| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1821389 | 237 (0.670) | 12 (0.040) | 8/94 | NT | 5.9% | coding (1128/1344 nt) | astB | succinylarginine dihydrolase |
| ? | CP009273 | = 1821423 | 181 (0.610) | coding (1094/1344 nt) | astB | succinylarginine dihydrolase | |||||
Only 100 of 125 total aligned reads displayed.
AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/1821316‑1821389‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggcgtGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA < CP009273/1821423‑1821358 AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCCCCGC > 1:19833629/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:13438270/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:27780130/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:27859585/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:27866644/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:5260865/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:20344993/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:14821270/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:13679756/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:12936863/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:12857316/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:17473952/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:20779422/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:17707031/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:24642350/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC < 1:10708939/67‑1AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:8155249/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATAATCACCGCCGGATTCACCGC > 1:16064279/1‑67 CGATCCCCCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCTTCACCGCCGGATTCACCGCCCG > 1:13799433/1‑68 CGATCCACCCAGTCATTGAGCGCATTACACAGCGTATCGTTCATCGTCACCGCCGGATTCACCGCCCG > 1:5062874/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:5687473/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:17325593/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:263557/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:26439624/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:27283221/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:25369030/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:16513740/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:20154200/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:3002161/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:11546333/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:11195236/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:11155600/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:21579386/1‑68 ATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC > 1:20523719/1‑68 ATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC > 1:19325600/1‑68 ATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC > 1:22239275/1‑68 ATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC > 1:4512316/1‑68 ATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC > 1:1614149/1‑68 ATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC > 1:11364617/1‑68 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCTTCATCACCGCCGGATTCACCGCCCGGC < 1:3073050/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG > 1:9521782/1‑68 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG > 1:18412089/1‑68 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG > 1:27425358/1‑68 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG > 1:14856913/1‑68 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG > 1:22689245/1‑68 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG > 1:10746916/1‑68 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG > 1:22438605/1‑68 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:5574873/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:2496269/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:4466979/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:24319449/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:22601458/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:10032873/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:16721773/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:20595501/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:6058889/67‑1 CCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGT > 1:12646806/1‑68 CATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGGGCCTGCGGT > 1:12775438/1‑68 AGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTGCCTGCGGTTGCGG > 1:6937916/1‑68 AGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTGCCTGCGGTTGCGG > 1:18155435/1‑68 GTATCGTTCATCATCACCGCCGGCTTCACCGCCCGGCGTGCCTGCGGTTGGGGGTGGTATTGACAGAt > 1:14141244/1‑67 ATCACCGCCGGATTCACCGCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGG > 1:5469747/1‑68 TCACCGCCGGATTCACCGCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGGCAGAAGAAGAACGCCGG > 1:4074942/1‑67 GCCGGATTCACCGCCCGGCGTGCCTGCGGTTGCGGGTGGGATTGACAGAAGAAGAACGCCGGGCGGTG > 1:28543499/1‑68 CGGATTCACCGCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAA > 1:17795836/1‑68 CGCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGT > 1:26831375/1‑68 GCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTG > 1:20907389/1‑68 GCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAAGCCGGCGGTG > 1:522917/1‑68 CCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA > 1:704772/1‑68 CCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA > 1:20853792/1‑68 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT < 1:17012556/68‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT < 1:15676004/68‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT < 1:15374480/68‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT < 1:15029254/68‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT < 1:21568895/68‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT < 1:6718053/68‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA < 1:10458945/67‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA < 1:9608360/67‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA < 1:9575595/67‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA < 1:674366/67‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA < 1:28041447/67‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA < 1:19989630/67‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGGGAATCCGGCGGTGA < 1:2636058/67‑1 CCGGCGTGCCGGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA < 1:9518114/67‑1 GGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGA < 1:12617449/68‑1 GGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGA < 1:17169566/68‑1 GGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGA < 1:4478039/68‑1 GGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGA < 1:20081363/68‑1 GGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGA < 1:19230174/68‑1 GGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGA < 1:7305695/68‑1 CGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATG > 1:27251849/1‑68 GTGCCTGGGGTTGCGGGTGGTATTGACAGAAGAAGTACGCCGGGCGGTGAATCCGGCGGTGCTGATGA < 1:6495131/68‑1 GTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA < 1:21880118/68‑1 GTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA < 1:1869838/68‑1 GTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA < 1:18747394/68‑1 GTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA < 1:6284708/68‑1 GTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA > 1:6093031/1‑68 GTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA < 1:26954598/68‑1 GTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA > 1:28384513/1‑68 TGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA > 1:22043746/1‑67 AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/1821316‑1821389‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggcgtGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA < CP009273/1821423‑1821358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |