New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 1821389237 (0.670)12 (0.040) 8/94 NT 5.9% coding (1128/1344 nt) astB succinylarginine dihydrolase
?CP009273 = 1821423 181 (0.610)coding (1094/1344 nt) astB succinylarginine dihydrolase

Only 100 of 372 total aligned reads displayed.

CCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCA  >  CP009273/1821322‑1821455
                                                                   |                                                                  
   cccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct                                                                 <  1:23688232/68‑1 (MQ=255)
   cccAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttct                                                                 <  1:22588680/68‑1 (MQ=255)
     cAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttc                                                               <  1:17639448/68‑1 (MQ=255)
        tCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGttcttct                                                              >  1:397818/1‑66 (MQ=255)
         cATTGAGCGAATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACAGCCCGGCGttcttct                                                              >  1:9012326/1‑65 (MQ=255)
          aTTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTgcctgcgggt                                                          >  1:12883985‑M1/1‑58 (MQ=255)
           ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt                                                         <  1:11450802/68‑1 (MQ=255)
           ttGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt                                                         <  1:9152893/68‑1 (MQ=255)
           atGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt                                                         <  1:3570609/67‑1 (MQ=255)
           atGAGCGCATTAAACAGCGTATCGATCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGt                                                         <  1:12724185/67‑1 (MQ=255)
            tGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTc                                                        >  1:14042680/1‑68 (MQ=255)
              aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCaa                                                      >  1:8175845/1‑68 (MQ=255)
              aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCaa                                                      >  1:12313705/1‑68 (MQ=255)
              aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCaa                                                      >  1:11182568/1‑68 (MQ=255)
              aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCaa                                                      >  1:4360424/1‑68 (MQ=255)
              aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCaa                                                      >  1:26297003/1‑68 (MQ=255)
              aGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCaa                                                      >  1:16389616/1‑68 (MQ=255)
                    ttAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATaccac                                                <  1:25461016/68‑1 (MQ=255)
                      aaaCAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCAccc                                              <  1:18863733/68‑1 (MQ=255)
                        aCAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGc                                            >  1:6013280/1‑68 (MQ=255)
                        aCAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGc                                            >  1:25601510/1‑68 (MQ=255)
                        aCAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGc                                            >  1:2621136/1‑68 (MQ=255)
                        aCAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGc                                            >  1:28541320/1‑68 (MQ=255)
                        aCAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTATTCTGTCAATACCACCCGc                                            >  1:28915410/1‑68 (MQ=255)
                         cAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTGTTCTTCTGTCAATACCCCCCGCa                                           >  1:20691080/1‑68 (MQ=255)
                         cAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCa                                           >  1:22895255/1‑68 (MQ=255)
                         cAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCa                                           >  1:5495273/1‑68 (MQ=255)
                         cAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCa                                           >  1:20163664/1‑68 (MQ=255)
                         cAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGCCAATCCCACCCGc                                            >  1:28761103/1‑67 (MQ=255)
                             gTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAAcc                                        >  1:15887503/1‑67 (MQ=255)
                             gTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAAcc                                        >  1:13208230/1‑67 (MQ=255)
                             gTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAAc                                         <  1:5429155/66‑1 (MQ=255)
                               aTCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCa                                     <  1:28375637/68‑1 (MQ=255)
                               aTCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCa                                     >  1:20594372/1‑68 (MQ=255)
                                 cGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAgg                                   <  1:27641210/68‑1 (MQ=255)
                                  gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAgg                                   >  1:15004699/1‑67 (MQ=255)
                                  gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc                                  >  1:28173553/1‑68 (MQ=255)
                                  gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc                                  >  1:9378185/1‑68 (MQ=255)
                                  gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc                                  >  1:10697107/1‑68 (MQ=255)
                                  gTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGc                                  >  1:14533911/1‑68 (MQ=255)
                                    tcatcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCac                                <  1:6284708‑M2/68‑3 (MQ=255)
                                    tcatcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCac                                >  1:6093031‑M2/1‑66 (MQ=255)
                                    tcatcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCa                                 >  1:22043746‑M2/1‑66 (MQ=255)
                                       tcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgcc                             <  1:4478039‑M2/68‑6 (MQ=255)
                                       tcatcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgcc                             <  1:17169566‑M2/68‑6 (MQ=255)
                                          tcaCCGCCGGATTCACCGCCCGGCGTgcctgcggttgcgggtggtattggcagaagaagaacgccgg                           >  1:4074942‑M1/1‑26 (MQ=255)
                                          tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccggg                          >  1:20853792‑M2/1‑60 (MQ=255)
                                          tcaCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg                           <  1:28041447‑M2/67‑8 (MQ=255)
                                           caCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgggc                         >  1:20907389‑M2/1‑59 (MQ=255)
                                            aCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgg                           >  1:622887‑M2/1‑58 (MQ=255)
                                            aCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc                        >  1:25723920/1‑68 (MQ=255)
                                            aCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc                        >  1:15409101/1‑68 (MQ=255)
                                            aCCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc                        >  1:11737241/1‑68 (MQ=255)
                                             ccgccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgcc                        >  1:851007/1‑67 (MQ=255)
                                              cgccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgc                      <  1:22251597/68‑1 (MQ=255)
                                               gccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgcc                     <  1:10234754/68‑1 (MQ=255)
                                               gccgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgcc                     <  1:10147728/68‑1 (MQ=255)
                                                 cgGATTCACCGGCCGGCGTTGTTCTTCTGTCATTACCACCCGCAACCGCAGGCACGCCGGgccgccgc                   <  1:29161534/68‑1 (MQ=255)
                                                 cgGATTCACCGCCCGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaa                   >  1:17795836‑M1/1‑19 (MQ=255)
                                                 cgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccgc                   <  1:24974184/68‑1 (MQ=255)
                                                 cgGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccgc                   <  1:26416527/68‑1 (MQ=255)
                                                 cgGATTCACCGCCCGGCGTTCTTCTTCTCTCAATACCCCCCGCAACCGCAGGCACGCCGGgccgccgc                   <  1:21589097/68‑1 (MQ=255)
                                                  ggATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGgccgccgcc                  <  1:16582359/68‑1 (MQ=255)
                                                    aTTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCAt                >  1:19409523/1‑68 (MQ=255)
                                                      tCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTc              <  1:13860689/68‑1 (MQ=255)
                                                         ccGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGcc           >  1:4674311/1‑68 (MQ=255)
                                                          ggcCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCacgccgggcggtgaatccggcggt          >  1:11102222‑M2/2‑44 (MQ=255)
                                                          cGCCCGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggt          >  1:26831375‑M1/1‑10 (MQ=255)
                                                          cGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCa          >  1:21072204/1‑68 (MQ=255)
                                                          cGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCa          >  1:5822114/1‑68 (MQ=255)
                                                           gCCCGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaagccggcggtg         >  1:522917‑M1/1‑9 (MQ=255)
                                                            cccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtga        >  1:704772‑M1/1‑8 (MQ=255)
                                                            cccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCAt         >  1:7513962/1‑67 (MQ=255)
                                                             ctggCGTTCTTCATCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCACCGCCATTCGCCATGc       <  1:23824137/66‑1 (MQ=255)
                                                             ccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgat       <  1:15676004‑M1/68‑62 (MQ=255)
                                                             ccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgat       <  1:17012556‑M1/68‑62 (MQ=255)
                                                             ccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgat       >  1:18026413‑M1/1‑7 (MQ=255)
                                                             ccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgat       <  1:6718053‑M1/68‑62 (MQ=255)
                                                             ccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtga        <  1:9608360‑M1/67‑61 (MQ=255)
                                                             ccGGCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtga        <  1:19989630‑M1/67‑61 (MQ=255)
                                                             ccGGCGTgccggcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtga        <  1:9518114‑M1/67‑61 (MQ=255)
                                                             ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc       <  1:19824948/68‑1 (MQ=255)
                                                             ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc       <  1:5152835/68‑1 (MQ=255)
                                                             ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc       <  1:18571754/68‑1 (MQ=255)
                                                             ccGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGc       <  1:18182755/68‑1 (MQ=255)
                                                              cGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCt      <  1:334062/68‑1 (MQ=255)
                                                              cGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCt      <  1:24085131/68‑1 (MQ=255)
                                                              cGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCt      <  1:15358429/68‑1 (MQ=255)
                                                              cGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCt      <  1:25912946/68‑1 (MQ=255)
                                                              cGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCt      >  1:797398/1‑68 (MQ=255)
                                                               ggCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatga     <  1:7305695‑M1/68‑64 (MQ=255)
                                                               ggCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatga     <  1:19230174‑M1/68‑64 (MQ=255)
                                                               ggCGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatga     <  1:20081363‑M1/68‑64 (MQ=255)
                                                                 cGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatgatg   >  1:6759612‑M1/1‑3 (MQ=255)
                                                                 cGTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatgatg   >  1:27251849‑M1/1‑3 (MQ=255)
                                                                 cGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTc   >  1:12042338/1‑68 (MQ=255)
                                                                  gTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatgatga  <  1:23305630‑M1/68‑67 (MQ=255)
                                                                  gTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatgatga  <  1:18747394‑M1/68‑67 (MQ=255)
                                                                  gTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatgatga  <  1:26954598‑M1/68‑67 (MQ=255)
                                                                  gTgcctgcggttgcgggtggtattgacagaagaagaacgccgggcggtgaatccggcggtgatgatga  <  1:21880118‑M1/68‑67 (MQ=255)
                                                                   |                                                                  
CCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTTCTTCTTCTGTCAATACCACCCGCAACCGCAGGCACGCCGGGCCGCCGCCATTCGCCATGCTTTCA  >  CP009273/1821322‑1821455

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.