| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1834892 = | 342 (0.970) | 16 (0.050) | 6/100 | NT | 5.7% | coding (1169/1308 nt) | ynjE | molybdopterin synthase sulfurtransferase |
| ? | CP009273 | 1834923 = | 229 (0.730) | coding (1200/1308 nt) | ynjE | molybdopterin synthase sulfurtransferase | |||||
Only 100 of 347 total aligned reads displayed.
GCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAAT > CP009273/1834857‑1834989 | gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGcc < 1:11811618/67‑1 (MQ=255) agcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATg > 1:20474526/1‑68 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:249237/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:8604729/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:17621543/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:16513672/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:4395173/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:25495496/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:14243009/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGt > 1:20204924/1‑68 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGt > 1:27180980/1‑68 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGt < 1:28657086/68‑1 (MQ=255) gtcatacacggaaacattcttccaacccatggcgcgtgcgtacataaaggtttcggacgcgcCATggg < 1:11436392‑M2/6‑1 (MQ=255) ttCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTgg < 1:20313762/67‑1 (MQ=255) ttCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGga < 1:15244543/68‑1 (MQ=255) ttCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGga < 1:3496119/68‑1 (MQ=255) acggaaacattcttccaacccatgGCGCGCGTCCGTAACCTTTATGTACGCACGCGCCATGGGTTGga < 1:21985839‑M1/44‑1 (MQ=255) acggaaacattcttccaacccatgGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGga < 1:8722786‑M1/44‑1 (MQ=255) acggaaacattcttccaacccatgGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaag < 1:12478119‑M1/44‑1 (MQ=255) acggaaacattcttccaacccatgGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaag < 1:28390376‑M1/44‑1 (MQ=255) acacggaaacattcttccaacccatggcgcgtgcgtacataaaggtttcggacgcgcCATGGGTTGga < 1:22142078‑M2/11‑1 (MQ=255) aTTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaaga < 1:27062476/68‑1 (MQ=255) aTTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaaga < 1:25381053/68‑1 (MQ=255) tCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt > 1:7398885/1‑68 (MQ=255) tCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt < 1:26581613/68‑1 (MQ=255) tCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt < 1:8323839/68‑1 (MQ=255) cTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATg < 1:8247535/68‑1 (MQ=255) tACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGt < 1:14736909/68‑1 (MQ=255) aacattcttccaacccatgGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGt < 1:7523470‑M1/49‑1 (MQ=255) aaacattcttccaacccatggcgcgtgcgtacataaaggtttcggacgcgcCATGGGTTGGAAGAAt < 1:21999127‑M2/16‑1 (MQ=255) aCTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt > 1:2355414/1‑68 (MQ=255) aCTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt > 1:27615891/1‑68 (MQ=255) aCTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt > 1:6282818/1‑68 (MQ=255) aCTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt < 1:12838468/68‑1 (MQ=255) aCTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt > 1:26260501/1‑68 (MQ=255) aCTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt < 1:16102040/68‑1 (MQ=255) aCTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt > 1:15550883/1‑68 (MQ=255) aCTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt < 1:13632445/68‑1 (MQ=255) aCTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt > 1:5702387/1‑68 (MQ=255) tGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGttt > 1:24437097/1‑67 (MQ=255) gCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTcc > 1:16960984/1‑68 (MQ=255) gCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTcc > 1:26951165/1‑68 (MQ=255) tcttccaacccatgGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGttt < 1:25170021‑M1/53‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:20937416/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:19012013/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt > 1:18937214/1‑68 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt > 1:27904693/1‑68 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:23462587/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt > 1:17803486/1‑68 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:11002863/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACCCACGCGCCATGGCTAGGAAGAAAGTTTCCgt > 1:3063539/1‑68 (MQ=255) tccaacccatgGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgtgt < 1:8808675‑M1/57‑1 (MQ=255) cttccaacccatggcgcgtgcgtacataaaggtttcggacgcgcCATGGGTTGGAAGAATGTTTCCgt < 1:18649975‑M2/24‑1 (MQ=255) cACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTGTCCgtgt > 1:14660102/1‑68 (MQ=255) cTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcg > 1:22972684/1‑68 (MQ=255) gGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCTGTGTATGAcggcg < 1:23116750‑M1/66‑1 (MQ=255) gGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg < 1:21586337‑M1/66‑1 (MQ=255) GCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcgg > 1:22864370‑M1/1‑67 (MQ=255) GCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcgg > 1:9146021‑M1/1‑67 (MQ=255) GCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg < 1:9848937‑M1/66‑1 (MQ=255) GCGCG‑‑TCCGAAACCTTTATCTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcgg > 1:12645697‑M1/1‑67 (MQ=255) CGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg < 1:14475641‑M1/65‑1 (MQ=255) CGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg < 1:14982423‑M1/65‑1 (MQ=255) G‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGATTGTTTCCGTGTATGACGGCGGCTgg > 1:5068886‑M1/1‑67 (MQ=255) G‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTgg > 1:22478300‑M1/1‑67 (MQ=255) G‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTgg > 1:6942910‑M1/1‑67 (MQ=255) gAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGa < 1:14013261/68‑1 (MQ=255) aaCCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAAt > 1:8459190/1‑68 (MQ=255) ccTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATgg > 1:10799015/1‑68 (MQ=255) ccTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATgg > 1:6827961/1‑68 (MQ=255) ccTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATgg > 1:28240012/1‑68 (MQ=255) cTTTCTGTACGCCCGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGa < 1:24033125/68‑1 (MQ=255) cTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGa < 1:4680531/68‑1 (MQ=255) cTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGa < 1:5164608/68‑1 (MQ=255) tATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGagca > 1:12026379/1‑68 (MQ=255) tGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGagcagc > 1:10013788/1‑68 (MQ=255) tGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGagcagc > 1:12271812/1‑68 (MQ=255) tGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGagcagc > 1:21112278/1‑68 (MQ=255) gTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCg > 1:1026582/1‑68 (MQ=255) gTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCg > 1:18520587/1‑68 (MQ=255) gTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCg > 1:25935992/1‑68 (MQ=255) gTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCg > 1:13758250/1‑68 (MQ=255) gTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCg > 1:13162639/1‑68 (MQ=255) gTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCg > 1:7708514/1‑68 (MQ=255) acgcacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGa > 1:608428/1‑67 (MQ=255) acgcacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGAt < 1:18147780/68‑1 (MQ=255) acgcacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGAt < 1:17324368/68‑1 (MQ=255) cgcacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGAt > 1:18437376/1‑67 (MQ=255) cgcacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGC‑GCTGGTACGAATGGAGCAGCGATcc > 1:15861759/1‑68 (MQ=255) cacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCa > 1:25887041/1‑68 (MQ=255) cacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCa > 1:26715785/1‑68 (MQ=255) cacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCa > 1:23645240/1‑68 (MQ=255) cacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCa > 1:13092541/1‑68 (MQ=255) cacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCa > 1:18008440/1‑68 (MQ=255) cacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCa > 1:3714008/1‑68 (MQ=255) cacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCa > 1:29164694/1‑68 (MQ=255) acgcgcCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCaa > 1:9032420‑M2/7‑68 (MQ=255) cATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAAt < 1:21466941/67‑1 (MQ=255) cATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAAt < 1:19934924/67‑1 (MQ=255) cATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAAt > 1:24165589/1‑67 (MQ=255) | GCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAAT > CP009273/1834857‑1834989 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |