1‑67 (MQ=255) ggCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgcca > 1:10501921/1‑67 (MQ=255) ggCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgcca > 1:3219438/1‑67 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc < 1:9545650/67‑1 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc < 1:17162826/67‑1 (MQ=255) cGGTCGATTGGCGCGGGGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc < 1:15913518/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcgc < 1:14888129/68‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:12511691/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:1914422/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:23424131/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:11020398/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:8034447/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:2510775/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:26174499/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:14336751/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:13452263/67‑1 (MQ=255) ggTCGATTGGCGCTGGGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:28284186/67‑1 (MQ=255) caggctcTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:15124108‑M1/60‑1 (MQ=255) TGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGcc > 1:786314‑M1/1‑68 (MQ=255) | CGAGCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCC > CP009273/1433100‑1433233 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |