| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1821389 | 237 (0.670) | 12 (0.040) | 8/94 | NT | 5.9% | coding (1128/1344 nt) | astB | succinylarginine dihydrolase |
| ? | CP009273 | = 1821423 | 181 (0.610) | coding (1094/1344 nt) | astB | succinylarginine dihydrolase | |||||
Only 100 of 278 total aligned reads displayed.
GTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTT > CP009273/1821356‑1821490 | gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc > 1:14533911/1‑68 (MQ=255)gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc > 1:6148095/1‑68 (MQ=255)gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc > 1:9378185/1‑68 (MQ=255)gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc > 1:3162444/1‑68 (MQ=255) tcatcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCac < 1:6284708‑M2/68‑3 (MQ=255) tcatcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCac < 1:26954598‑M2/68‑3 (MQ=255) tcatcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCac > 1:28384513‑M2/1‑66 (MQ=255) tcatcagcaCCGCCGGATTCACCGCCCGGCGTACTTCTTCTGTCAATACCACCCGCAACCCCAGGCac < 1:6495131‑M2/68‑3 (MQ=255) catcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacg > 1:6759612‑M2/1‑65 (MQ=255) catcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacg > 1:27251849‑M2/1‑65 (MQ=255) tcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgcc < 1:12617449‑M2/68‑6 (MQ=255) tcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgcc < 1:20081363‑M2/68‑6 (MQ=255) atcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:21568895‑M2/68‑8 (MQ=255) atcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:15029254‑M2/68‑8 (MQ=255) atcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:15374480‑M2/68‑8 (MQ=255) atcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:15676004‑M2/68‑8 (MQ=255) atcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:17012556‑M2/68‑8 (MQ=255) tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCCGGCacgccgg < 1:9518114‑M2/67‑8 (MQ=255) tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccggg > 1:20853792‑M2/1‑60 (MQ=255) tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:9608360‑M2/67‑8 (MQ=255) tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:19989630‑M2/67‑8 (MQ=255) tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg < 1:17230982‑M2/67‑8 (MQ=255) caCCGCCGGCTTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgggc > 1:522917‑M2/1‑59 (MQ=255) caCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgggc > 1:20907389‑M2/1‑59 (MQ=255) aCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc > 1:10763030/1‑68 (MQ=255) aCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc > 1:11737241/1‑68 (MQ=255) aCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc > 1:25723920/1‑68 (MQ=255) aCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc > 1:4767234/1‑68 (MQ=255) aCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc > 1:18137381/1‑68 (MQ=255) ccgccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCACCCGCAGGCCCGCCGGgcc > 1:23451190/1‑67 (MQ=255) gccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgcc < 1:3972712/68‑1 (MQ=255) gccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgcc < 1:10147728/68‑1 (MQ=255) aTTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCAt > 1:22164110/1‑68 (MQ=255) aTTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCAt > 1:8810671/1‑68 (MQ=255) ttCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgggcggtgaatccg > 1:17795836‑M2/1‑49 (MQ=255) tCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc < 1:19281628/68‑1 (MQ=255) cACCGCCCGGCGTTCTTCTTCTGTCAATCCCACCCGCAACCGCAGGCacgccgggcggtgaatccggc > 1:28543499‑M2/1‑47 (MQ=255) ccGCCCGGCGTTCTTCTTCTGTCAATACCCCCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGcc > 1:15914200/1‑68 (MQ=255) ccGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGcc > 1:458288/1‑68 (MQ=255) cGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCa > 1:5822114/1‑68 (MQ=255) cccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCAt > 1:7513962/1‑67 (MQ=255) ctggCGTTCTTCATCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCACCGCCATTCGCCATGc < 1:23824137/66‑1 (MQ=255) ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc < 1:18571754/68‑1 (MQ=255) ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc < 1:3030962/68‑1 (MQ=255) cGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCt < 1:25881854/68‑1 (MQ=255) cGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCt > 1:797398/1‑68 (MQ=255) cGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTc > 1:12042338/1‑68 (MQ=255) cGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTc > 1:2068587/1‑68 (MQ=255) gTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTc > 1:19665399/1‑67 (MQ=255) gTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTc > 1:25180933/1‑67 (MQ=255) gTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCa < 1:13981915/68‑1 (MQ=255) gTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCa < 1:4428758/68‑1 (MQ=255) tcttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTaa > 1:5019170/1‑68 (MQ=255) tcttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTaa > 1:22740208/1‑68 (MQ=255) ttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTaat > 1:18903916/1‑66 (MQ=255) ttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAAt < 1:5737932/68‑1 (MQ=255) ttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAAt < 1:20394659/68‑1 (MQ=255) ttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAAt < 1:3541042/68‑1 (MQ=255) ttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAAt < 1:13428454/68‑1 (MQ=255) ttctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAAt < 1:6997369/68‑1 (MQ=255) tctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATc > 1:24972535/1‑68 (MQ=255) tctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATc > 1:20990806/1‑68 (MQ=255) tctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATc > 1:10935332/1‑68 (MQ=255) tctGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATc > 1:8446380/1‑68 (MQ=255) tGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCaa > 1:16669856/1‑68 (MQ=255) tGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCaa > 1:28926833/1‑68 (MQ=255) tGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCaa > 1:6891765/1‑68 (MQ=255) tGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCaa > 1:22394668/1‑68 (MQ=255) tCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAg > 1:7250312/1‑68 (MQ=255) tCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAg > 1:15589547/1‑68 (MQ=255) cAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGa < 1:26791696/68‑1 (MQ=255) aaTACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGAc < 1:28058737/68‑1 (MQ=255) aTACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACt < 1:11852828/68‑1 (MQ=255) aTACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACt < 1:3503235/68‑1 (MQ=255) aTACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACt < 1:9177718/68‑1 (MQ=255) tACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtt > 1:29009197/1‑68 (MQ=255) tACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtt > 1:14372011/1‑68 (MQ=255) accaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACttt > 1:3689787/1‑68 (MQ=255) accaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACttt > 1:9134626/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:26312302/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:16720395/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:18224597/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:21895918/1‑68 (MQ=255) ccaccCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACtttt > 1:22624749/1‑68 (MQ=255) accCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAg > 1:24229131/1‑68 (MQ=255) ccGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGt > 1:537760/1‑67 (MQ=255) ccGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGt > 1:336573/1‑67 (MQ=255) ccGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGt > 1:7772290/1‑67 (MQ=255) ccGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACGTTTAGt > 1:10316395/1‑67 (MQ=255) cGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTc < 1:24747294/68‑1 (MQ=255) acccgcAGGCacgccgggcggtgaatccggcggtgatgatgaacgatacgctgtttaatgcgctcaat > 1:12883985‑M2/3‑10 (MQ=255) aaCCGCAGGCACGCCGGGCCGACGCCATTCGCCTTGCTTTCTCGTAAATCAAAGACTTTTAGTTCGCt < 1:27781385/68‑1 (MQ=255) ccGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTaa > 1:12999753/1‑68 (MQ=255) cGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTaa > 1:27607256/1‑67 (MQ=255) cGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAAt < 1:13796959/68‑1 (MQ=255) aGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCgg > 1:23152948/1‑68 (MQ=255) cACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCggg < 1:21279358/66‑1 (MQ=255) cACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCggg < 1:16441632/66‑1 (MQ=255) cACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGtt > 1:28178543/1‑68 (MQ=255) cACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGt < 1:21748119/67‑1 (MQ=255) | GTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTT > CP009273/1821356‑1821490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |