| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2499292 | 352 (1.000) | 19 (0.060) | 10/98 | NT | 5.6% | coding (820/1086 nt) | ypdF | Xaa‑Pro aminopeptidase |
| ? | CP009273 | = 2499321 | 338 (1.090) | coding (791/1086 nt) | ypdF | Xaa‑Pro aminopeptidase | |||||
CTTCAATGCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2499220‑2499292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccggcgTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACTATT < CP009273/2499321‑2499256 CTTCAATGCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGAC > 1:12831883/1‑67CTTCAATGCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGAC > 1:28559913/1‑67 TTCAATGCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCC > 1:17693476/1‑68 TTCAATGCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCC > 1:20943448/1‑68 AATGCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGC > 1:153617/1‑68 AATGCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGC < 1:8440669/68‑1 ATGCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGC > 1:1682790/1‑67 GTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGTGCGCTGCCA > 1:11497754/1‑67 CCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGTGCGGTGGCAGCAGG > 1:16657561/1‑68 TGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGTGCGCTGCCCGCAGGTTGACGAT > 1:3307655/1‑67 TGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCGTGCGCTGCCAGCAGGTTGACGAT > 1:16618695/1‑67 TCGCCATAACCTGCTTCTGTAATGACCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGG > 1:17719751/1‑68 CGCCATAACCTGCTTCTGTAATGACCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGG > 1:11505387/1‑67 ACCTGCTTCTGTAATGACCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACA > 1:25418605/1‑68 CCTGCTTCTGTAATGACCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAG > 1:25836035/1‑68 CCTGCTTCTGTAATGACCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAG > 1:25419136/1‑68 CTGCTTCTGTAATGACCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGA > 1:25819822/1‑68 CTGCTTCTGTAATGACCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGA > 1:22385000/1‑68 CTGCTTCTGTAATGACCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGA > 1:3893248/1‑68 TCTGTAATGACCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGCAGCAG > 1:8769790/1‑68 TCTGTAATGACCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAG > 1:11511617/1‑68 TCTGTAATGACCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAG > 1:2702155/1‑68 TCTGTAATGACCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAG > 1:5186450/1‑68 TCTGTAATGACCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAG > 1:15890309/1‑68 TCTGTAATGACCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAG > 1:7541602/1‑68 TGTAATGACCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGT > 1:15898426/1‑68 TGACCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATG > 1:24791373/1‑67 CCCGGCGTGCGCTGCCAGCAGGTTGACGCTGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATTGCG < 1:22655388/67‑1 CCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTTCAGAAGCAGGTTATGGCG > 1:10071591/1‑67 CCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGA < 1:6107817/68‑1 CCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCG < 1:5957549/67‑1 CCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCG > 1:10058547/1‑67 CCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCG < 1:3389025/67‑1 CCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCG > 1:17204275/1‑67 CCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCG < 1:3525278/67‑1 CCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCG > 1:3538033/1‑67 CCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCG < 1:20508853/67‑1 CCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCG > 1:20672556/1‑67 CCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCG > 1:23291288/1‑67 CCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCG < 1:22581526/67‑1 CCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCG < 1:13645269/67‑1 CCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCG > 1:22868011/1‑67 CCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCG > 1:7530154/1‑67 CCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCG > 1:7376455/1‑67 CCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCG > 1:10248111/1‑66 CCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCG > 1:27328603/1‑66 CCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCG > 1:7529511/1‑66 CCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCG > 1:27655676/1‑66 CGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACT < 1:13043184/68‑1 CGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACT < 1:527675/68‑1 CGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGGTATGGCGACT < 1:23360080/68‑1 CGGCGGGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACCGAAGCAGGTTATGGCGACT < 1:8591280/68‑1 GGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACTt > 1:26237121/1‑67 GGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACTA > 1:21662123/1‑68 CGTGCGCTGCCAGCAGGTTGCCGATGCCGCGCGCCGGGTCAGTACAGAAGCAGGTTATGGCGACTATT > 1:27231272/1‑68 CGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACTATT > 1:18632720/1‑68 CGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACTATT > 1:8416352/1‑68 CGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACTATT > 1:27306406/1‑68 CGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACTATT > 1:28686634/1‑68 CGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACTAT < 1:25961399/67‑1 CGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACTAT < 1:271291/67‑1 CGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACTAT < 1:24781150/67‑1 CGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACTAT < 1:16143429/67‑1 CGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACTAT < 1:28265152/67‑1 CGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACTAT < 1:8196837/67‑1 CGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACTAT < 1:29005884/67‑1 CGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACTAT < 1:17172771/67‑1 CGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACTAT < 1:12545153/67‑1 GTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACTATT > 1:8401646/1‑67 CTTCAATGCCGATAGCGTGACCGGTGTTATGACCGAAATAGTCGCCATAACCTGCTTCTGTAATGACCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2499220‑2499292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccggcgTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACTATT < CP009273/2499321‑2499256 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |