| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2543932 | 242 (0.690) | 15 (0.050) | 9/94 | NT | 6.4% | intergenic (‑28/+68) | yfeX/yfeY | porphyrinogen oxidase, cytoplasmic/RpoE‑regulated lipoprotein |
| ? | CP009273 | = 2543937 | 239 (0.810) | intergenic (‑33/+63) | yfeX/yfeY | porphyrinogen oxidase, cytoplasmic/RpoE‑regulated lipoprotein | |||||
Only 100 of 123 total aligned reads displayed.
GCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2543858‑2543932‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatgccacgGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGAAC < CP009273/2543937‑2543871 GCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAA > 1:10514555/1‑68GCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAA > 1:22149284/1‑68 CGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAAT < 1:1959385/67‑1 CGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAAT < 1:23211602/67‑1 CGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAAT < 1:2569053/67‑1 CGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAAT < 1:14096758/67‑1 CGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAAT < 1:13629388/67‑1 GCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGC < 1:22179280/68‑1 GCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGC < 1:26982701/68‑1 GCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCA < 1:1977759/68‑1 GCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCA < 1:4792929/68‑1 GCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCC > 1:15958180/1‑67 GGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACG < 1:5197485/68‑1 GGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACG < 1:22111815/68‑1 GGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACG < 1:13878114/68‑1 GGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCAC < 1:22241164/67‑1 GGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCAC < 1:25661881/67‑1 GGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCAC < 1:26280996/67‑1 GGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCAC < 1:6909702/67‑1 GGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCAC < 1:6518162/67‑1 GGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCAC < 1:2857528/67‑1 GGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCAC < 1:28791750/67‑1 TCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGGATTGCGTGGCATTATTTTTTTCA > 1:15615970/1‑68 ACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGGATTGCGTGGGATTTTTATTTTCAGGAGG > 1:14398596/1‑68 CCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGA > 1:10574352/1‑68 AGACATTGTTCCTCCTGAAAATAATAATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAA > 1:14784328/1‑68 AGACATTGTTCCTCCTGAAAATAATAATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAA > 1:29077912/1‑68 ACATTGTTCCTCCTGAAAATAATAATGCCACGGATTGCGTGGCAGTATTATTTTCAGGAGGAACAATG > 1:23076850/1‑68 TTCCTCCTGAAAATAATAATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAG > 1:13449573/1‑68 TCCTCCTGAAAATAATAATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGG > 1:17585986/1‑68 TCCTCCTGAAAATAATAATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGG > 1:8127383/1‑68 TCCTGAAAATAATAATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGT > 1:4001058/1‑66 AATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTT > 1:25210480/1‑68 AATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTT > 1:7504210/1‑68 tTGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTG < 1:8413787/67‑1 cTGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTG < 1:1668862/67‑1 ATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTG < 1:9071563/68‑1 ATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTG < 1:9563219/68‑1 ATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTG < 1:23726508/68‑1 ATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTG < 1:24609082/68‑1 ATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTG < 1:27205399/68‑1 ATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTG < 1:2785021/68‑1 ATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTG < 1:4733960/68‑1 ATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTG < 1:12420493/68‑1 ATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTG < 1:1798124/68‑1 ATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTG < 1:11747769/68‑1 ATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTG < 1:19545643/68‑1 ATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTT > 1:10955754/1‑67 ATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTT > 1:2596801/1‑67 ATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTT > 1:21864582/1‑67 ATGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTT > 1:6952963/1‑67 TGCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGC < 1:7330823/68‑1 GCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCC > 1:6909213/1‑68 GCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCC > 1:6544597/1‑68 GCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCC > 1:4176219/1‑68 GCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCC > 1:3774624/1‑68 GCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCC > 1:3753485/1‑68 GCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCC > 1:13245229/1‑68 GCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCC > 1:13813513/1‑68 GCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCC > 1:2782523/1‑68 GCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCC > 1:14038701/1‑68 GCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCC > 1:21098623/1‑68 GCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCC > 1:1901875/1‑68 GCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCC > 1:16514925/1‑68 GCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCC > 1:15867619/1‑68 GCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCC > 1:16314969/1‑68 GCCACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTCGCC > 1:16390038/1‑68 GCCACGGATTACGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCC > 1:4305804/1‑68 CACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAG > 1:29139818/1‑68 CACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAG > 1:11440557/1‑68 CACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAG > 1:18852825/1‑68 CACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATGTTGCCAG > 1:13464129/1‑68 ACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGA < 1:623748/68‑1 ACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGA < 1:19775173/68‑1 ACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGA < 1:10895211/68‑1 ACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGA < 1:5503903/68‑1 ACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGA > 1:18180597/1‑68 ACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGA < 1:1069497/68‑1 ACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGA < 1:11063915/68‑1 ACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGA < 1:11932384/68‑1 ACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGA < 1:22374823/68‑1 ACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGA > 1:24173459/1‑68 ACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGA < 1:10190258/68‑1 ACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGA < 1:16027990/68‑1 ACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGA < 1:14730019/68‑1 ACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGA < 1:26734657/68‑1 ACGGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGA < 1:15124544/68‑1 GGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGAAC < 1:8738741/68‑1 GGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGAAC > 1:8908028/1‑68 GGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGAAC > 1:10447336/1‑68 GGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGAAC > 1:1510780/1‑68 GGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGAAC > 1:21827802/1‑68 GGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGAAC < 1:6171959/68‑1 GGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGAAC > 1:5988933/1‑68 GGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGAAC > 1:11884817/1‑68 GGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGAAC < 1:24038702/68‑1 GGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGAAC > 1:12559181/1‑68 GGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGAAC > 1:28089507/1‑68 GGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAAAGTGGCATTTTGCCAGAAC > 1:21299368/1‑68 GGATTGCGTGGCATTATTATTTTCAAGAGGAACAATGTCTCAGGTGCAGAGTGGCATTTTGCCAGAAC > 1:5068350/1‑68 GCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2543858‑2543932‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatgccacgGATTGCGTGGCATTATTATTTTCAGGAGGAACAATGTCTCAGGTTCAGAGTGGCATTTTGCCAGAAC < CP009273/2543937‑2543871 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |