| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1834892 = | 342 (0.970) | 16 (0.050) | 6/100 | NT | 5.7% | coding (1169/1308 nt) | ynjE | molybdopterin synthase sulfurtransferase |
| ? | CP009273 | 1834923 = | 229 (0.730) | coding (1200/1308 nt) | ynjE | molybdopterin synthase sulfurtransferase | |||||
CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1834962‑1834892‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑a‑‑cgcgcCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAA > CP009273/1834923‑1834988 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAGGGTTTCGGA‑‑C > 1:14616011/1‑67CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:10743041/1‑67CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:23535195/1‑67CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:23010042/1‑67CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:22478300/1‑67CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:3166802/1‑67CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:21903731/1‑67CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:18762469/1‑67CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:18589684/1‑67CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:4228260/1‑67CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:5205189/1‑67CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:6942910/1‑67CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:11904468/1‑67CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:12231974/1‑67CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:7698349/1‑67CCAGCCGCCGTCATACACGGAAACAATCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:5068886/1‑67 GCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC > 1:6949505/1‑68 GCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC > 1:13724072/1‑68 GCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC > 1:8806743/1‑68 GCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG > 1:19906194/1‑67 CCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTAGATAAAGGTTTCGGA‑‑CGCGC > 1:12645697/1‑67 CCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC > 1:19945152/1‑67 CCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC > 1:22864370/1‑67 CCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC > 1:9146021/1‑67 CCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC > 1:3295086/1‑67 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCC < 1:21586337/67‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC < 1:12118562/66‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC < 1:9848937/66‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:2935388/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:26617658/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:8622292/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:9873545/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:14475641/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:14982423/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:16039397/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:17402533/65‑1 CGCCGTCATACACCGAAACATTCTTCCAACCCATCGCGCGTGCCTACATAAAGGTTTCGGA‑‑CGCGC < 1:5096130/66‑1 CGCCGTCATACACAGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCC < 1:23116750/67‑1 taCATAGACGGCAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGC‑‑CGCGCCATGGG < 1:5967050/66‑1 GTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGG < 1:25414387/68‑1 GTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGG < 1:11436392/68‑1 ACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGA < 1:22142078/68‑1 ACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGA < 1:8808675/68‑1 AAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGACGCGCGCCATGGGTTGGAAGA < 1:25170021/67‑1 AAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAAT < 1:21999127/67‑1 ACATTCTTCCAACCCCAGGCGCGTCCGTACATAAAGGTTTCGGC‑‑CGCGCCATGGGTTGGAAGAATGTT < 1:16327811/68‑1 ACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGTT < 1:7523470/68‑1 CTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:18649975/68‑1 CTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:28390376/68‑1 CTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:12478119/68‑1 CTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:108698/68‑1 aTCCAACCCCTCGCGCGGGCGTACATAACGGTATCGGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:15510031/66‑1 TCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGACGCGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:8722786/68‑1 TCCAACCCATGGCGCGTGCGTACATAAAGGTTACGGACGCGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:21985839/68‑1 A‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAA > 1:9032420/1‑68 A‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCA < 1:1367562/67‑1 CGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAA > 1:17742364/1‑68 GCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAA > 1:8503793/1‑68 GCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAA > 1:27107014/1‑68 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1834962‑1834892‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑a‑‑cgcgcCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAA > CP009273/1834923‑1834988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |