| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2543932 | 242 (0.690) | 15 (0.050) | 9/94 | NT | 6.4% | intergenic (‑28/+68) | yfeX/yfeY | porphyrinogen oxidase, cytoplasmic/RpoE‑regulated lipoprotein |
| ? | CP009273 | = 2543937 | 239 (0.810) | intergenic (‑33/+63) | yfeX/yfeY | porphyrinogen oxidase, cytoplasmic/RpoE‑regulated lipoprotein | |||||
Only 100 of 476 total aligned reads displayed.
GGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAA > CP009273/2543865‑2543999 | aaTGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCaa < 1:26754344/68‑1 (MQ=255) aTGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATTCCACGCAAt < 1:15705663/68‑1 (MQ=255) aTGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAAt < 1:23087768/68‑1 (MQ=255) aTGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAAt < 1:28319099/68‑1 (MQ=255) aTGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAAt < 1:43505/68‑1 (MQ=255) aTGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAAt < 1:17302757/68‑1 (MQ=255) aTGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAAt < 1:22350313/68‑1 (MQ=255) tGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTTAAAATAATAATGCCACGCAATc < 1:14338202/68‑1 (MQ=255) gTTCTGGCAAAATGCCACTTTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCc > 1:21299368‑M2/1‑67 (MQ=255) gTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCc > 1:12559181‑M2/1‑67 (MQ=255) gTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCc > 1:21827802‑M2/1‑67 (MQ=255) gTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCc > 1:5988933‑M2/1‑67 (MQ=255) gTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCc < 1:6171959‑M2/68‑2 (MQ=255) tCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCcgt < 1:1069497‑M2/68‑4 (MQ=255) tCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCcgt < 1:17097019‑M2/68‑4 (MQ=255) tCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCcgt < 1:10895211‑M2/68‑4 (MQ=255) tCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCcgt < 1:16027990‑M2/68‑4 (MQ=255) tCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCcgt < 1:15124544‑M2/68‑4 (MQ=255) tCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCcgt < 1:14730019‑M2/68‑4 (MQ=255) cTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCcgtg > 1:2273667‑M2/1‑64 (MQ=255) ggCGAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCcgtggc > 1:16390038‑M2/1‑62 (MQ=255) ggCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCcgtggc > 1:14038701‑M2/1‑62 (MQ=255) ggCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCcgtggc > 1:13813513‑M2/1‑62 (MQ=255) ggCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCcgtggc > 1:6427250‑M2/1‑62 (MQ=255) ggCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCcgtggc > 1:21946607‑M2/1‑62 (MQ=255) ggCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCcgtggc > 1:4176219‑M2/1‑62 (MQ=255) cAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCcgtggcag < 1:1668862‑M2/68‑9 (MQ=255) cAAAATGCCACTCTGAACCTGAGACATTGGTCCTCCTGAAAAGAATAATGCCAGGCAATCcgtggcat < 1:5251538‑M2/68‑9 (MQ=255) aaaaTGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCcgtggcatt > 1:7504210‑M2/1‑59 (MQ=255) tGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCAttgttg > 1:20599226/1‑68 (MQ=255) gCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGa < 1:13502180/68‑1 (MQ=255) cACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAgc < 1:20391437/68‑1 (MQ=255) tctGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGgattgcgtggcattattattttca > 1:25677023‑M1/1‑44 (MQ=255) tctGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCt > 1:10448822/1‑68 (MQ=255) ctGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTa < 1:9418872/68‑1 (MQ=255) gAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTAtt < 1:19802154/68‑1 (MQ=255) aCCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTAtttt > 1:4597769/1‑68 (MQ=255) ccTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCcgtggcattattattttcaggagga > 1:17585986‑M2/1‑43 (MQ=255) ccTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTAtttt > 1:3821208/1‑67 (MQ=255) ccTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTAtttt > 1:3998887/1‑67 (MQ=255) ccTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTAtttt > 1:25805471/1‑67 (MQ=255) ccTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTAtttt > 1:14206286/1‑67 (MQ=255) ccTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTAtttt > 1:11381697/1‑67 (MQ=255) ccTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTAtttt > 1:10140298/1‑67 (MQ=255) agaCATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACgtg > 1:29232283/1‑68 (MQ=255) agaCATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACgtg > 1:27433032/1‑68 (MQ=255) agaCATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACgtg > 1:6923710/1‑68 (MQ=255) agaCATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACgtg > 1:7900952/1‑68 (MQ=255) agaCATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACgtg > 1:11654996/1‑68 (MQ=255) aCATTGTTCCTCCTGAAAATAATAATGCCACGgattgcgtggcattattattttcaggaggaacaatg > 1:19544560‑M1/1‑32 (MQ=255) cATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGttt > 1:10206878/1‑68 (MQ=255) cATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGttt > 1:7381582/1‑68 (MQ=255) ttGTTCCTCCTGAAAATAATAATGCCACGCAATCcgtggcattattattttcaggaggaacaatgtct > 1:29077912‑M2/1‑34 (MQ=255) ttGTTCCTCCTGAAAATAATAATGCCACGCAATCcgtggcattattattttcaggaggaacaatgtct > 1:13105846‑M2/1‑34 (MQ=255) tGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGttttt > 1:19664775/1‑67 (MQ=255) tGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGttttt > 1:6675300/1‑67 (MQ=255) ttCCTCCTGAAAATAATAATGCCACGgattgcgtggcattattattttcaggaggaacaatgtctcag > 1:13449573‑M1/1‑26 (MQ=255) tcctccTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTcgc > 1:9187751/1‑68 (MQ=255) tcctccTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTcgc > 1:18588903/1‑68 (MQ=255) cctcctGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTcgcg > 1:3130865/1‑68 (MQ=255) tcctGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCgcggc > 1:23009927/1‑68 (MQ=255) tcctGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCgcggc > 1:1186805/1‑68 (MQ=255) tcctGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCgcggc < 1:16247782/68‑1 (MQ=255) tcctGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCgcggc > 1:18133929/1‑68 (MQ=255) aaaTAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGcggcggcgg < 1:8779894/67‑1 (MQ=255) aaaTAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGt > 1:3385744/1‑68 (MQ=255) ataataatGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGttt > 1:23975162/1‑68 (MQ=255) ataatGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGt > 1:21122859/1‑67 (MQ=255) ataatGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGt > 1:26221213/1‑67 (MQ=255) ataatGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGt > 1:7120744/1‑67 (MQ=255) ataatGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGt > 1:8527144/1‑67 (MQ=255) aatGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCa > 1:18180634/1‑68 (MQ=255) atGCCACGgattgcgtggcattattattttcaggaggaacaatgtctcaggttcagagtggcattttg < 1:12420493‑M1/68‑61 (MQ=255) atGCCACGgattgcgtggcattattattttcaggaggaacaatgtctcaggttcagagtggcattttg < 1:23726508‑M1/68‑61 (MQ=255) atGCCACGgattgcgtggcattattattttcaggaggaacaatgtctcaggttcagagtggcattttg < 1:2785021‑M1/68‑61 (MQ=255) atGCCACGgattgcgtggcattattattttcaggaggaacaatgtctcaggttcagagtggcattttg < 1:1798124‑M1/68‑61 (MQ=255) atGCCACGgattgcgtggcattattattttcaggaggaacaatgtctcaggttcagagtggcattttg < 1:24609082‑M1/68‑61 (MQ=255) atGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAg > 1:8278281/1‑68 (MQ=255) gCCACGgattgcgtggcattattattttcaggaggaacaatgtctcaggttcagagtggcattttgcc > 1:1901875‑M1/1‑6 (MQ=255) gCCACGgattgcgtggcattattattttcaggaggaacaatgtctcaggttcagagtggcattttgcc > 1:3753485‑M1/1‑6 (MQ=255) gCCACGgattgcgtggcattattattttcaggaggaacaatgtctcaggttcagagtggcattttgcc > 1:27165679‑M1/1‑6 (MQ=255) gCCACGgattgcgtggcattattattttcaggaggaacaatgtctcaggttcagagtggcattttgcc > 1:6544597‑M1/1‑6 (MQ=255) gCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGAc > 1:2510069/1‑68 (MQ=255) gCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGAc > 1:25401869/1‑68 (MQ=255) gCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGAc > 1:2021534/1‑68 (MQ=255) gCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGAc > 1:14924507/1‑68 (MQ=255) gCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGAc < 1:5819309/68‑1 (MQ=255) gCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGAc > 1:15561601/1‑68 (MQ=255) gCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGAc > 1:5020846/1‑68 (MQ=255) gCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTATGTTCAGAc > 1:4735687/1‑68 (MQ=255) gCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTATCGCGGCGGCGGTTAGTTCAGAc > 1:20834518/1‑68 (MQ=255) aCGgattgcgtggcattattattttcaggaggaacaatgtctcaggttcagagtggcattttgccaga > 1:24173459‑M1/1‑3 (MQ=255) aCGgattgcgtggcattattattttcaggaggaacaatgtctcaggttcagagtggcattttgccaga < 1:11063915‑M1/68‑66 (MQ=255) aCGgattgcgtggcattattattttcaggaggaacaatgtctcaggttcagagtggcattttgccaga < 1:11932384‑M1/68‑66 (MQ=255) aCGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCa < 1:14602673/68‑1 (MQ=255) aCGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCa < 1:28662687/68‑1 (MQ=255) ggattgcgtggcattattattttcaggaggaacaatgtctcaggttcagagtggcattttgccagaac > 1:8908028‑M1/1‑1 (MQ=255) ggattgcgtggcattattattttcaggaggaacaatgtctcaggttcagagtggcattttgccagaac > 1:28089507‑M1/1‑1 (MQ=255) gCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCaaa < 1:24724421/68‑1 (MQ=255) gCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCaaa > 1:27650485/1‑68 (MQ=255) | GGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAA > CP009273/2543865‑2543999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |